CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = E41L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a41E41LnonsynGAgTTg61310.50819727514-27516
ORF7a41E41LnonsynGAGCTT61130.21311527514-27516
ORF7a41E41LnonsynGAgCTg6160.098360727514-27516
ORF7a41E41LnonsynGAGTTA6160.098360727514-27516
ORF7a41E41LnonsynGAGCTA6140.065573827514-27516
ORF7a41E41LnonsynGAGCTC6110.016393427514-27516

Details of the mutation E41L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a41E41LGAgTTg3161All0.000006
ORF7a41E41LGAGCTT1361All0.000002
ORF7a41E41LGAGTTA661All0.000001
ORF7a41E41LGAgCTg661All0.000001
ORF7a41E41LGAGCTA461All0.000001
ORF7a41E41LGAGCTC161All0
ORF7a41E41LGAgTTg2222AY.1130.003133
ORF7a41E41LGAGCTT412B.10.000037
ORF7a41E41LGAgTTg312B.10.000027
ORF7a41E41LGAgCTg312B.10.000027
ORF7a41E41LGAGTTA112B.10.000009
ORF7a41E41LGAGCTA112B.10.000009
ORF7a41E41LGAGCTT311AY.250.000018
ORF7a41E41LGAGCTA311AY.250.000018
ORF7a41E41LGAgCTg211AY.250.000012
ORF7a41E41LGAGTTA211AY.250.000012
ORF7a41E41LGAGCTC111AY.250.000006
ORF7a41E41LGAGCTT66B.1.617.20.000023
ORF7a41E41LGAgTTg33AY.1110.000549
ORF7a41E41LGAGTTA12B.1.1600.000031
ORF7a41E41LGAgTTg12B.1.1600.000031
ORF7a41E41LGAgTTg11AY.30.00001
ORF7a41E41LGAGTTA11B.1.1.70.000001
ORF7a41E41LGAgTTg11B.1.1770.000013
ORF7a41E41LGAgCTg11B.1.4170.028571
ORF7a41E41LGAGTTA11B.1.5760.000907