CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 87 & Codon = tCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a87F87SnonsyntTctCc96950.98958327652-27654

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a87F87StTctCc9596All0.000018
ORF7a87F87StTctCc3435B.1.1.70.00003
ORF7a87F87StTctCc1212AY.1180.000752
ORF7a87F87StTctCc1010AY.40.000016
ORF7a87F87StTctCc55B.10.000046
ORF7a87F87StTctCc55B.1.617.20.000019
ORF7a87F87StTctCc44AY.30.00004
ORF7a87F87StTctCc44B.1.4290.000094
ORF7a87F87StTctCc22AY.1030.000012
ORF7a87F87StTctCc22AY.250.000012
ORF7a87F87StTctCc22AY.290.000032
ORF7a87F87StTctCc22B.1.5960.000174
ORF7a87F87StTctCc11AL.10.012987
ORF7a87F87StTctCc11AY.1040.001984
ORF7a87F87StTctCc11AY.1200.000037
ORF7a87F87StTctCc11AY.440.000006
ORF7a87F87StTctCc11AY.520.000814
ORF7a87F87StTctCc11AY.60.000041
ORF7a87F87StTctCc11B.1.10.000018
ORF7a87F87StTctCc11B.1.1600.000031
ORF7a87F87StTctCc11B.1.2430.00007
ORF7a87F87StTctCc11B.1.3010.005917
ORF7a87F87StTctCc11B.1.36.270.000763
ORF7a87F87StTctCc11B.1.4600.017857
ORF7a87F87StTctCc11B.1.4970.000315