CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 88

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a88I88IsynatCatT390438730.99205927655-27657
ORF7a88I88IsynatCatA3904310.0079405727655-27657
ORF7a88I88TnonsynaTcaCc288228730.99687727655-27657
ORF7a88I88TnonsynaTCaCT288290.0031228327655-27657
ORF7a88I88deldelATC---19801980127655-27657
ORF7a88I88VnonsynAtcGtc116511640.99914227655-27657
ORF7a88I88VnonsynAtCGtA116510.00085836927655-27657
ORF7a88I88FnonsynAtcTtc1211200.99173627655-27657
ORF7a88I88FnonsynAtCTtT12110.0082644627655-27657
ORF7a88I88SnonsynaTcaGc89870.97752827655-27657
ORF7a88I88SnonsynATCTCT8910.01123627655-27657
ORF7a88I88SnonsynATcTCc8910.01123627655-27657
ORF7a88I88LnonsynAtcCtc6363127655-27657
ORF7a88I88NnonsynaTcaAc2424127655-27657
ORF7a88I88EnonsynATCGAA1515127655-27657
ORF7a88I88MnonsynatCatG1515127655-27657
ORF7a88I88del1delatCat-1560.427655-27657
ORF7a88I88del1delAtc-tc1540.26666727655-27657
ORF7a88I88del1delATC-NN1520.13333327655-27657
ORF7a88I88del1delAtC-tN1510.066666727655-27657
ORF7a88I88del1delaTCa-N1510.066666727655-27657
ORF7a88I88del1delaTca-c1510.066666727655-27657
ORF7a88I88del2delATc--c1090.927655-27657
ORF7a88I88del2delATCG--1010.127655-27657
ORF7a88I88YnonsynATcTAc55127655-27657
ORF7a88I88KnonsynaTCaAA44127655-27657
ORF7a88I88RnonsynaTCaGA11127655-27657
ORF7a88I88AnonsynATcGCc11127655-27657

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a88I88IatCatT38733904All0.000741
ORF7a88I88IatCatA313904All0.000006
ORF7a88I88TaTcaCc28732882All0.000549
ORF7a88I88TaTCaCT92882All0.000002
ORF7a88I88TaTcaCc25292529AY.40.003936
ORF7a88I88delATC---19801980All0.000379
ORF7a88I88IatCatT14401440AY.730.958084
ORF7a88I88VAtcGtc11641165All0.000223
ORF7a88I88VAtCGtA11165All0
ORF7a88I88VAtcGtc688688B.1.10.012481
ORF7a88I88IatCatT634634AY.40.000987
ORF7a88I88delATC---515515B.1.1.70.000461
ORF7a88I88delATC---246246AY.40.000383
ORF7a88I88IatCatT224224AY.430.000992
ORF7a88I88delATC---176176B.1.177.210.013459
ORF7a88I88IatCatT162167B.1.1.70.000145
ORF7a88I88IatCatA5167B.1.1.70.000004
ORF7a88I88IatCatT129133B.1.617.20.000486
ORF7a88I88IatCatA4133B.1.617.20.000015
ORF7a88I88IatCatT127128AY.290.002003
ORF7a88I88IatCatA1128AY.290.000016
ORF7a88I88FAtcTtc120121All0.000023
ORF7a88I88FAtCTtT1121All0
ORF7a88I88IatCatT106106AY.9.10.008875
ORF7a88I88IatCatT9595AY.1020.002519
ORF7a88I88delATC---9191AY.30.000905
ORF7a88I88SaTcaGc8789All0.000017
ORF7a88I88SATcTCc189All0
ORF7a88I88SATCTCT189All0
ORF7a88I88VAtcGtc8282AY.40.000128
ORF7a88I88delATC---8181AY.290.001278
ORF7a88I88IatCatT7575AY.250.000451
ORF7a88I88IatCatT7474AY.440.00045
ORF7a88I88delATC---7373AY.250.000439
ORF7a88I88SaTcaGc6364B.1.1.70.000056
ORF7a88I88SATCTCT164B.1.1.70.000001
ORF7a88I88LAtcCtc6363All0.000012
ORF7a88I88IatCatT6363AY.900.043121
ORF7a88I88IatCatT5858AY.230.004045
ORF7a88I88LAtcCtc5858B.1.1.70.000052
ORF7a88I88IatCatT5454AY.470.00168
ORF7a88I88delATC---5050AY.1030.00031
ORF7a88I88delATC---5050AY.430.000222
ORF7a88I88VAtcGtc4444AY.690.008214
ORF7a88I88VAtcGtc4343AY.1030.000267
ORF7a88I88VAtcGtc4343B.1.617.20.000162
ORF7a88I88IatCatT4242AY.200.001632
ORF7a88I88TaTcaCc4242B.1.1.70.000038
ORF7a88I88delATC---4242B.1.617.20.000158
ORF7a88I88IatCatT3840AY.1030.000236
ORF7a88I88IatCatA240AY.1030.000012
ORF7a88I88IatCatT4040AY.260.001132
ORF7a88I88delATC---3737AY.390.000914
ORF7a88I88delATC---3737B.1.1.2840.003974
ORF7a88I88TaTcaCc3636B.10.00033
ORF7a88I88TaTcaCc3535B.1.617.20.000132
ORF7a88I88delATC---3434B.1.6210.00301
ORF7a88I88delATC---3131AY.440.000189
ORF7a88I88VAtcGtc3030AY.90.002028
ORF7a88I88delATC---2929B.1.20.000255
ORF7a88I88IatCatT2828P.10.000441
ORF7a88I88delATC---2727B.10.000247
ORF7a88I88NaTcaAc2424All0.000005
ORF7a88I88IatCatT2424AY.1130.003417
ORF7a88I88FAtcTtc2424B.1.617.20.00009
ORF7a88I88IatCatT2323AY.270.001489
ORF7a88I88delATC---2323AY.3.10.001961
ORF7a88I88VAtcGtc2223AY.440.000134
ORF7a88I88VAtCGtA123AY.440.000006
ORF7a88I88delATC---2323B.1.1.2140.001276
ORF7a88I88VAtcGtc2323B.1.1.70.000021
ORF7a88I88TaTcaCc2020AY.50.000413
ORF7a88I88delATC---2020AY.7.20.011186
ORF7a88I88IatCatT1818AY.50.000372
ORF7a88I88TaTcaCc1818B.1.10.000327
ORF7a88I88delATC---1818B.1.5260.000423
ORF7a88I88TaTcaCc1717AY.1030.000106
ORF7a88I88TaTcaCc1717AY.430.000075
ORF7a88I88delATC---1717P.10.000268
ORF7a88I88VAtcGtc1616B.1.1.3190.280702
ORF7a88I88MatCatG1515All0.000003
ORF7a88I88EATCGAA1515All0.000003
ORF7a88I88del1atCat-615All0.000001
ORF7a88I88del1Atc-tc415All0.000001
ORF7a88I88del1ATC-NN215All0
ORF7a88I88del1AtC-tN115All0
ORF7a88I88del1aTCa-N115All0
ORF7a88I88del1aTca-c115All0
ORF7a88I88delATC---1515AY.260.000425
ORF7a88I88IatCatT1515AY.460.001561
ORF7a88I88TaTcaCc1515B.1.2430.001044
ORF7a88I88IatCatT1414AY.4.20.000304
ORF7a88I88FAtcTtc1414AY.430.000062
ORF7a88I88delATC---1414B.1.1770.000184
ORF7a88I88EATCGAA1313B.1.177.210.000994
ORF7a88I88TaTcaCc1313P.10.000205
ORF7a88I88IatCatT912AY.390.000222
ORF7a88I88IatCatA312AY.390.000074
ORF7a88I88FAtcTtc1212AY.40.000019
ORF7a88I88IatCatT1212AY.4.30.010101
ORF7a88I88IatCatT1212AY.610.001257
ORF7a88I88TaTcaCc1212AY.75.10.002164
ORF7a88I88TaTcaCc1212AY.99.20.001106
ORF7a88I88IatCatT1212B.1.20.000106
ORF7a88I88delATC---1212B.1.3240.019262
ORF7a88I88IatCatT1212B.1.4290.000282
ORF7a88I88delATC---1111AY.1000.000506
ORF7a88I88delATC---1111AY.1210.001488
ORF7a88I88IatCatT1111AY.30.000109
ORF7a88I88IatCatT1111B.1.10.0002
ORF7a88I88VAtcGtc1111B.1.1.10.003594
ORF7a88I88VAtcGtc1111B.1.177.240.014249
ORF7a88I88delATC---1111B.1.6370.000804
ORF7a88I88del2ATc--c910All0.000002
ORF7a88I88del2ATCG--110All0
ORF7a88I88IatCatT1010AY.540.000953
ORF7a88I88delATC---1010B.1.1.5190.000397
ORF7a88I88IatCatT1010B.1.5950.00261
ORF7a88I88TaTcaCc1010P.1.140.000478
ORF7a88I88delATC---99AY.1100.001014
ORF7a88I88delATC---99AY.1200.000335
ORF7a88I88IatCatT89B.10.000073
ORF7a88I88IatCatA19B.10.000009
ORF7a88I88delATC---99B.1.10.000163
ORF7a88I88VAtcGtc99B.1.1.2690.012179
ORF7a88I88IatCatT99B.1.1.500.00611
ORF7a88I88delATC---99B.1.3510.000268
ORF7a88I88FAtcTtc99B.1.3690.002567
ORF7a88I88delATC---99R.10.00081
ORF7a88I88IatCatT88AY.420.000322
ORF7a88I88IatCatA78AY.690.001307
ORF7a88I88IatCatT18AY.690.000187
ORF7a88I88IatCatT88AY.9.20.000294
ORF7a88I88VAtcGtc88B.1.1.1610.028269
ORF7a88I88delATC---88B.1.1.2310.024768
ORF7a88I88MatCatG88B.1.1.70.000007
ORF7a88I88FAtcTtc88B.1.1.70.000007
ORF7a88I88TaTCaCT88B.1.3990.015474
ORF7a88I88FAtcTtc77AY.1050.004502
ORF7a88I88IatCatT77AY.1200.00026
ORF7a88I88VAtcGtc77AY.50.000145
ORF7a88I88VAtcGtc77AY.540.000667
ORF7a88I88VAtcGtc77AY.7.10.000789
ORF7a88I88IatCatT77B.1.3510.000208
ORF7a88I88delATC---77B.1.5960.00061
ORF7a88I88delATC---77C.370.000812
ORF7a88I88IatCatT66AY.1170.000507
ORF7a88I88IatCatT66AY.1190.000212
ORF7a88I88IatCatT66AY.330.000401
ORF7a88I88NaTcaAc66AY.39.10.000238
ORF7a88I88VAtcGtc66AY.430.000027
ORF7a88I88FAtcTtc66AY.610.000629
ORF7a88I88delATC---66B.1.1600.000187
ORF7a88I88delATC---66P.1.150.001394
ORF7a88I88YATcTAc55All0.000001
ORF7a88I88VAtcGtc55AY.210.009488
ORF7a88I88delATC---55AY.230.000349
ORF7a88I88delATC---55AY.420.000201
ORF7a88I88TaTcaCc55AY.440.00003
ORF7a88I88IatCatT55AY.450.000608
ORF7a88I88IatCatT55AY.46.50.000992
ORF7a88I88IatCatT55AY.60.000206
ORF7a88I88VAtcGtc55B.1.1.1940.024752
ORF7a88I88TaTcaCc55B.1.1.5190.000199
ORF7a88I88YATcTAc55B.1.1.70.000004
ORF7a88I88IatCatT55B.1.1770.000066
ORF7a88I88VAtcGtc55B.1.2580.000333
ORF7a88I88delATC---55B.1.5250.000566
ORF7a88I88VAtcGtc55B.1.5950.001305
ORF7a88I88TaTcaCc55N.40.021277
ORF7a88I88IatCatT44A.2.40.013468
ORF7a88I88KaTCaAA44All0.000001
ORF7a88I88IatCatT44AY.1100.000451
ORF7a88I88delATC---44AY.1180.000251
ORF7a88I88delATC---44AY.1190.000141
ORF7a88I88TaTcaCc44AY.1190.000141
ORF7a88I88delATC---44AY.200.000155
ORF7a88I88TaTcaCc44AY.260.000113
ORF7a88I88TaTcaCc44AY.30.00004
ORF7a88I88SaTcaGc44AY.40.000006
ORF7a88I88IatCatT44AY.4.2.10.000596
ORF7a88I88del2ATc--c44AY.430.000018
ORF7a88I88IatCatT44AY.580.00363
ORF7a88I88IatCatT44AY.740.000463
ORF7a88I88IatCatT44AY.750.000224
ORF7a88I88VAtcGtc44AY.75.10.000721
ORF7a88I88IatCatT44AY.770.00451
ORF7a88I88delATC---44AY.790.004843
ORF7a88I88IatCatT44AY.840.00175
ORF7a88I88IatCatT44AY.850.001709
ORF7a88I88IatCatT44AY.90.00027
ORF7a88I88IatCatT44AY.98.10.000194
ORF7a88I88delATC---44AY.98.10.000194
ORF7a88I88IatCatT44B.1.1.1570.003653
ORF7a88I88IatCatT44B.1.1.3010.004717
ORF7a88I88VAtcGtc44B.1.1.4090.011331
ORF7a88I88IatCatT44B.1.1.5190.000159
ORF7a88I88IatCatA24B.1.1600.000062
ORF7a88I88IatCatT24B.1.1600.000062
ORF7a88I88IatCatT44B.1.360.000584
ORF7a88I88IatCatT44B.1.617.10.000516
ORF7a88I88IatCatT44C.370.000464
ORF7a88I88delATC---44Q.80.00066
ORF7a88I88IatCatT33AY.1000.000138
ORF7a88I88IatCatT33AY.1180.000188
ORF7a88I88MatCatG33AY.250.000018
ORF7a88I88TaTcaCc33AY.250.000018
ORF7a88I88VAtcGtc33AY.30.00003
ORF7a88I88IatCatT23AY.3.10.000171
ORF7a88I88IatCatA13AY.3.10.000085
ORF7a88I88IatCatT33AY.34.10.00153
ORF7a88I88TaTcaCc33AY.390.000074
ORF7a88I88delATC---33AY.4.20.000065
ORF7a88I88VAtcGtc33AY.4.20.000065
ORF7a88I88TaTcaCc33AY.4.20.000065
ORF7a88I88delATC---33AY.4.50.000322
ORF7a88I88FAtcTtc33AY.440.000018
ORF7a88I88delATC---33AY.46.40.000494
ORF7a88I88delATC---33AY.470.000093
ORF7a88I88IatCatT33AY.570.001969
ORF7a88I88VAtcGtc33AY.610.000314
ORF7a88I88IatCatT23AY.7.10.000225
ORF7a88I88IatCatA13AY.7.10.000113
ORF7a88I88VAtcGtc33AY.850.001282
ORF7a88I88IatCatT33AY.920.000862
ORF7a88I88IatCatT33AY.99.20.000276
ORF7a88I88VAtcGtc33B.10.000027
ORF7a88I88delATC---33B.1.1.1210.007282
ORF7a88I88delATC---33B.1.1.250.001706
ORF7a88I88VAtcGtc33B.1.1.2770.002276
ORF7a88I88VAtcGtc33B.1.1600.000094
ORF7a88I88FAtcTtc33B.1.1770.00004
ORF7a88I88KaTCaAA33B.1.177.210.000229
ORF7a88I88IatCatT33B.1.177.810.000568
ORF7a88I88TaTcaCc33B.1.20.000026
ORF7a88I88IatCatT33B.1.2210.000213
ORF7a88I88delATC---33B.1.2340.000396
ORF7a88I88SaTcaGc33B.1.2580.0002
ORF7a88I88IatCatT33B.1.2580.0002
ORF7a88I88IatCatT33B.1.5260.000071
ORF7a88I88delATC---33B.1.5750.00091
ORF7a88I88TaTcaCc33B.1.5770.002062
ORF7a88I88IatCatT33B.1.5960.000261
ORF7a88I88VAtcGtc33B.1.617.10.000387
ORF7a88I88NaTcaAc33B.1.617.20.000011
ORF7a88I88delATC---33B.1.6260.017143
ORF7a88I88IatCatA23B.1.6370.000146
ORF7a88I88IatCatT13B.1.6370.000073
ORF7a88I88VAtcGtc33B.1.930.002801
ORF7a88I88IatCatT33P.1.140.000143
ORF7a88I88delATC---33Q.10.000379
ORF7a88I88delATC---220.111111
ORF7a88I88delATC---22A0.000774
ORF7a88I88delATC---22A.280.005291
ORF7a88I88TaTcaCc22AY.1000.000092
ORF7a88I88VAtcGtc22AY.1020.000053
ORF7a88I88FAtcTtc22AY.1030.000012
ORF7a88I88del1Atc-tc12AY.1030.000006
ORF7a88I88del1ATC-NN12AY.1030.000006
ORF7a88I88delATC---22AY.1060.00067
ORF7a88I88delATC---22AY.1080.002205
ORF7a88I88TaTcaCc22AY.1100.000225
ORF7a88I88delATC---22AY.1140.000462
ORF7a88I88TaTcaCc22AY.1180.000125
ORF7a88I88delATC---22AY.120.000632
ORF7a88I88VAtcGtc22AY.1200.000074
ORF7a88I88IatCatT22AY.1210.000271
ORF7a88I88SaTcaGc22AY.1210.000271
ORF7a88I88IatCatT22AY.140.000176
ORF7a88I88delATC---22AY.160.000759
ORF7a88I88TaTcaCc22AY.200.000078
ORF7a88I88IatCatT22AY.240.000862
ORF7a88I88delATC---22AY.240.000862
ORF7a88I88VAtcGtc22AY.250.000012
ORF7a88I88FAtcTtc22AY.290.000032
ORF7a88I88delATC---22AY.29.10.000441
ORF7a88I88IatCatT22AY.29.10.000441
ORF7a88I88delATC---22AY.330.000134
ORF7a88I88delATC---22AY.340.000194
ORF7a88I88delATC---22AY.360.000296
ORF7a88I88IatCatT22AY.39.10.000079
ORF7a88I88VAtcGtc22AY.39.10.000079
ORF7a88I88MatCatG22AY.40.000003
ORF7a88I88del1Atc-tc12AY.40.000002
ORF7a88I88del1aTCa-N12AY.40.000002
ORF7a88I88IatCatT22AY.4.40.000818
ORF7a88I88IatCatT22AY.400.001929
ORF7a88I88del1atCat-22AY.440.000012
ORF7a88I88delATC---22AY.450.000243
ORF7a88I88delATC---22AY.50.000041
ORF7a88I88del2ATc--c22AY.750.000112
ORF7a88I88delATC---22AY.9.10.000167
ORF7a88I88delATC---22AY.9.20.000073
ORF7a88I88SaTcaGc22AY.9.20.000073
ORF7a88I88delATC---22AY.990.002099
ORF7a88I88delATC---22B0.000256
ORF7a88I88FAtcTtc22B.10.000018
ORF7a88I88EATCGAA22B.10.000018
ORF7a88I88FAtcTtc22B.1.10.000036
ORF7a88I88NaTcaAc22B.1.10.000036
ORF7a88I88IatCatT22B.1.1.1530.002191
ORF7a88I88IatCatT22B.1.1.1890.003026
ORF7a88I88VAtcGtc22B.1.1.1980.002937
ORF7a88I88VAtcGtc22B.1.1.2540.022472
ORF7a88I88IatCatT22B.1.1.2840.000215
ORF7a88I88VAtcGtc22B.1.1.2980.001724
ORF7a88I88VAtcGtc22B.1.1.3850.008929
ORF7a88I88VAtcGtc22B.1.1.4190.014815
ORF7a88I88VAtcGtc22B.1.1.4300.083333
ORF7a88I88TaTcaCc22B.1.1.4340.000697
ORF7a88I88del1Atc-tc12B.1.1.70.000001
ORF7a88I88del1ATC-NN12B.1.1.70.000001
ORF7a88I88TaTcaCc22B.1.1600.000062
ORF7a88I88FAtcTtc22B.1.1600.000062
ORF7a88I88TaTcaCc22B.1.1770.000026
ORF7a88I88delATC---22B.1.177.150.001262
ORF7a88I88delATC---22B.1.177.860.000367
ORF7a88I88SaTcaGc22B.1.20.000018
ORF7a88I88VAtcGtc22B.1.20.000018
ORF7a88I88delATC---22B.1.214.20.001199
ORF7a88I88FAtcTtc22B.1.2210.000142
ORF7a88I88delATC---22B.1.258.110.000793
ORF7a88I88FAtcTtc22B.1.3510.000059
ORF7a88I88NaTcaAc22B.1.3510.000059
ORF7a88I88delATC---22B.1.360.000292
ORF7a88I88NaTcaAc22B.1.36.10.002281
ORF7a88I88IatCatT22B.1.4270.000101
ORF7a88I88delATC---22B.1.4270.000101
ORF7a88I88delATC---22B.1.4290.000047
ORF7a88I88VAtcGtc22B.1.5260.000047
ORF7a88I88TaTcaCc22B.1.617.10.000258
ORF7a88I88SaTcaGc22B.1.9.50.011364
ORF7a88I88IatCatT22P.1.17.10.00175
ORF7a88I88IatCatT22Q.10.000253
ORF7a88I88LAtcCtc110.055556
ORF7a88I88delATC---11A.10.000282
ORF7a88I88delATC---11A.2.20.001689
ORF7a88I88TaTcaCc11A.2.40.003367
ORF7a88I88FAtcTtc11A.2.50.000499
ORF7a88I88TaTcaCc11AD.20.000219
ORF7a88I88RaTCaGA11All0
ORF7a88I88AATcGCc11All0
ORF7a88I88TaTcaCc11AU.10.001266
ORF7a88I88IatCatT11AU.30.00211
ORF7a88I88delATC---11AY.1010.00049
ORF7a88I88NaTcaAc11AY.1020.000027
ORF7a88I88FAtcTtc11AY.1020.000027
ORF7a88I88VAtcGtc11AY.1040.001984
ORF7a88I88TaTcaCc11AY.1040.001984
ORF7a88I88IatCatT11AY.1040.001984
ORF7a88I88IatCatT11AY.1050.000643
ORF7a88I88TaTcaCc11AY.1050.000643
ORF7a88I88IatCatT11AY.1060.000335
ORF7a88I88VAtcGtc11AY.1110.000183
ORF7a88I88VAtcGtc11AY.1130.000142
ORF7a88I88delATC---11AY.1130.000142
ORF7a88I88IatCatT11AY.1160.000287
ORF7a88I88delATC---11AY.1160.000287
ORF7a88I88delATC---11AY.116.10.000311
ORF7a88I88delATC---11AY.1170.000085
ORF7a88I88VAtcGtc11AY.1180.000063
ORF7a88I88del2ATc--c11AY.1190.000035
ORF7a88I88VAtcGtc11AY.1190.000035
ORF7a88I88FAtcTtc11AY.120.000316
ORF7a88I88TaTcaCc11AY.120.2.10.000498
ORF7a88I88IatCatT11AY.120.2.10.000498
ORF7a88I88FAtCTtT11AY.1210.000135
ORF7a88I88delATC---11AY.130.000161
ORF7a88I88delATC---11AY.140.000088
ORF7a88I88IatCatT11AY.160.00038
ORF7a88I88IatCatT11AY.16.10.00047
ORF7a88I88delATC---11AY.190.00114
ORF7a88I88VAtcGtc11AY.200.000039
ORF7a88I88FAtcTtc11AY.250.000006
ORF7a88I88del1atCat-11AY.250.000006
ORF7a88I88FAtcTtc11AY.260.000028
ORF7a88I88delATC---11AY.270.000065
ORF7a88I88IatCatT11AY.280.00189
ORF7a88I88TaTcaCc11AY.29.10.000221
ORF7a88I88FAtcTtc11AY.30.00001
ORF7a88I88del2ATc--c11AY.3.10.000085
ORF7a88I88delATC---11AY.300.000396
ORF7a88I88FAtcTtc11AY.320.000532
ORF7a88I88del1AtC-tN11AY.330.000067
ORF7a88I88IatCatT11AY.350.000233
ORF7a88I88IatCatT11AY.360.000148
ORF7a88I88TaTcaCc11AY.380.000499
ORF7a88I88del1atCat-11AY.390.000025
ORF7a88I88FAtcTtc11AY.390.000025
ORF7a88I88LAtcCtc11AY.40.000002
ORF7a88I88del1atCat-11AY.4.2.10.000149
ORF7a88I88TaTcaCc11AY.4.2.10.000149
ORF7a88I88VAtcGtc11AY.4.50.000107
ORF7a88I88IatCatT11AY.410.000294
ORF7a88I88TaTcaCc11AY.420.00004
ORF7a88I88RaTCaGA11AY.440.000006
ORF7a88I88TaTcaCc11AY.460.000104
ORF7a88I88del1aTca-c11AY.46.20.000635
ORF7a88I88IatCatT11AY.46.40.000165
ORF7a88I88VAtcGtc11AY.470.000031
ORF7a88I88TaTcaCc11AY.470.000031
ORF7a88I88delATC---11AY.5.30.000337
ORF7a88I88FAtcTtc11AY.5.30.000337
ORF7a88I88IatCatT11AY.5.30.000337
ORF7a88I88IatCatT11AY.5.40.000277
ORF7a88I88IatCatT11AY.510.000909
ORF7a88I88delATC---11AY.530.000288
ORF7a88I88delATC---11AY.540.000095
ORF7a88I88TaTcaCc11AY.60.000041
ORF7a88I88LAtcCtc11AY.60.000041
ORF7a88I88delATC---11AY.610.000105
ORF7a88I88IatCatT11AY.620.000436
ORF7a88I88IatCatT11AY.630.000387
ORF7a88I88delATC---11AY.680.000274
ORF7a88I88delATC---11AY.690.000187
ORF7a88I88IatCatT11AY.70.000196
ORF7a88I88FAtcTtc11AY.7.10.000113
ORF7a88I88delATC---11AY.7.10.000113
ORF7a88I88del2ATCG--11AY.7.20.000559
ORF7a88I88delATC---11AY.710.000475
ORF7a88I88IatCatT11AY.720.001361
ORF7a88I88TaTCaCT11AY.730.000665
ORF7a88I88TaTcaCc11AY.750.000056
ORF7a88I88delATC---11AY.750.000056
ORF7a88I88delATC---11AY.75.10.00018
ORF7a88I88SaTcaGc11AY.790.001211
ORF7a88I88IatCatT11AY.80.000606
ORF7a88I88IatCatT11AY.810.001992
ORF7a88I88del1Atc-tc11AY.820.001357
ORF7a88I88SaTcaGc11AY.850.000427
ORF7a88I88FAtcTtc11AY.850.000427
ORF7a88I88delATC---11AY.850.000427
ORF7a88I88TaTcaCc11AY.870.000833
ORF7a88I88IatCatT11AY.880.000884
ORF7a88I88IatCatT11AY.890.004902
ORF7a88I88delATC---11AY.90.000068
ORF7a88I88TaTcaCc11AY.90.000068
ORF7a88I88SaTcaGc11AY.9.10.000084
ORF7a88I88delATC---11AY.910.00073
ORF7a88I88IatCatT11AY.910.00073
ORF7a88I88IatCatT11AY.930.000273
ORF7a88I88IatCatT11AY.980.000079
ORF7a88I88TaTcaCc11AY.980.000079
ORF7a88I88delATC---11AY.980.000079
ORF7a88I88SaTcaGc11AY.98.10.000048
ORF7a88I88delATC---11AY.99.20.000092
ORF7a88I88delATC---11AZ.20.000821
ORF7a88I88VAtcGtc11B0.000128
ORF7a88I88IatCatT11B0.000128
ORF7a88I88FAtcTtc11B0.000128
ORF7a88I88TaTcaCc11B0.000128
ORF7a88I88SaTcaGc11B.10.000009
ORF7a88I88IatCatT11B.1.1.10.000327
ORF7a88I88VAtcGtc11B.1.1.1220.045455
ORF7a88I88VAtcGtc11B.1.1.1280.007092
ORF7a88I88VAtcGtc11B.1.1.1370.0125
ORF7a88I88TaTcaCc11B.1.1.1410.002012
ORF7a88I88VAtcGtc11B.1.1.1450.037037
ORF7a88I88delATC---11B.1.1.1700.001247
ORF7a88I88delATC---11B.1.1.1740.003378
ORF7a88I88NaTcaAc11B.1.1.1890.001513
ORF7a88I88delATC---11B.1.1.1920.002309
ORF7a88I88IatCatA11B.1.1.2070.001182
ORF7a88I88IatCatT11B.1.1.2220.000204
ORF7a88I88LAtcCtc11B.1.1.2220.000204
ORF7a88I88delATC---11B.1.1.2220.000204
ORF7a88I88IatCatT11B.1.1.2430.004082
ORF7a88I88delATC---11B.1.1.2580.003257
ORF7a88I88FAtcTtc11B.1.1.2650.003155
ORF7a88I88delATC---11B.1.1.2650.003155
ORF7a88I88IatCatT11B.1.1.2790.001121
ORF7a88I88NaTcaAc11B.1.1.2820.011628
ORF7a88I88VAtcGtc11B.1.1.2990.012195
ORF7a88I88NaTcaAc11B.1.1.3050.003861
ORF7a88I88IatCatT11B.1.1.3060.000438
ORF7a88I88TaTcaCc11B.1.1.3170.000412
ORF7a88I88delATC---11B.1.1.3180.000302
ORF7a88I88IatCatT11B.1.1.3180.000302
ORF7a88I88delATC---11B.1.1.330.000421
ORF7a88I88TaTcaCc11B.1.1.330.000421
ORF7a88I88FAtcTtc11B.1.1.3480.000796
ORF7a88I88delATC---11B.1.1.3660.015873
ORF7a88I88FAtcTtc11B.1.1.3720.000689
ORF7a88I88IatCatT11B.1.1.3720.000689
ORF7a88I88VAtcGtc11B.1.1.3880.045455
ORF7a88I88IatCatT11B.1.1.390.00051
ORF7a88I88MatCatG11B.1.1.390.00051
ORF7a88I88TaTcaCc11B.1.1.390.00051
ORF7a88I88VAtcGtc11B.1.1.3970.002252
ORF7a88I88VAtcGtc11B.1.1.3980.003226
ORF7a88I88VAtcGtc11B.1.1.4070.041667
ORF7a88I88AATcGCc11B.1.1.4110.014706
ORF7a88I88VAtcGtc11B.1.1.4160.000905
ORF7a88I88delATC---11B.1.1.4480.002033
ORF7a88I88FAtcTtc11B.1.1.4870.005587
ORF7a88I88TaTcaCc11B.1.1.5000.02
ORF7a88I88IatCatT11B.1.1.610.008772
ORF7a88I88del2ATc--c11B.1.1.70.000001
ORF7a88I88NaTcaAc11B.1.1.70.000001
ORF7a88I88KaTCaAA11B.1.1.70.000001
ORF7a88I88delATC---11B.1.1.700.000341
ORF7a88I88VAtcGtc11B.1.1.890.006061
ORF7a88I88IatCatT11B.1.110.10.1
ORF7a88I88delATC---11B.1.1150.021739
ORF7a88I88VAtcGtc11B.1.1270.002198
ORF7a88I88IatCatT11B.1.1280.000635
ORF7a88I88TaTcaCc11B.1.160.320.004292
ORF7a88I88SaTcaGc11B.1.160.320.004292
ORF7a88I88VAtcGtc11B.1.1770.000013
ORF7a88I88NaTcaAc11B.1.1770.000013
ORF7a88I88delATC---11B.1.177.100.000878
ORF7a88I88TaTcaCc11B.1.177.210.000076
ORF7a88I88LAtcCtc11B.1.177.210.000076
ORF7a88I88IatCatT11B.1.177.210.000076
ORF7a88I88IatCatT11B.1.177.230.003236
ORF7a88I88TaTcaCc11B.1.177.300.002513
ORF7a88I88IatCatT11B.1.177.440.000519
ORF7a88I88IatCatT11B.1.177.50.001242
ORF7a88I88delATC---11B.1.177.500.004695
ORF7a88I88delATC---11B.1.177.570.000281
ORF7a88I88delATC---11B.1.177.620.001192
ORF7a88I88delATC---11B.1.177.810.000189
ORF7a88I88IatCatT11B.1.2100.002132
ORF7a88I88TaTcaCc11B.1.2210.000071
ORF7a88I88delATC---11B.1.2210.000071
ORF7a88I88IatCatT11B.1.2320.000537
ORF7a88I88TaTcaCc11B.1.2360.002053
ORF7a88I88delATC---11B.1.2400.000216
ORF7a88I88NaTcaAc11B.1.2420.018868
ORF7a88I88delATC---11B.1.2430.00007
ORF7a88I88IatCatT11B.1.2430.00007
ORF7a88I88delATC---11B.1.2580.000067
ORF7a88I88TaTcaCc11B.1.258.170.000104
ORF7a88I88delATC---11B.1.258.170.000104
ORF7a88I88delATC---11B.1.2650.001271
ORF7a88I88delATC---11B.1.3190.003049
ORF7a88I88IatCatT11B.1.3290.000608
ORF7a88I88TaTcaCc11B.1.3510.00003
ORF7a88I88delATC---11B.1.351.20.000303
ORF7a88I88FAtcTtc11B.1.351.30.000876
ORF7a88I88NaTcaAc11B.1.360.000146
ORF7a88I88VAtcGtc11B.1.36.290.000517
ORF7a88I88IatCatT11B.1.3620.001541
ORF7a88I88delATC---11B.1.3710.001122
ORF7a88I88delATC---11B.1.3750.00082
ORF7a88I88IatCatT11B.1.3910.001127
ORF7a88I88IatCatT11B.1.4080.00369
ORF7a88I88MatCatG11B.1.4160.001269
ORF7a88I88TaTcaCc11B.1.416.10.001563
ORF7a88I88SaTcaGc11B.1.4290.000024
ORF7a88I88NaTcaAc11B.1.4380.006536
ORF7a88I88VAtcGtc11B.1.438.10.000107
ORF7a88I88IatCatT11B.1.438.10.000107
ORF7a88I88TaTcaCc11B.1.4390.005917
ORF7a88I88delATC---11B.1.4590.004082
ORF7a88I88IatCatT11B.1.4670.04
ORF7a88I88delATC---11B.1.4680.005714
ORF7a88I88delATC---11B.1.4700.001404
ORF7a88I88VAtcGtc11B.1.4970.000315
ORF7a88I88TaTcaCc11B.1.4970.000315
ORF7a88I88SATcTCc11B.1.5260.000024
ORF7a88I88delATC---11B.1.5270.003704
ORF7a88I88TaTcaCc11B.1.5510.00129
ORF7a88I88TaTcaCc11B.1.5560.007519
ORF7a88I88IatCatT11B.1.5750.000303
ORF7a88I88TaTcaCc11B.1.5760.000907
ORF7a88I88delATC---11B.1.5770.000687
ORF7a88I88IatCatT11B.1.5800.004065
ORF7a88I88delATC---11B.1.5820.000491
ORF7a88I88delATC---11B.1.5950.000261
ORF7a88I88IatCatT11B.1.6090.000479
ORF7a88I88delATC---11B.1.617.10.000129
ORF7a88I88SaTcaGc11B.1.617.20.000004
ORF7a88I88delATC---11B.1.621.10.000506
ORF7a88I88IatCatT11B.1.621.10.000506
ORF7a88I88IatCatT11B.1.6250.002353
ORF7a88I88TaTcaCc11B.1.6370.000073
ORF7a88I88delATC---11B.1.6380.052632
ORF7a88I88IatCatA11B.1.760.011364
ORF7a88I88delATC---11B.1.9.10.032258
ORF7a88I88delATC---11B.1.930.000934
ORF7a88I88IatCatT11B.40.002208
ORF7a88I88IatCatT11B.4.20.066667
ORF7a88I88IatCatT11B.6.60.000889
ORF7a88I88FAtcTtc11C.360.000911
ORF7a88I88FAtcTtc11C.36.30.000567
ORF7a88I88delATC---11C.36.30.000567
ORF7a88I88IatCatT11C.36.30.000567
ORF7a88I88IatCatT11D.20.000075
ORF7a88I88IatCatT11N.50.001767
ORF7a88I88del1atCat-11P.10.000016
ORF7a88I88VAtcGtc11P.10.000016
ORF7a88I88SaTcaGc11P.10.000016
ORF7a88I88delATC---11P.1.10.000318
ORF7a88I88delATC---11P.1.120.000484
ORF7a88I88IatCatT11P.1.120.000484
ORF7a88I88delATC---11P.1.130.000898
ORF7a88I88delATC---11P.1.140.000048
ORF7a88I88IatCatT11P.1.150.000232
ORF7a88I88VAtcGtc11P.1.150.000232
ORF7a88I88delATC---11P.1.160.000374
ORF7a88I88delATC---11P.1.30.034483
ORF7a88I88delATC---11P.1.40.000977
ORF7a88I88IatCatT11P.20.000187
ORF7a88I88IatCatT11P.30.001595
ORF7a88I88TaTcaCc11P.60.003145
ORF7a88I88TaTcaCc11Q.10.000126
ORF7a88I88FAtcTtc11Q.30.000145
ORF7a88I88delATC---11Q.70.001111
ORF7a88I88VAtcGtc11R.10.00009
ORF7a88I88IatCatT11R.10.00009