CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 88 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a88I88deldelATC---19801980127655-27657

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a88I88delATC---19801980All0.000379
ORF7a88I88delATC---515515B.1.1.70.000461
ORF7a88I88delATC---246246AY.40.000383
ORF7a88I88delATC---176176B.1.177.210.013459
ORF7a88I88delATC---9191AY.30.000905
ORF7a88I88delATC---8181AY.290.001278
ORF7a88I88delATC---7373AY.250.000439
ORF7a88I88delATC---5050AY.1030.00031
ORF7a88I88delATC---5050AY.430.000222
ORF7a88I88delATC---4242B.1.617.20.000158
ORF7a88I88delATC---3737AY.390.000914
ORF7a88I88delATC---3737B.1.1.2840.003974
ORF7a88I88delATC---3434B.1.6210.00301
ORF7a88I88delATC---3131AY.440.000189
ORF7a88I88delATC---2929B.1.20.000255
ORF7a88I88delATC---2727B.10.000247
ORF7a88I88delATC---2323AY.3.10.001961
ORF7a88I88delATC---2323B.1.1.2140.001276
ORF7a88I88delATC---2020AY.7.20.011186
ORF7a88I88delATC---1818B.1.5260.000423
ORF7a88I88delATC---1717P.10.000268
ORF7a88I88delATC---1515AY.260.000425
ORF7a88I88delATC---1414B.1.1770.000184
ORF7a88I88delATC---1212B.1.3240.019262
ORF7a88I88delATC---1111AY.1000.000506
ORF7a88I88delATC---1111AY.1210.001488
ORF7a88I88delATC---1111B.1.6370.000804
ORF7a88I88delATC---1010B.1.1.5190.000397
ORF7a88I88delATC---99AY.1100.001014
ORF7a88I88delATC---99AY.1200.000335
ORF7a88I88delATC---99B.1.10.000163
ORF7a88I88delATC---99B.1.3510.000268
ORF7a88I88delATC---99R.10.00081
ORF7a88I88delATC---88B.1.1.2310.024768
ORF7a88I88delATC---77B.1.5960.00061
ORF7a88I88delATC---77C.370.000812
ORF7a88I88delATC---66B.1.1600.000187
ORF7a88I88delATC---66P.1.150.001394
ORF7a88I88delATC---55AY.230.000349
ORF7a88I88delATC---55AY.420.000201
ORF7a88I88delATC---55B.1.5250.000566
ORF7a88I88delATC---44AY.1180.000251
ORF7a88I88delATC---44AY.1190.000141
ORF7a88I88delATC---44AY.200.000155
ORF7a88I88delATC---44AY.790.004843
ORF7a88I88delATC---44AY.98.10.000194
ORF7a88I88delATC---44Q.80.00066
ORF7a88I88delATC---33AY.4.20.000065
ORF7a88I88delATC---33AY.4.50.000322
ORF7a88I88delATC---33AY.46.40.000494
ORF7a88I88delATC---33AY.470.000093
ORF7a88I88delATC---33B.1.1.1210.007282
ORF7a88I88delATC---33B.1.1.250.001706
ORF7a88I88delATC---33B.1.2340.000396
ORF7a88I88delATC---33B.1.5750.00091
ORF7a88I88delATC---33B.1.6260.017143
ORF7a88I88delATC---33Q.10.000379
ORF7a88I88delATC---220.111111
ORF7a88I88delATC---22A0.000774
ORF7a88I88delATC---22A.280.005291
ORF7a88I88delATC---22AY.1060.00067
ORF7a88I88delATC---22AY.1080.002205
ORF7a88I88delATC---22AY.1140.000462
ORF7a88I88delATC---22AY.120.000632
ORF7a88I88delATC---22AY.160.000759
ORF7a88I88delATC---22AY.240.000862
ORF7a88I88delATC---22AY.29.10.000441
ORF7a88I88delATC---22AY.330.000134
ORF7a88I88delATC---22AY.340.000194
ORF7a88I88delATC---22AY.360.000296
ORF7a88I88delATC---22AY.450.000243
ORF7a88I88delATC---22AY.50.000041
ORF7a88I88delATC---22AY.9.10.000167
ORF7a88I88delATC---22AY.9.20.000073
ORF7a88I88delATC---22AY.990.002099
ORF7a88I88delATC---22B0.000256
ORF7a88I88delATC---22B.1.177.150.001262
ORF7a88I88delATC---22B.1.177.860.000367
ORF7a88I88delATC---22B.1.214.20.001199
ORF7a88I88delATC---22B.1.258.110.000793
ORF7a88I88delATC---22B.1.360.000292
ORF7a88I88delATC---22B.1.4270.000101
ORF7a88I88delATC---22B.1.4290.000047
ORF7a88I88delATC---11A.10.000282
ORF7a88I88delATC---11A.2.20.001689
ORF7a88I88delATC---11AY.1010.00049
ORF7a88I88delATC---11AY.1130.000142
ORF7a88I88delATC---11AY.1160.000287
ORF7a88I88delATC---11AY.116.10.000311
ORF7a88I88delATC---11AY.1170.000085
ORF7a88I88delATC---11AY.130.000161
ORF7a88I88delATC---11AY.140.000088
ORF7a88I88delATC---11AY.190.00114
ORF7a88I88delATC---11AY.270.000065
ORF7a88I88delATC---11AY.300.000396
ORF7a88I88delATC---11AY.5.30.000337
ORF7a88I88delATC---11AY.530.000288
ORF7a88I88delATC---11AY.540.000095
ORF7a88I88delATC---11AY.610.000105
ORF7a88I88delATC---11AY.680.000274
ORF7a88I88delATC---11AY.690.000187
ORF7a88I88delATC---11AY.7.10.000113
ORF7a88I88delATC---11AY.710.000475
ORF7a88I88delATC---11AY.750.000056
ORF7a88I88delATC---11AY.75.10.00018
ORF7a88I88delATC---11AY.850.000427
ORF7a88I88delATC---11AY.90.000068
ORF7a88I88delATC---11AY.910.00073
ORF7a88I88delATC---11AY.980.000079
ORF7a88I88delATC---11AY.99.20.000092
ORF7a88I88delATC---11AZ.20.000821
ORF7a88I88delATC---11B.1.1.1700.001247
ORF7a88I88delATC---11B.1.1.1740.003378
ORF7a88I88delATC---11B.1.1.1920.002309
ORF7a88I88delATC---11B.1.1.2220.000204
ORF7a88I88delATC---11B.1.1.2580.003257
ORF7a88I88delATC---11B.1.1.2650.003155
ORF7a88I88delATC---11B.1.1.3180.000302
ORF7a88I88delATC---11B.1.1.330.000421
ORF7a88I88delATC---11B.1.1.3660.015873
ORF7a88I88delATC---11B.1.1.4480.002033
ORF7a88I88delATC---11B.1.1.700.000341
ORF7a88I88delATC---11B.1.1150.021739
ORF7a88I88delATC---11B.1.177.100.000878
ORF7a88I88delATC---11B.1.177.500.004695
ORF7a88I88delATC---11B.1.177.570.000281
ORF7a88I88delATC---11B.1.177.620.001192
ORF7a88I88delATC---11B.1.177.810.000189
ORF7a88I88delATC---11B.1.2210.000071
ORF7a88I88delATC---11B.1.2400.000216
ORF7a88I88delATC---11B.1.2430.00007
ORF7a88I88delATC---11B.1.2580.000067
ORF7a88I88delATC---11B.1.258.170.000104
ORF7a88I88delATC---11B.1.2650.001271
ORF7a88I88delATC---11B.1.3190.003049
ORF7a88I88delATC---11B.1.351.20.000303
ORF7a88I88delATC---11B.1.3710.001122
ORF7a88I88delATC---11B.1.3750.00082
ORF7a88I88delATC---11B.1.4590.004082
ORF7a88I88delATC---11B.1.4680.005714
ORF7a88I88delATC---11B.1.4700.001404
ORF7a88I88delATC---11B.1.5270.003704
ORF7a88I88delATC---11B.1.5770.000687
ORF7a88I88delATC---11B.1.5820.000491
ORF7a88I88delATC---11B.1.5950.000261
ORF7a88I88delATC---11B.1.617.10.000129
ORF7a88I88delATC---11B.1.621.10.000506
ORF7a88I88delATC---11B.1.6380.052632
ORF7a88I88delATC---11B.1.9.10.032258
ORF7a88I88delATC---11B.1.930.000934
ORF7a88I88delATC---11C.36.30.000567
ORF7a88I88delATC---11P.1.10.000318
ORF7a88I88delATC---11P.1.120.000484
ORF7a88I88delATC---11P.1.130.000898
ORF7a88I88delATC---11P.1.140.000048
ORF7a88I88delATC---11P.1.160.000374
ORF7a88I88delATC---11P.1.30.034483
ORF7a88I88delATC---11P.1.40.000977
ORF7a88I88delATC---11Q.70.001111