CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = A55I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a55A55InonsynGCaATa28110.39285727556-27558
ORF7a55A55InonsynGCAATT28110.39285727556-27558
ORF7a55A55InonsynGCAATC2860.21428627556-27558

Details of the mutation A55I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a55A55IGCAATT1128All0.000002
ORF7a55A55IGCaATa1128All0.000002
ORF7a55A55IGCAATC628All0.000001
ORF7a55A55IGCAATT614AY.250.000036
ORF7a55A55IGCaATa414AY.250.000024
ORF7a55A55IGCAATC414AY.250.000024
ORF7a55A55IGCAATT24B.1.617.20.000008
ORF7a55A55IGCaATa24B.1.617.20.000008
ORF7a55A55IGCaATa13B.1.177.210.000076
ORF7a55A55IGCAATT13B.1.177.210.000076
ORF7a55A55IGCAATC13B.1.177.210.000076
ORF7a55A55IGCAATC12B.1.3510.00003
ORF7a55A55IGCaATa12B.1.3510.00003
ORF7a55A55IGCaATa11AY.1190.000035
ORF7a55A55IGCaATa11AY.3.10.000085
ORF7a55A55IGCAATT11B.10.000009
ORF7a55A55IGCaATa11B.1.1.70.000001
ORF7a55A55IGCAATT11B.1.5250.000113