CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF7a | 58 | C58del | del | TGC | --- | 28429 | 28429 | 1 | 27565-27567 |
Details of the mutation C58del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF7a | 58 | C58del | TGC | --- | 28429 | 28429 | All | 0.005437 |
ORF7a | 58 | C58del | TGC | --- | 11832 | 11832 | AY.4 | 0.018416 |
ORF7a | 58 | C58del | TGC | --- | 3199 | 3199 | B.1.617.2 | 0.012046 |
ORF7a | 58 | C58del | TGC | --- | 2022 | 2022 | B.1.1.7 | 0.00181 |
ORF7a | 58 | C58del | TGC | --- | 1666 | 1666 | AY.120.1 | 0.534831 |
ORF7a | 58 | C58del | TGC | --- | 1527 | 1527 | AY.25 | 0.009185 |
ORF7a | 58 | C58del | TGC | --- | 857 | 857 | AY.43 | 0.003797 |
ORF7a | 58 | C58del | TGC | --- | 609 | 609 | AY.103 | 0.003781 |
ORF7a | 58 | C58del | TGC | --- | 437 | 437 | AY.44 | 0.00266 |
ORF7a | 58 | C58del | TGC | --- | 435 | 435 | AY.3 | 0.004327 |
ORF7a | 58 | C58del | TGC | --- | 433 | 433 | AY.26 | 0.012258 |
ORF7a | 58 | C58del | TGC | --- | 380 | 380 | AY.39 | 0.00939 |
ORF7a | 58 | C58del | TGC | --- | 314 | 314 | AY.102 | 0.008325 |
ORF7a | 58 | C58del | TGC | --- | 259 | 259 | AY.29 | 0.004085 |
ORF7a | 58 | C58del | TGC | --- | 202 | 202 | B.1.351 | 0.006005 |
ORF7a | 58 | C58del | TGC | --- | 199 | 199 | AY.120 | 0.007399 |
ORF7a | 58 | C58del | TGC | --- | 193 | 193 | AY.4.2 | 0.004186 |
ORF7a | 58 | C58del | TGC | --- | 184 | 184 | B.1.177.21 | 0.014071 |
ORF7a | 58 | C58del | TGC | --- | 172 | 172 | AY.98 | 0.013587 |
ORF7a | 58 | C58del | TGC | --- | 120 | 120 | AY.119 | 0.004237 |
ORF7a | 58 | C58del | TGC | --- | 118 | 118 | AY.7.1 | 0.013299 |
ORF7a | 58 | C58del | TGC | --- | 117 | 117 | AY.47 | 0.003639 |
ORF7a | 58 | C58del | TGC | --- | 117 | 117 | B.1 | 0.001072 |
ORF7a | 58 | C58del | TGC | --- | 116 | 116 | AY.100 | 0.005337 |
ORF7a | 58 | C58del | TGC | --- | 116 | 116 | B.1.526 | 0.002727 |
ORF7a | 58 | C58del | TGC | --- | 97 | 97 | B.1.177 | 0.001277 |
ORF7a | 58 | C58del | TGC | --- | 89 | 89 | AY.46.4 | 0.014641 |
ORF7a | 58 | C58del | TGC | --- | 80 | 80 | AY.33 | 0.005342 |
ORF7a | 58 | C58del | TGC | --- | 80 | 80 | B.1.2 | 0.000704 |
ORF7a | 58 | C58del | TGC | --- | 72 | 72 | AY.46.6 | 0.005199 |
ORF7a | 58 | C58del | TGC | --- | 70 | 70 | AY.5 | 0.001445 |
ORF7a | 58 | C58del | TGC | --- | 62 | 62 | AY.3.1 | 0.005286 |
ORF7a | 58 | C58del | TGC | --- | 60 | 60 | AY.45 | 0.007301 |
ORF7a | 58 | C58del | TGC | --- | 58 | 58 | AY.39.1 | 0.002298 |
ORF7a | 58 | C58del | TGC | --- | 57 | 57 | AY.75 | 0.003193 |
ORF7a | 58 | C58del | TGC | --- | 56 | 56 | AY.113 | 0.007974 |
ORF7a | 58 | C58del | TGC | --- | 56 | 56 | AY.42 | 0.002253 |
ORF7a | 58 | C58del | TGC | --- | 54 | 54 | AY.6 | 0.002221 |
ORF7a | 58 | C58del | TGC | --- | 52 | 52 | AY.23 | 0.003627 |
ORF7a | 58 | C58del | TGC | --- | 51 | 51 | AY.20 | 0.001982 |
ORF7a | 58 | C58del | TGC | --- | 50 | 50 | AY.46 | 0.005204 |
ORF7a | 58 | C58del | TGC | --- | 49 | 49 | B.1.621 | 0.004337 |
ORF7a | 58 | C58del | TGC | --- | 49 | 49 | P.1 | 0.000772 |
ORF7a | 58 | C58del | TGC | --- | 47 | 47 | AY.54 | 0.004481 |
ORF7a | 58 | C58del | TGC | --- | 47 | 47 | B.1.1.284 | 0.005048 |
ORF7a | 58 | C58del | TGC | --- | 45 | 45 | AY.107 | 0.020969 |
ORF7a | 58 | C58del | TGC | --- | 44 | 44 | AY.13 | 0.007083 |
ORF7a | 58 | C58del | TGC | --- | 37 | 37 | AY.98.1 | 0.001792 |
ORF7a | 58 | C58del | TGC | --- | 36 | 36 | AY.110 | 0.004057 |
ORF7a | 58 | C58del | TGC | --- | 36 | 36 | AY.118 | 0.002255 |
ORF7a | 58 | C58del | TGC | --- | 32 | 32 | AY.9 | 0.002163 |
ORF7a | 58 | C58del | TGC | --- | 31 | 31 | AY.34 | 0.003006 |
ORF7a | 58 | C58del | TGC | --- | 31 | 31 | AY.7 | 0.006076 |
ORF7a | 58 | C58del | TGC | --- | 30 | 30 | AY.91 | 0.021914 |
ORF7a | 58 | C58del | TGC | --- | 30 | 30 | B.1.1 | 0.000544 |
ORF7a | 58 | C58del | TGC | --- | 30 | 30 | B.1.1.214 | 0.001664 |
ORF7a | 58 | C58del | TGC | --- | 29 | 29 | AY.9.2 | 0.001065 |
ORF7a | 58 | C58del | TGC | --- | 28 | 28 | AY.117 | 0.002366 |
ORF7a | 58 | C58del | TGC | --- | 28 | 28 | AY.60 | 0.026266 |
ORF7a | 58 | C58del | TGC | --- | 28 | 28 | AY.99.2 | 0.00258 |
ORF7a | 58 | C58del | TGC | --- | 25 | 25 | AY.19 | 0.028506 |
ORF7a | 58 | C58del | TGC | --- | 24 | 24 | AY.7.2 | 0.013423 |
ORF7a | 58 | C58del | TGC | --- | 24 | 24 | AY.9.1 | 0.002009 |
ORF7a | 58 | C58del | TGC | --- | 23 | 23 | AY.30 | 0.009102 |
ORF7a | 58 | C58del | TGC | --- | 21 | 21 | AY.36 | 0.003112 |
ORF7a | 58 | C58del | TGC | --- | 21 | 21 | AY.61 | 0.0022 |
ORF7a | 58 | C58del | TGC | --- | 20 | 20 | AY.121 | 0.002706 |
ORF7a | 58 | C58del | TGC | --- | 19 | 19 | AY.106 | 0.006363 |
ORF7a | 58 | C58del | TGC | --- | 19 | 19 | B.1.637 | 0.001388 |
ORF7a | 58 | C58del | TGC | --- | 17 | 17 | AY.4.5 | 0.001827 |
ORF7a | 58 | C58del | TGC | --- | 17 | 17 | AY.74 | 0.001966 |
ORF7a | 58 | C58del | TGC | --- | 17 | 17 | B.1.427 | 0.000858 |
ORF7a | 58 | C58del | TGC | --- | 17 | 17 | B.1.429 | 0.0004 |
ORF7a | 58 | C58del | TGC | --- | 17 | 17 | R.1 | 0.00153 |
ORF7a | 58 | C58del | TGC | --- | 16 | 16 | AY.1 | 0.006332 |
ORF7a | 58 | C58del | TGC | --- | 16 | 16 | B.1.160 | 0.000499 |
ORF7a | 58 | C58del | TGC | --- | 16 | 16 | C.37 | 0.001857 |
ORF7a | 58 | C58del | TGC | --- | 15 | 15 | AY.116 | 0.004302 |
ORF7a | 58 | C58del | TGC | --- | 15 | 15 | B.1.1.222 | 0.00306 |
ORF7a | 58 | C58del | TGC | --- | 14 | 14 | AY.111 | 0.002564 |
ORF7a | 58 | C58del | TGC | --- | 14 | 14 | AY.114 | 0.003235 |
ORF7a | 58 | C58del | TGC | --- | 14 | 14 | AY.46.2 | 0.008895 |
ORF7a | 58 | C58del | TGC | --- | 14 | 14 | B.1.1.258 | 0.045603 |
ORF7a | 58 | C58del | TGC | --- | 14 | 14 | B.1.243 | 0.000974 |
ORF7a | 58 | C58del | TGC | --- | 14 | 14 | B.1.596 | 0.00122 |
ORF7a | 58 | C58del | TGC | --- | 13 | 13 | AY.14 | 0.001144 |
ORF7a | 58 | C58del | TGC | --- | 13 | 13 | AY.37 | 0.004109 |
ORF7a | 58 | C58del | TGC | --- | 13 | 13 | AY.68 | 0.003559 |
ORF7a | 58 | C58del | TGC | --- | 12 | 12 | AY.84 | 0.005249 |
ORF7a | 58 | C58del | TGC | --- | 12 | 12 | B.1.324 | 0.019262 |
ORF7a | 58 | C58del | TGC | --- | 11 | 11 | AY.4.2.1 | 0.001639 |
ORF7a | 58 | C58del | TGC | --- | 11 | 11 | AY.87 | 0.009159 |
ORF7a | 58 | C58del | TGC | --- | 11 | 11 | AY.99 | 0.011542 |
ORF7a | 58 | C58del | TGC | --- | 10 | 10 | AY.12 | 0.003161 |
ORF7a | 58 | C58del | TGC | --- | 10 | 10 | AY.35 | 0.00233 |
ORF7a | 58 | C58del | TGC | --- | 10 | 10 | AY.5.4 | 0.002767 |
ORF7a | 58 | C58del | TGC | --- | 10 | 10 | AY.90 | 0.006845 |
ORF7a | 58 | C58del | TGC | --- | 10 | 10 | B.1.525 | 0.001132 |
ORF7a | 58 | C58del | TGC | --- | 10 | 10 | Q.8 | 0.001649 |
ORF7a | 58 | C58del | TGC | --- | 9 | 9 | AY.109 | 0.006657 |
ORF7a | 58 | C58del | TGC | --- | 9 | 9 | AY.62 | 0.003922 |
ORF7a | 58 | C58del | TGC | --- | 9 | 9 | B.1.1.519 | 0.000357 |
ORF7a | 58 | C58del | TGC | --- | 9 | 9 | B.1.258.9 | 0.045 |
ORF7a | 58 | C58del | TGC | --- | 9 | 9 | L.1 | 0.017143 |
ORF7a | 58 | C58del | TGC | --- | 8 | 8 | AY.10 | 0.00424 |
ORF7a | 58 | C58del | TGC | --- | 8 | 8 | AY.27 | 0.000518 |
ORF7a | 58 | C58del | TGC | --- | 8 | 8 | AY.29.1 | 0.001764 |
ORF7a | 58 | C58del | TGC | --- | 8 | 8 | B.1.1.231 | 0.024768 |
ORF7a | 58 | C58del | TGC | --- | 8 | 8 | P.1.14 | 0.000382 |
ORF7a | 58 | C58del | TGC | --- | 8 | 8 | P.1.15 | 0.001859 |
ORF7a | 58 | C58del | TGC | --- | 7 | 7 | AY.46.5 | 0.001389 |
ORF7a | 58 | C58del | TGC | --- | 7 | 7 | AY.71 | 0.003325 |
ORF7a | 58 | C58del | TGC | --- | 7 | 7 | AY.85 | 0.00299 |
ORF7a | 58 | C58del | TGC | --- | 7 | 7 | B.1.214.2 | 0.004197 |
ORF7a | 58 | C58del | TGC | --- | 6 | 6 | AY.108 | 0.006615 |
ORF7a | 58 | C58del | TGC | --- | 6 | 6 | AY.46.1 | 0.00616 |
ORF7a | 58 | C58del | TGC | --- | 6 | 6 | AY.65 | 0.003198 |
ORF7a | 58 | C58del | TGC | --- | 6 | 6 | AY.92 | 0.001724 |
ORF7a | 58 | C58del | TGC | --- | 6 | 6 | Q.1 | 0.000758 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | AY.16 | 0.001898 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | AY.4.4 | 0.002046 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | AY.48 | 0.002326 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | AY.52 | 0.004072 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | AY.66 | 0.005348 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | AY.80 | 0.005643 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | AY.95 | 0.003805 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | B.1.1.56 | 0.089286 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | B.1.375 | 0.004098 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | B.1.595 | 0.001305 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | B.1.70 | 0.121951 |
ORF7a | 58 | C58del | TGC | --- | 5 | 5 | P.2 | 0.000933 |
ORF7a | 58 | C58del | TGC | --- | 4 | 4 | A | 0.001548 |
ORF7a | 58 | C58del | TGC | --- | 4 | 4 | AY.34.1 | 0.00204 |
ORF7a | 58 | C58del | TGC | --- | 4 | 4 | AY.59 | 0.002119 |
ORF7a | 58 | C58del | TGC | --- | 4 | 4 | AY.73 | 0.002661 |
ORF7a | 58 | C58del | TGC | --- | 4 | 4 | B.1.234 | 0.000528 |
ORF7a | 58 | C58del | TGC | --- | 4 | 4 | D.2 | 0.0003 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.101 | 0.001471 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.24 | 0.001293 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.4.3 | 0.002525 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.40 | 0.002893 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.41 | 0.000882 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.5.3 | 0.001012 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.53 | 0.000863 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.69 | 0.00056 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.75.1 | 0.000541 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.79 | 0.003632 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.86 | 0.00249 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.88 | 0.002653 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | AY.93 | 0.000819 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.1.121 | 0.007282 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.1.25 | 0.001706 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.1.318 | 0.000905 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.160.16 | 0.002788 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.177.57 | 0.000843 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.177.6 | 0.00293 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.177.60 | 0.000655 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.177.81 | 0.000568 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.258 | 0.0002 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.351.2 | 0.000908 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.36 | 0.000438 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.575 | 0.00091 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.582 | 0.001472 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | B.1.626 | 0.017143 |
ORF7a | 58 | C58del | TGC | --- | 3 | 3 | P.1.16 | 0.001122 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | A.28 | 0.005291 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AD.2 | 0.000438 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.116.1 | 0.000623 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.120.2 | 0.002571 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.120.2.1 | 0.000997 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.2 | 0.000712 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.22 | 0.004184 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.39.2 | 0.003082 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.49 | 0.00639 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.51 | 0.001818 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.57 | 0.001312 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.64 | 0.00119 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.70 | 0.000417 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | AY.8 | 0.001212 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.1.1 | 0.000653 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.1.220 | 0.003717 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.1.37 | 0.000386 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.1.372 | 0.001377 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.1.521 | 0.010695 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.177.10 | 0.001756 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.177.16 | 0.001329 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.177.43 | 0.002954 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.177.55 | 0.004662 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.177.86 | 0.000367 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.258.11 | 0.000793 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.264 | 0.024691 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.311 | 0.000549 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.369 | 0.00057 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.416.1 | 0.003125 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.470 | 0.002809 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.617.3 | 0.00597 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | B.1.621.1 | 0.001012 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | C.36.3 | 0.001134 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | P.1.17.1 | 0.00175 |
ORF7a | 58 | C58del | TGC | --- | 2 | 2 | P.1.2 | 0.002312 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | A.1 | 0.000282 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | A.2.5.3 | 0.010309 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | A.23.1 | 0.000704 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AU.3 | 0.00211 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.104 | 0.001984 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.105 | 0.000643 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.11 | 0.001339 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.32 | 0.000532 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.72 | 0.001361 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.81 | 0.001992 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.89 | 0.004902 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AY.94 | 0.000443 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | AZ.2 | 0.000821 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B | 0.000128 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.157 | 0.000913 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.194 | 0.00495 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.205 | 0.003717 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.209 | 0.008929 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.240 | 0.004695 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.241 | 0.00207 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.277 | 0.000759 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.298 | 0.000862 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.303 | 0.002762 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.311 | 0.000358 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.366 | 0.015873 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.432 | 0.001266 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.437 | 0.010417 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.525 | 0.005464 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.115 | 0.021739 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.15 | 0.000631 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.53 | 0.002392 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.63 | 0.002703 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.8 | 0.000752 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.236 | 0.002053 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.240 | 0.000216 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.258.17 | 0.000104 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.265 | 0.001271 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.351.3 | 0.000876 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.36.35 | 0.002604 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.371 | 0.001122 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.389 | 0.001002 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.401 | 0.008197 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.406 | 0.006061 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.438.1 | 0.000107 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.459 | 0.004082 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.466.2 | 0.000391 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.497 | 0.000315 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.517 | 0.000427 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.534 | 0.0125 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.535 | 0.028571 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.564 | 0.000426 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.565 | 0.00081 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.568 | 0.001111 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.577 | 0.000687 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.609 | 0.000479 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.627 | 0.00202 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.1.9.1 | 0.032258 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.11 | 0.005128 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | B.39 | 0.002331 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | C.28 | 0.04 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | K.3 | 0.006173 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | P.1.1 | 0.000318 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | P.1.13 | 0.000898 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | P.1.3 | 0.034483 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 58 | C58del | TGC | --- | 1 | 1 | Q.7 | 0.001111 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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