CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = C58Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a58C58YnonsyntGctAc62520.8387127565-27567
ORF7a58C58YnonsyntGCtAT62100.1612927565-27567

Details of the mutation C58Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a58C58YtGctAc5262All0.00001
ORF7a58C58YtGCtAT1062All0.000002
ORF7a58C58YtGctAc1919B.1.1.70.000017
ORF7a58C58YtGctAc57AY.250.00003
ORF7a58C58YtGCtAT27AY.250.000012
ORF7a58C58YtGctAc47B.1.617.20.000015
ORF7a58C58YtGCtAT37B.1.617.20.000011
ORF7a58C58YtGctAc33AY.40.000005
ORF7a58C58YtGCtAT33B.1.177.210.000229
ORF7a58C58YtGctAc22AY.360.000296
ORF7a58C58YtGctAc22AY.440.000012
ORF7a58C58YtGCtAT12B.10.000009
ORF7a58C58YtGctAc12B.10.000009
ORF7a58C58YtGctAc22B.1.6090.000959
ORF7a58C58YtGctAc11AY.1030.000006
ORF7a58C58YtGctAc11AY.1190.000035
ORF7a58C58YtGctAc11AY.140.000088
ORF7a58C58YtGctAc11AY.39.1.10.000725
ORF7a58C58YtGctAc11AY.430.000004
ORF7a58C58YtGctAc11B.1.1770.000013
ORF7a58C58YtGctAc11B.1.20.000009
ORF7a58C58YtGctAc11B.1.2400.000216
ORF7a58C58YtGCtAT11B.1.3510.00003
ORF7a58C58YtGctAc11B.1.4270.00005
ORF7a58C58YtGctAc11B.1.4290.000024
ORF7a58C58YtGctAc11B.1.5050.004386
ORF7a58C58YtGctAc11B.1.5260.000024
ORF7a58C58YtGctAc11P.10.000016
ORF7a58C58YtGctAc11Q.10.000126