CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = C58R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a58C58RnonsynTgcCgc41380.92682927565-27567
ORF7a58C58RnonsynTgCAgG4110.024390227565-27567
ORF7a58C58RnonsynTgCCgT4110.024390227565-27567
ORF7a58C58RnonsynTgCCgA4110.024390227565-27567

Details of the mutation C58R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a58C58RTgcCgc3841All0.000007
ORF7a58C58RTgCAgG141All0
ORF7a58C58RTgCCgA141All0
ORF7a58C58RTgCCgT141All0
ORF7a58C58RTgcCgc910AY.250.000054
ORF7a58C58RTgCAgG110AY.250.000006
ORF7a58C58RTgcCgc77AY.40.000011
ORF7a58C58RTgcCgc66B.1.1.70.000005
ORF7a58C58RTgcCgc33AY.34.10.00153
ORF7a58C58RTgcCgc33AY.540.000286
ORF7a58C58RTgcCgc33B.10.000027
ORF7a58C58RTgcCgc22AY.430.000009
ORF7a58C58RTgCCgT11AY.260.000028
ORF7a58C58RTgcCgc11AY.30.00001
ORF7a58C58RTgCCgA11B.1.1770.000013
ORF7a58C58RTgcCgc11B.1.617.20.000004
ORF7a58C58RTgcCgc11B.40.002208
ORF7a58C58RTgcCgc11P.10.000016
ORF7a58C58RTgcCgc11P.1.160.000374