CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = A55A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a55A55AsyngcAgcG205790.38536627556-27558
ORF7a55A55AsyngcAgcT205730.35609827556-27558
ORF7a55A55AsyngcAgcC205530.25853727556-27558

Details of the mutation A55A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a55A55AgcAgcG79205All0.000015
ORF7a55A55AgcAgcT73205All0.000014
ORF7a55A55AgcAgcC53205All0.00001
ORF7a55A55AgcAgcC2535AY.40.000039
ORF7a55A55AgcAgcG735AY.40.000011
ORF7a55A55AgcAgcT335AY.40.000005
ORF7a55A55AgcAgcG1635B.1.1.70.000014
ORF7a55A55AgcAgcT1135B.1.1.70.00001
ORF7a55A55AgcAgcC835B.1.1.70.000007
ORF7a55A55AgcAgcT2324AY.120.10.007384
ORF7a55A55AgcAgcC124AY.120.10.000321
ORF7a55A55AgcAgcT612B.1.617.20.000023
ORF7a55A55AgcAgcG512B.1.617.20.000019
ORF7a55A55AgcAgcC112B.1.617.20.000004
ORF7a55A55AgcAgcG1212D.20.0009
ORF7a55A55AgcAgcT59AY.250.00003
ORF7a55A55AgcAgcC29AY.250.000012
ORF7a55A55AgcAgcG29AY.250.000012
ORF7a55A55AgcAgcC67B.1.5250.000679
ORF7a55A55AgcAgcT17B.1.5250.000113
ORF7a55A55AgcAgcT44AY.1130.00057
ORF7a55A55AgcAgcG24AY.430.000009
ORF7a55A55AgcAgcT24AY.430.000009
ORF7a55A55AgcAgcC34B.1.20.000026
ORF7a55A55AgcAgcG14B.1.20.000009
ORF7a55A55AgcAgcC24P.10.000032
ORF7a55A55AgcAgcG14P.10.000016
ORF7a55A55AgcAgcT14P.10.000016
ORF7a55A55AgcAgcG23AY.390.000049
ORF7a55A55AgcAgcT13AY.390.000025
ORF7a55A55AgcAgcG23AY.440.000012
ORF7a55A55AgcAgcT13AY.440.000006
ORF7a55A55AgcAgcG33AY.9.2.10.005929
ORF7a55A55AgcAgcG23B.10.000018
ORF7a55A55AgcAgcT13B.10.000009
ORF7a55A55AgcAgcG33B.1.1770.00004
ORF7a55A55AgcAgcG13B.1.3510.00003
ORF7a55A55AgcAgcC13B.1.3510.00003
ORF7a55A55AgcAgcT13B.1.3510.00003
ORF7a55A55AgcAgcG33P.1.140.000143
ORF7a55A55AgcAgcT220.111111
ORF7a55A55AgcAgcG22AY.1180.000125
ORF7a55A55AgcAgcG22AY.260.000057
ORF7a55A55AgcAgcG22AY.290.000032
ORF7a55A55AgcAgcT22AY.330.000134
ORF7a55A55AgcAgcG22B.1.10.000036
ORF7a55A55AgcAgcT22B.1.1.3230.028169
ORF7a55A55AgcAgcT11AY.10.000396
ORF7a55A55AgcAgcT11AY.1170.000085
ORF7a55A55AgcAgcG11AY.1190.000035
ORF7a55A55AgcAgcT11AY.130.000161
ORF7a55A55AgcAgcC11AY.4.50.000107
ORF7a55A55AgcAgcT11AY.470.000031
ORF7a55A55AgcAgcG11AY.50.000021
ORF7a55A55AgcAgcT11AY.5.30.000337
ORF7a55A55AgcAgcG11AY.690.000187
ORF7a55A55AgcAgcT11AY.750.000056
ORF7a55A55AgcAgcG11B.1.1.1580.012195
ORF7a55A55AgcAgcC11B.1.1.4860.001577
ORF7a55A55AgcAgcT11B.1.1.5190.00004
ORF7a55A55AgcAgcG11B.1.177.50.001242
ORF7a55A55AgcAgcG11B.1.2600.003344
ORF7a55A55AgcAgcC11B.1.3110.000275
ORF7a55A55AgcAgcG11B.1.360.000146
ORF7a55A55AgcAgcG11B.1.4270.00005
ORF7a55A55AgcAgcG11B.1.4290.000024
ORF7a55A55AgcAgcC11B.1.4970.000315