CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = A79T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a79A79TnonsynGccAcc1871860.99465227628-27630
ORF7a79A79TnonsynGcCAcG18710.0053475927628-27630

Details of the mutation A79T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a79A79TGccAcc186187All0.000036
ORF7a79A79TGcCAcG1187All0
ORF7a79A79TGccAcc5555AY.40.000086
ORF7a79A79TGccAcc2626AY.30.000259
ORF7a79A79TGccAcc1919B.1.1.70.000017
ORF7a79A79TGccAcc1818B.1.1770.000237
ORF7a79A79TGccAcc1515B.1.177.210.001147
ORF7a79A79TGccAcc77B.1.617.20.000026
ORF7a79A79TGccAcc55AY.250.00003
ORF7a79A79TGccAcc55B.1.2210.000355
ORF7a79A79TGccAcc44B.1.20.000035
ORF7a79A79TGccAcc33AY.430.000013
ORF7a79A79TGccAcc33AY.440.000018
ORF7a79A79TGccAcc22AY.1000.000092
ORF7a79A79TGccAcc22AY.1030.000012
ORF7a79A79TGccAcc22AY.390.000049
ORF7a79A79TGccAcc22AY.420.00008
ORF7a79A79TGccAcc22AY.470.000062
ORF7a79A79TGccAcc22B.1.1.1800.021505
ORF7a79A79TGccAcc22B.1.1600.000062
ORF7a79A79TGccAcc11AY.200.000039
ORF7a79A79TGccAcc11AY.350.000233
ORF7a79A79TGcCAcG11AY.540.000095
ORF7a79A79TGccAcc11AY.750.000056
ORF7a79A79TGccAcc11B.10.000009
ORF7a79A79TGccAcc11B.1.1.2140.000055
ORF7a79A79TGccAcc11B.1.177.570.000281
ORF7a79A79TGccAcc11B.1.2340.000132
ORF7a79A79TGccAcc11B.1.416.10.001563
ORF7a79A79TGccAcc11B.1.4290.000024
ORF7a79A79TGccAcc11C.370.000116
ORF7a79A79TGccAcc11P.10.000016
ORF7a79A79TGccAcc11P.1.170.000162