CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = A105A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a105A105AsyngcGgcA241218170.75331727706-27708
ORF7a105A105AsyngcGgcT24125650.23424527706-27708
ORF7a105A105AsyngcGgcC2412300.012437827706-27708

Details of the mutation A105A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a105A105AgcGgcA18172412All0.000348
ORF7a105A105AgcGgcT5652412All0.000108
ORF7a105A105AgcGgcC302412All0.000006
ORF7a105A105AgcGgcA781866AY.430.00346
ORF7a105A105AgcGgcT85866AY.430.000377
ORF7a105A105AgcGgcA453497AY.40.000705
ORF7a105A105AgcGgcT44497AY.40.000068
ORF7a105A105AgcGgcA84149B.1.1.70.000075
ORF7a105A105AgcGgcT64149B.1.1.70.000057
ORF7a105A105AgcGgcC1149B.1.1.70.000001
ORF7a105A105AgcGgcT5179B.1.617.20.000192
ORF7a105A105AgcGgcA2879B.1.617.20.000105
ORF7a105A105AgcGgcA5564B.1.20.000484
ORF7a105A105AgcGgcT964B.1.20.000079
ORF7a105A105AgcGgcA3344B.10.000302
ORF7a105A105AgcGgcT1144B.10.000101
ORF7a105A105AgcGgcT4343B.1.1.3430.895833
ORF7a105A105AgcGgcA4141AS.10.390476
ORF7a105A105AgcGgcA3636P.20.006719
ORF7a105A105AgcGgcA3232B.1.4380.20915
ORF7a105A105AgcGgcT3131B.1.1.500.021045
ORF7a105A105AgcGgcA1929AY.440.000116
ORF7a105A105AgcGgcT1029AY.440.000061
ORF7a105A105AgcGgcA1724AY.30.000169
ORF7a105A105AgcGgcT724AY.30.00007
ORF7a105A105AgcGgcC2123AY.1180.001316
ORF7a105A105AgcGgcA123AY.1180.000063
ORF7a105A105AgcGgcT123AY.1180.000063
ORF7a105A105AgcGgcT1221B.1.10.000218
ORF7a105A105AgcGgcA921B.1.10.000163
ORF7a105A105AgcGgcA1521P.10.000236
ORF7a105A105AgcGgcT621P.10.000095
ORF7a105A105AgcGgcA1420AY.1030.000087
ORF7a105A105AgcGgcT620AY.1030.000037
ORF7a105A105AgcGgcT1017AY.250.00006
ORF7a105A105AgcGgcA717AY.250.000042
ORF7a105A105AgcGgcT1516B.1.4270.000757
ORF7a105A105AgcGgcA116B.1.4270.00005
ORF7a105A105AgcGgcT815AY.260.000226
ORF7a105A105AgcGgcA715AY.260.000198
ORF7a105A105AgcGgcA1515AY.5.40.004151
ORF7a105A105AgcGgcT1414AY.70.002744
ORF7a105A105AgcGgcA1212B.1.1.3170.00494
ORF7a105A105AgcGgcA910B.1.5960.000784
ORF7a105A105AgcGgcT110B.1.5960.000087
ORF7a105A105AgcGgcA59AY.1020.000133
ORF7a105A105AgcGgcT49AY.1020.000106
ORF7a105A105AgcGgcT58B.1.3510.000149
ORF7a105A105AgcGgcA38B.1.3510.000089
ORF7a105A105AgcGgcT47AY.390.000099
ORF7a105A105AgcGgcA37AY.390.000074
ORF7a105A105AgcGgcT77AY.39.10.000277
ORF7a105A105AgcGgcA77AY.46.10.007187
ORF7a105A105AgcGgcA57AY.60.000206
ORF7a105A105AgcGgcT27AY.60.000082
ORF7a105A105AgcGgcA57C.370.00058
ORF7a105A105AgcGgcT27C.370.000232
ORF7a105A105AgcGgcA560.277778
ORF7a105A105AgcGgcT160.055556
ORF7a105A105AgcGgcT66AY.1110.001099
ORF7a105A105AgcGgcA46AY.1200.000149
ORF7a105A105AgcGgcT26AY.1200.000074
ORF7a105A105AgcGgcA66AY.750.000336
ORF7a105A105AgcGgcT45AY.1140.000924
ORF7a105A105AgcGgcA15AY.1140.000231
ORF7a105A105AgcGgcT35AY.4.20.000065
ORF7a105A105AgcGgcA25AY.4.20.000043
ORF7a105A105AgcGgcT55AY.4.30.004209
ORF7a105A105AgcGgcT35AY.50.000062
ORF7a105A105AgcGgcA25AY.50.000041
ORF7a105A105AgcGgcA45AY.9.20.000147
ORF7a105A105AgcGgcT15AY.9.20.000037
ORF7a105A105AgcGgcT35B.1.1770.00004
ORF7a105A105AgcGgcC15B.1.1770.000013
ORF7a105A105AgcGgcA15B.1.1770.000013
ORF7a105A105AgcGgcT35B.1.2210.000213
ORF7a105A105AgcGgcA25B.1.2210.000142
ORF7a105A105AgcGgcA55P.1.50.384615
ORF7a105A105AgcGgcT44AY.1100.000451
ORF7a105A105AgcGgcA24AY.290.000032
ORF7a105A105AgcGgcT24AY.290.000032
ORF7a105A105AgcGgcT34AY.4.50.000322
ORF7a105A105AgcGgcC14AY.4.50.000107
ORF7a105A105AgcGgcA34AY.460.000312
ORF7a105A105AgcGgcT14AY.460.000104
ORF7a105A105AgcGgcT44B.1.1.2280.012195
ORF7a105A105AgcGgcA44B.1.1.5190.000159
ORF7a105A105AgcGgcA34B.1.2400.000647
ORF7a105A105AgcGgcT14B.1.2400.000216
ORF7a105A105AgcGgcT24B.1.2430.000139
ORF7a105A105AgcGgcA24B.1.2430.000139
ORF7a105A105AgcGgcA44B.1.4000.001716
ORF7a105A105AgcGgcA44P.1.100.001078
ORF7a105A105AgcGgcT34P.1.140.000143
ORF7a105A105AgcGgcA14P.1.140.000048
ORF7a105A105AgcGgcT33AY.10.001187
ORF7a105A105AgcGgcA23AY.1130.000285
ORF7a105A105AgcGgcT13AY.1130.000142
ORF7a105A105AgcGgcT23AY.200.000078
ORF7a105A105AgcGgcA13AY.200.000039
ORF7a105A105AgcGgcC33AY.360.000445
ORF7a105A105AgcGgcT33AY.420.000121
ORF7a105A105AgcGgcA23AY.46.40.000329
ORF7a105A105AgcGgcT13AY.46.40.000165
ORF7a105A105AgcGgcA33AY.550.002752
ORF7a105A105AgcGgcA23AY.7.10.000225
ORF7a105A105AgcGgcT13AY.7.10.000113
ORF7a105A105AgcGgcT33AY.740.000347
ORF7a105A105AgcGgcA23AY.90.000135
ORF7a105A105AgcGgcT13AY.90.000068
ORF7a105A105AgcGgcA33B.1.1.2510.02381
ORF7a105A105AgcGgcT33B.1.1.3030.008287
ORF7a105A105AgcGgcT33B.1.2180.015464
ORF7a105A105AgcGgcT33B.1.3490.002144
ORF7a105A105AgcGgcA23B.1.4290.000047
ORF7a105A105AgcGgcT13B.1.4290.000024
ORF7a105A105AgcGgcT22AY.1170.000169
ORF7a105A105AgcGgcT12AY.23.10.000417
ORF7a105A105AgcGgcA12AY.23.10.000417
ORF7a105A105AgcGgcA22AY.330.000134
ORF7a105A105AgcGgcA12AY.340.000097
ORF7a105A105AgcGgcT12AY.340.000097
ORF7a105A105AgcGgcA22AY.380.000999
ORF7a105A105AgcGgcA22AY.470.000062
ORF7a105A105AgcGgcT22AY.5.30.000675
ORF7a105A105AgcGgcC22AY.75.10.000361
ORF7a105A105AgcGgcA22AY.9.10.000167
ORF7a105A105AgcGgcA22AY.98.10.000097
ORF7a105A105AgcGgcT12B.1.1.2160.00089
ORF7a105A105AgcGgcC12B.1.1.2160.00089
ORF7a105A105AgcGgcT22B.1.1.3360.033333
ORF7a105A105AgcGgcA22B.1.1.830.00542
ORF7a105A105AgcGgcT22B.1.110.30.001437
ORF7a105A105AgcGgcT12B.1.2340.000132
ORF7a105A105AgcGgcA12B.1.2340.000132
ORF7a105A105AgcGgcA22B.1.258.210.015504
ORF7a105A105AgcGgcT12B.1.3960.000706
ORF7a105A105AgcGgcA12B.1.3960.000706
ORF7a105A105AgcGgcT22B.1.6290.026667
ORF7a105A105AgcGgcA11AY.1000.000046
ORF7a105A105AgcGgcT11AY.1010.00049
ORF7a105A105AgcGgcA11AY.120.000316
ORF7a105A105AgcGgcT11AY.120.2.10.000498
ORF7a105A105AgcGgcA11AY.140.000088
ORF7a105A105AgcGgcA11AY.270.000065
ORF7a105A105AgcGgcA11AY.34.10.00051
ORF7a105A105AgcGgcT11AY.4.2.10.000149
ORF7a105A105AgcGgcT11AY.46.60.000072
ORF7a105A105AgcGgcA11AY.510.000909
ORF7a105A105AgcGgcA11AY.700.000209
ORF7a105A105AgcGgcT11AY.920.000287
ORF7a105A105AgcGgcT11AY.970.001701
ORF7a105A105AgcGgcT11AY.99.20.000092
ORF7a105A105AgcGgcT11B0.000128
ORF7a105A105AgcGgcA11B.1.1.1760.000439
ORF7a105A105AgcGgcT11B.1.1.2220.000204
ORF7a105A105AgcGgcA11B.1.1.2940.001266
ORF7a105A105AgcGgcT11B.1.1.3050.003861
ORF7a105A105AgcGgcA11B.1.1.3760.005952
ORF7a105A105AgcGgcT11B.1.1.3970.002252
ORF7a105A105AgcGgcA11B.1.1.4090.002833
ORF7a105A105AgcGgcT11B.1.1.4340.000349
ORF7a105A105AgcGgcA11B.1.1.4870.005587
ORF7a105A105AgcGgcT11B.1.1100.004525
ORF7a105A105AgcGgcA11B.1.1600.000031
ORF7a105A105AgcGgcA11B.1.177.210.000076
ORF7a105A105AgcGgcA11B.1.177.440.000519
ORF7a105A105AgcGgcA11B.1.177.750.001041
ORF7a105A105AgcGgcA11B.1.177.860.000183
ORF7a105A105AgcGgcA11B.1.2270.047619
ORF7a105A105AgcGgcA11B.1.2370.004975
ORF7a105A105AgcGgcA11B.1.2910.019231
ORF7a105A105AgcGgcA11B.1.3460.001311
ORF7a105A105AgcGgcT11B.1.351.20.000303
ORF7a105A105AgcGgcT11B.1.360.000146
ORF7a105A105AgcGgcT11B.1.36.390.002217
ORF7a105A105AgcGgcA11B.1.466.20.000391
ORF7a105A105AgcGgcA11B.1.5250.000113
ORF7a105A105AgcGgcT11B.1.5260.000024
ORF7a105A105AgcGgcA11B.1.5610.000397
ORF7a105A105AgcGgcT11B.1.5950.000261
ORF7a105A105AgcGgcA11B.1.5990.00365
ORF7a105A105AgcGgcA11B.1.6000.005848
ORF7a105A105AgcGgcA11B.1.780.008547
ORF7a105A105AgcGgcT11B.40.002208
ORF7a105A105AgcGgcA11C.36.30.000567
ORF7a105A105AgcGgcT11P.1.150.000232
ORF7a105A105AgcGgcA11Q.10.000126
ORF7a105A105AgcGgcT11Q.30.000145
ORF7a105A105AgcGgcT11Q.40.000455
ORF7a105A105AgcGgcA11R.10.00009