CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 87

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a87F87FsynttCttT78917891127652-27654
ORF7a87F87deldelTTC---19861986127652-27654
ORF7a87F87LnonsynttCttG4852490.51340227652-27654
ORF7a87F87LnonsynTtcCtc4851710.35257727652-27654
ORF7a87F87LnonsynttCttA485640.13195927652-27654
ORF7a87F87LnonsynTtCCtA48510.0020618627652-27654
ORF7a87F87SnonsyntTctCc96950.98958327652-27654
ORF7a87F87SnonsyntTCtCT9610.010416727652-27654
ORF7a87F87VnonsynTtcGtc6464127652-27654
ORF7a87F87del2delTTc--c64590.92187527652-27654
ORF7a87F87del2deltTCt--6430.04687527652-27654
ORF7a87F87del2delTTC--N6420.0312527652-27654
ORF7a87F87InonsynTtcAtc5151127652-27654
ORF7a87F87YnonsyntTctAc34320.94117627652-27654
ORF7a87F87YnonsyntTCtAT3420.058823527652-27654
ORF7a87F87del1delTtc-tc25130.5227652-27654
ORF7a87F87del1delttCtt-25100.427652-27654
ORF7a87F87del1delTTC-NN2510.0427652-27654
ORF7a87F87del1delTTC-AG2510.0427652-27654
ORF7a87F87CnonsyntTctGc1919127652-27654
ORF7a87F87HnonsynTTCCAT14110.78571427652-27654
ORF7a87F87HnonsynTTcCAc1430.21428627652-27654
ORF7a87F87NnonsynTTcAAc55127652-27654
ORF7a87F87KnonsynTTCAAA33127652-27654
ORF7a87F87GnonsynTTcGGc22127652-27654
ORF7a87F87QnonsynTTCCAA22127652-27654
ORF7a87F87XnonsyntTCtAA11127652-27654
ORF7a87F87TnonsynTTcACc11127652-27654

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a87F87FttCttT78917891All0.001509
ORF7a87F87delTTC---19861986All0.00038
ORF7a87F87FttCttT18621862AY.30.01852
ORF7a87F87FttCttT13971397AY.40.002174
ORF7a87F87FttCttT659659B.1.1.70.00059
ORF7a87F87delTTC---534534B.1.1.70.000478
ORF7a87F87LttCttG249485All0.000048
ORF7a87F87LTtcCtc171485All0.000033
ORF7a87F87LttCttA64485All0.000012
ORF7a87F87LTtCCtA1485All0
ORF7a87F87FttCttT392392B.1.6210.034699
ORF7a87F87FttCttT371371AY.390.009168
ORF7a87F87FttCttT350350B.1.617.20.001318
ORF7a87F87FttCttT332332AY.290.005237
ORF7a87F87FttCttT289289AY.440.001759
ORF7a87F87delTTC---245245AY.40.000381
ORF7a87F87FttCttT185185P.10.002914
ORF7a87F87delTTC---176176B.1.177.210.013459
ORF7a87F87FttCttT123123B.1.20.001083
ORF7a87F87FttCttT9797AY.1030.000602
ORF7a87F87FttCttT9797B.1.220.1278
ORF7a87F87StTctCc9596All0.000018
ORF7a87F87StTCtCT196All0
ORF7a87F87FttCttT9595AY.4.20.00206
ORF7a87F87FttCttT9494AY.430.000416
ORF7a87F87FttCttT8383B.1.5950.02166
ORF7a87F87delTTC---8282AY.290.001293
ORF7a87F87LTtcCtc5177B.1.1.70.000046
ORF7a87F87LttCttG2477B.1.1.70.000021
ORF7a87F87LttCttA277B.1.1.70.000002
ORF7a87F87FttCttT6666AY.250.000397
ORF7a87F87VTtcGtc6464All0.000012
ORF7a87F87del2TTc--c5964All0.000011
ORF7a87F87del2tTCt--364All0.000001
ORF7a87F87del2TTC--N264All0
ORF7a87F87FttCttT6262B.1.2210.004404
ORF7a87F87delTTC---6161AY.430.00027
ORF7a87F87FttCttT6161B.1.177.360.983871
ORF7a87F87delTTC---5454AY.1030.000335
ORF7a87F87LttCttG2654B.1.20.000229
ORF7a87F87LttCttA2654B.1.20.000229
ORF7a87F87LTtcCtc254B.1.20.000018
ORF7a87F87FttCttT5252AY.5.30.017544
ORF7a87F87ITtcAtc5151All0.00001
ORF7a87F87delTTC---5151AY.250.000307
ORF7a87F87FttCttT4848AY.1020.001273
ORF7a87F87LttCttG4444B.1.1690.656716
ORF7a87F87FttCttT4242AY.1170.00355
ORF7a87F87FttCttT4242B.1.1.1650.646154
ORF7a87F87FttCttT3838AY.260.001076
ORF7a87F87delTTC---3838AY.30.000378
ORF7a87F87delTTC---3838AY.390.000939
ORF7a87F87delTTC---3838B.1.617.20.000143
ORF7a87F87delTTC---3737B.1.1.2840.003974
ORF7a87F87FttCttT3636B.1.10.000653
ORF7a87F87StTctCc3435B.1.1.70.00003
ORF7a87F87StTCtCT135B.1.1.70.000001
ORF7a87F87YtTctAc3234All0.000006
ORF7a87F87YtTCtAT234All0
ORF7a87F87FttCttT3434AY.1000.001564
ORF7a87F87delTTC---3434B.1.6210.00301
ORF7a87F87LTtcCtc3333B.1.4970.010387
ORF7a87F87delTTC---3131AY.440.000189
ORF7a87F87FttCttT3131B.1.6230.016631
ORF7a87F87FttCttT3030B.1.177.350.020733
ORF7a87F87LttCttG2729B.1.1.2910.020045
ORF7a87F87LTtcCtc229B.1.1.2910.001485
ORF7a87F87delTTC---2929B.1.20.000255
ORF7a87F87FttCttT2828AY.46.60.002022
ORF7a87F87FttCttT2828B.1.1600.000873
ORF7a87F87FttCttT2828B.1.4290.000659
ORF7a87F87delTTC---2727B.10.000247
ORF7a87F87delTTC---2626AY.750.001457
ORF7a87F87LttCttG1426B.10.000128
ORF7a87F87LttCttA726B.10.000064
ORF7a87F87LTtcCtc526B.10.000046
ORF7a87F87ITtcAtc2626B.1.1.70.000023
ORF7a87F87del1Ttc-tc1325All0.000002
ORF7a87F87del1ttCtt-1025All0.000002
ORF7a87F87del1TTC-AG125All0
ORF7a87F87del1TTC-NN125All0
ORF7a87F87delTTC---2525AY.3.10.002131
ORF7a87F87LttCttG2525B.1.3330.263158
ORF7a87F87FttCttT2424AY.470.000747
ORF7a87F87FttCttT2424AY.99.20.002212
ORF7a87F87FttCttT2424B.1.3960.016937
ORF7a87F87del2TTc--c2123AY.250.000126
ORF7a87F87del2tTCt--223AY.250.000012
ORF7a87F87delTTC---2323B.1.1.2140.001276
ORF7a87F87FttCttT2222B.10.000202
ORF7a87F87FttCttT2222D.20.001651
ORF7a87F87FttCttT2121AY.200.000816
ORF7a87F87VTtcGtc2121AY.250.000126
ORF7a87F87FttCttT2121AY.60.000864
ORF7a87F87delTTC---2020AY.7.20.011186
ORF7a87F87FttCttT2020AY.950.015221
ORF7a87F87CtTctGc1919All0.000004
ORF7a87F87LTtcCtc1318AY.40.00002
ORF7a87F87LttCttG318AY.40.000005
ORF7a87F87LttCttA218AY.40.000003
ORF7a87F87LTtcCtc1218B.1.1770.000158
ORF7a87F87LttCttA518B.1.1770.000066
ORF7a87F87LttCttG118B.1.1770.000013
ORF7a87F87FttCttT1818B.1.2430.001253
ORF7a87F87delTTC---1818B.1.5260.000423
ORF7a87F87LttCttG1717B.1.4460.34
ORF7a87F87delTTC---1717P.10.000268
ORF7a87F87FttCttT1616AY.1190.000565
ORF7a87F87delTTC---1616AY.1190.000565
ORF7a87F87FttCttT1616AY.39.10.000634
ORF7a87F87FttCttT1616AY.540.001526
ORF7a87F87FttCttT1616B.1.3510.000476
ORF7a87F87delTTC---1515AY.260.000425
ORF7a87F87del2TTc--c1415AY.30.000139
ORF7a87F87del2tTCt--115AY.30.00001
ORF7a87F87FttCttT1515AY.800.01693
ORF7a87F87HTTCCAT1114All0.000002
ORF7a87F87HTTcCAc314All0.000001
ORF7a87F87delTTC---1414B.1.1770.000184
ORF7a87F87FttCttT1414B.1.3820.125
ORF7a87F87delTTC---1313AY.46.40.002139
ORF7a87F87FttCttT1313AY.50.000268
ORF7a87F87FttCttT1313AY.750.000728
ORF7a87F87StTctCc1212AY.1180.000752
ORF7a87F87FttCttT1212AY.460.001249
ORF7a87F87FttCttT1212AY.90.000811
ORF7a87F87FttCttT1212B.1.160.260.029056
ORF7a87F87delTTC---1212B.1.3240.019262
ORF7a87F87delTTC---1111AY.1000.000506
ORF7a87F87delTTC---1111AY.1210.001488
ORF7a87F87FttCttT1111AY.360.00163
ORF7a87F87FttCttT1111B.1.1.5190.000437
ORF7a87F87HTTCCAT911B.1.177.210.000688
ORF7a87F87HTTcCAc211B.1.177.210.000153
ORF7a87F87delTTC---1111B.1.6370.000804
ORF7a87F87FttCttT1010AY.1210.001353
ORF7a87F87FttCttT1010AY.330.000668
ORF7a87F87StTctCc1010AY.40.000016
ORF7a87F87FttCttT1010B.1.5260.000235
ORF7a87F87delTTC---99AY.1100.001014
ORF7a87F87delTTC---99AY.1200.000335
ORF7a87F87FttCttT99AY.1200.000335
ORF7a87F87FttCttT99AY.230.000628
ORF7a87F87FttCttT99AY.420.000362
ORF7a87F87FttCttT99B.1.1770.000119
ORF7a87F87delTTC---99B.1.3510.000268
ORF7a87F87FttCttT99B.1.36.180.003782
ORF7a87F87delTTC---99R.10.00081
ORF7a87F87FttCttT88AY.1060.002679
ORF7a87F87FttCttT88AY.1100.000902
ORF7a87F87FttCttT88AY.1180.000501
ORF7a87F87FttCttT88AY.29.10.001764
ORF7a87F87FttCttT88AY.4.50.00086
ORF7a87F87FttCttT88AY.610.000838
ORF7a87F87delTTC---88B.1.10.000145
ORF7a87F87delTTC---88B.1.1.2310.024768
ORF7a87F87LttCttA67AY.250.000036
ORF7a87F87del1ttCtt-67AY.250.000036
ORF7a87F87del1Ttc-tc17AY.250.000006
ORF7a87F87LTtcCtc17AY.250.000006
ORF7a87F87LTtcCtc57AY.30.00005
ORF7a87F87LttCttG27AY.30.00002
ORF7a87F87FttCttT77B.1.1.3120.013384
ORF7a87F87FttCttT77B.1.177.830.01037
ORF7a87F87YtTctAc77B.1.177.860.001284
ORF7a87F87FttCttT77B.1.5750.002124
ORF7a87F87delTTC---77B.1.5960.00061
ORF7a87F87delTTC---77C.370.000812
ORF7a87F87LttCttG77P.10.00011
ORF7a87F87FttCttT66AY.3.10.000512
ORF7a87F87FttCttT66AY.340.000582
ORF7a87F87FttCttT66B.1.1.370.001157
ORF7a87F87delTTC---66B.1.1600.000187
ORF7a87F87FttCttT66B.1.3110.001647
ORF7a87F87FttCttT66B.1.36.80.006
ORF7a87F87FttCttT66B.1.5250.000679
ORF7a87F87delTTC---66P.1.150.001394
ORF7a87F87FttCttT66Q.30.00087
ORF7a87F87NTTcAAc55All0.000001
ORF7a87F87delTTC---55AY.1060.001674
ORF7a87F87FttCttT55AY.1130.000712
ORF7a87F87FttCttT55AY.210.009488
ORF7a87F87delTTC---55AY.230.000349
ORF7a87F87delTTC---55AY.420.000201
ORF7a87F87LttCttA35AY.430.000013
ORF7a87F87LTtcCtc15AY.430.000004
ORF7a87F87LttCttG15AY.430.000004
ORF7a87F87LTtcCtc55AY.440.00003
ORF7a87F87StTctCc55B.10.000046
ORF7a87F87YtTctAc55B.1.10.000091
ORF7a87F87delTTC---55B.1.1.5190.000199
ORF7a87F87del2TTc--c55B.1.1.70.000004
ORF7a87F87LTtcCtc45B.1.1600.000125
ORF7a87F87LttCttA15B.1.1600.000031
ORF7a87F87LttCttG55B.1.3410.113636
ORF7a87F87FttCttT55B.1.4270.000252
ORF7a87F87FttCttT55B.1.5170.002135
ORF7a87F87LttCttG55B.1.5250.000566
ORF7a87F87delTTC---55B.1.5250.000566
ORF7a87F87StTctCc55B.1.617.20.000019
ORF7a87F87LttCttG45B.1.617.20.000015
ORF7a87F87LttCttA15B.1.617.20.000004
ORF7a87F87VTtcGtc44AY.1030.000025
ORF7a87F87delTTC---44AY.1180.000251
ORF7a87F87FttCttT44AY.160.001519
ORF7a87F87FttCttT44AY.20.001425
ORF7a87F87delTTC---44AY.200.000155
ORF7a87F87del2TTc--c44AY.290.000063
ORF7a87F87StTctCc44AY.30.00004
ORF7a87F87YtTctAc44AY.40.000006
ORF7a87F87CtTctGc44AY.470.000124
ORF7a87F87del1ttCtt-44AY.790.004843
ORF7a87F87delTTC---44AY.98.10.000194
ORF7a87F87FttCttT44AZ.20.003284
ORF7a87F87FttCttT44B.1.1.2770.003035
ORF7a87F87FttCttT44B.1.1.3060.001754
ORF7a87F87NTTcAAc44B.1.1.70.000004
ORF7a87F87CtTctGc44B.1.1.70.000004
ORF7a87F87del1Ttc-tc44B.1.1600.000125
ORF7a87F87FttCttT44B.1.177.870.002911
ORF7a87F87FttCttT44B.1.2340.000528
ORF7a87F87FttCttT44B.1.3050.008602
ORF7a87F87StTctCc44B.1.4290.000094
ORF7a87F87FttCttT44B.1.4710.010929
ORF7a87F87FttCttT44B.1.5820.001963
ORF7a87F87FttCttT44B.1.6070.210526
ORF7a87F87FttCttT44B.1.617.10.000516
ORF7a87F87YtTctAc44B.1.617.10.000516
ORF7a87F87FttCttT44P.1.120.001936
ORF7a87F87FttCttT44P.1.140.000191
ORF7a87F87delTTC---44Q.80.00066
ORF7a87F87LttCttG33A.10.000846
ORF7a87F87FttCttT33A.2.50.001497
ORF7a87F87FttCttT33A.23.10.002113
ORF7a87F87KTTCAAA33All0.000001
ORF7a87F87del1Ttc-tc33AY.1000.000138
ORF7a87F87FttCttT33AY.1070.001398
ORF7a87F87FttCttT33AY.1160.00086
ORF7a87F87FttCttT33AY.116.10.000934
ORF7a87F87FttCttT33AY.16.10.00141
ORF7a87F87FttCttT33AY.23.10.001252
ORF7a87F87YtTctAc33AY.250.000018
ORF7a87F87CtTctGc33AY.250.000018
ORF7a87F87FttCttT33AY.270.000194
ORF7a87F87VTtcGtc33AY.30.00003
ORF7a87F87delTTC---33AY.330.0002
ORF7a87F87delTTC---33AY.360.000445
ORF7a87F87delTTC---33AY.4.20.000065
ORF7a87F87delTTC---33AY.4.50.000322
ORF7a87F87del1Ttc-tc23AY.430.000009
ORF7a87F87del1TTC-AG13AY.430.000004
ORF7a87F87delTTC---33AY.470.000093
ORF7a87F87delTTC---33AY.50.000062
ORF7a87F87FttCttT33AY.680.000821
ORF7a87F87FttCttT33AY.700.000626
ORF7a87F87LTtcCtc33AY.750.000168
ORF7a87F87FttCttT33AY.840.001312
ORF7a87F87FttCttT33AY.9.10.000251
ORF7a87F87VTtcGtc33AY.9.20.00011
ORF7a87F87FttCttT33AY.98.10.000145
ORF7a87F87ITtcAtc33B.10.000027
ORF7a87F87LTtcCtc33B.1.10.000054
ORF7a87F87VTtcGtc33B.1.10.000054
ORF7a87F87delTTC---33B.1.1.1210.007282
ORF7a87F87LTtcCtc23B.1.1.2220.000408
ORF7a87F87LttCttG13B.1.1.2220.000204
ORF7a87F87delTTC---33B.1.1.250.001706
ORF7a87F87FttCttT33B.1.1.5230.004687
ORF7a87F87FttCttT33B.1.1.540.009063
ORF7a87F87FttCttT33B.1.1.700.001023
ORF7a87F87LttCttG33B.1.1.980.055556
ORF7a87F87ITtcAtc33B.1.2100.006397
ORF7a87F87FttCttT33B.1.2320.001612
ORF7a87F87delTTC---33B.1.2340.000396
ORF7a87F87LttCttG33B.1.2400.000647
ORF7a87F87LttCttG33B.1.2430.000209
ORF7a87F87FttCttT33B.1.2580.0002
ORF7a87F87LTtcCtc33B.1.258.170.000312
ORF7a87F87LttCttG33B.1.3710.003367
ORF7a87F87LTtcCtc23B.1.3960.001411
ORF7a87F87LttCttG13B.1.3960.000706
ORF7a87F87delTTC---33B.1.5750.00091
ORF7a87F87FttCttT33B.1.621.10.001517
ORF7a87F87delTTC---33B.1.6260.017143
ORF7a87F87FttCttT33B.1.6370.000219
ORF7a87F87FttCttT33C.36.30.001702
ORF7a87F87delTTC---33Q.10.000379
ORF7a87F87delTTC---220.111111
ORF7a87F87delTTC---22A0.000774
ORF7a87F87delTTC---22A.280.005291
ORF7a87F87QTTCCAA22All0
ORF7a87F87GTTcGGc22All0
ORF7a87F87LTtcCtc22AY.1020.000053
ORF7a87F87StTctCc22AY.1030.000012
ORF7a87F87FttCttT22AY.1050.001286
ORF7a87F87delTTC---22AY.1080.002205
ORF7a87F87FttCttT22AY.1080.002205
ORF7a87F87FttCttT22AY.1110.000366
ORF7a87F87delTTC---22AY.1140.000462
ORF7a87F87delTTC---22AY.120.000632
ORF7a87F87FttCttT22AY.130.000322
ORF7a87F87FttCttT22AY.140.000176
ORF7a87F87delTTC---22AY.160.000759
ORF7a87F87LttCttG12AY.230.00007
ORF7a87F87LTtcCtc12AY.230.00007
ORF7a87F87delTTC---22AY.240.000862
ORF7a87F87StTctCc22AY.250.000012
ORF7a87F87del2TTc--c22AY.260.000057
ORF7a87F87StTctCc22AY.290.000032
ORF7a87F87delTTC---22AY.29.10.000441
ORF7a87F87delTTC---22AY.340.000194
ORF7a87F87FttCttT22AY.370.000632
ORF7a87F87FttCttT22AY.380.000999
ORF7a87F87del2TTc--c22AY.40.000003
ORF7a87F87FttCttT22AY.4.2.10.000298
ORF7a87F87FttCttT22AY.4.40.000818
ORF7a87F87FttCttT22AY.410.000588
ORF7a87F87YtTctAc22AY.430.000009
ORF7a87F87ITtcAtc22AY.430.000009
ORF7a87F87CtTctGc22AY.440.000012
ORF7a87F87delTTC---22AY.450.000243
ORF7a87F87del2TTc--c22AY.470.000062
ORF7a87F87FttCttT22AY.480.00093
ORF7a87F87FttCttT22AY.590.001059
ORF7a87F87FttCttT22AY.620.000871
ORF7a87F87FttCttT22AY.670.000929
ORF7a87F87FttCttT22AY.760.009662
ORF7a87F87delTTC---22AY.9.10.000167
ORF7a87F87LTtcCtc22AY.9.20.000073
ORF7a87F87delTTC---22AY.9.20.000073
ORF7a87F87FttCttT22AY.9.20.000073
ORF7a87F87FttCttT22AY.9.2.10.003953
ORF7a87F87FttCttT22AY.910.001461
ORF7a87F87FttCttT22AY.980.000158
ORF7a87F87delTTC---22AY.990.002099
ORF7a87F87delTTC---22B0.000256
ORF7a87F87HTTCCAT22B.10.000018
ORF7a87F87ITtcAtc22B.1.10.000036
ORF7a87F87FttCttT22B.1.1.2220.000408
ORF7a87F87LttCttG22B.1.1.2280.006098
ORF7a87F87FttCttT22B.1.1.2390.064516
ORF7a87F87LttCttG22B.1.1.260.010471
ORF7a87F87FttCttT22B.1.1.2630.003115
ORF7a87F87delTTC---22B.1.1.2650.006309
ORF7a87F87FttCttT22B.1.1.2840.000215
ORF7a87F87FttCttT22B.1.1.3170.000823
ORF7a87F87FttCttT22B.1.1.330.000842
ORF7a87F87FttCttT22B.1.1470.001512
ORF7a87F87delTTC---22B.1.177.150.001262
ORF7a87F87KTTCAAA22B.1.177.210.000153
ORF7a87F87QTTCCAA22B.1.177.210.000153
ORF7a87F87delTTC---22B.1.177.860.000367
ORF7a87F87YtTctAc22B.1.2140.007326
ORF7a87F87delTTC---22B.1.214.20.001199
ORF7a87F87delTTC---22B.1.258.110.000793
ORF7a87F87LTtcCtc22B.1.3490.00143
ORF7a87F87VTtcGtc22B.1.3510.000059
ORF7a87F87delTTC---22B.1.351.20.000605
ORF7a87F87delTTC---22B.1.360.000292
ORF7a87F87FttCttT22B.1.360.000292
ORF7a87F87VTtcGtc22B.1.36.10.002281
ORF7a87F87FttCttT22B.1.36.350.005208
ORF7a87F87FttCttT22B.1.36.380.003284
ORF7a87F87FttCttT22B.1.3690.00057
ORF7a87F87LttCttG22B.1.3690.00057
ORF7a87F87delTTC---22B.1.4270.000101
ORF7a87F87delTTC---22B.1.4290.000047
ORF7a87F87LttCttG22B.1.5740.004301
ORF7a87F87delTTC---22B.1.5950.000522
ORF7a87F87VTtcGtc22B.1.5960.000174
ORF7a87F87StTctCc22B.1.5960.000174
ORF7a87F87FttCttT22C.360.001821
ORF7a87F87LttCttA22P.1.140.000096
ORF7a87F87FttCttT22P.1.150.000465
ORF7a87F87ITtcAtc22P.1.170.000324
ORF7a87F87FttCttT22Q.80.00033
ORF7a87F87VTtcGtc110.055556
ORF7a87F87LttCttA11A0.000387
ORF7a87F87delTTC---11A.10.000282
ORF7a87F87delTTC---11A.2.20.001689
ORF7a87F87FttCttT11A.2.20.001689
ORF7a87F87LTtcCtc11A.280.002646
ORF7a87F87StTctCc11AL.10.012987
ORF7a87F87TTTcACc11All0
ORF7a87F87XtTCtAA11All0
ORF7a87F87YtTctAc11AU.30.00211
ORF7a87F87VTtcGtc11AY.1000.000046
ORF7a87F87delTTC---11AY.1010.00049
ORF7a87F87LttCttG11AY.1030.000006
ORF7a87F87del2TTc--c11AY.1030.000006
ORF7a87F87del1Ttc-tc11AY.1030.000006
ORF7a87F87StTctCc11AY.1040.001984
ORF7a87F87VTtcGtc11AY.1060.000335
ORF7a87F87CtTctGc11AY.1100.000113
ORF7a87F87LTtcCtc11AY.1110.000183
ORF7a87F87delTTC---11AY.1130.000142
ORF7a87F87LTtcCtc11AY.1130.000142
ORF7a87F87delTTC---11AY.1160.000287
ORF7a87F87delTTC---11AY.116.10.000311
ORF7a87F87VTtcGtc11AY.1170.000085
ORF7a87F87VTtcGtc11AY.1190.000035
ORF7a87F87VTtcGtc11AY.120.000316
ORF7a87F87FttCttT11AY.120.000316
ORF7a87F87del2TTc--c11AY.1200.000037
ORF7a87F87StTctCc11AY.1200.000037
ORF7a87F87delTTC---11AY.120.10.000321
ORF7a87F87delTTC---11AY.130.000161
ORF7a87F87delTTC---11AY.140.000088
ORF7a87F87delTTC---11AY.190.00114
ORF7a87F87del2TTc--c11AY.200.000039
ORF7a87F87LTtcCtc11AY.200.000039
ORF7a87F87GTTcGGc11AY.230.00007
ORF7a87F87LTtcCtc11AY.240.000431
ORF7a87F87delTTC---11AY.270.000065
ORF7a87F87ITtcAtc11AY.270.000065
ORF7a87F87del2TTc--c11AY.29.10.000221
ORF7a87F87CtTctGc11AY.30.00001
ORF7a87F87FttCttT11AY.300.000396
ORF7a87F87delTTC---11AY.300.000396
ORF7a87F87FttCttT11AY.34.10.00051
ORF7a87F87del1Ttc-tc11AY.390.000025
ORF7a87F87VTtcGtc11AY.390.000025
ORF7a87F87LttCttA11AY.39.10.00004
ORF7a87F87delTTC---11AY.39.10.00004
ORF7a87F87ITtcAtc11AY.39.20.001541
ORF7a87F87VTtcGtc11AY.40.000002
ORF7a87F87FttCttT11AY.4.10.000737
ORF7a87F87LTtcCtc11AY.4.20.000022
ORF7a87F87CtTctGc11AY.420.00004
ORF7a87F87del2TTc--c11AY.430.000004
ORF7a87F87VTtcGtc11AY.430.000004
ORF7a87F87del2TTc--c11AY.440.000006
ORF7a87F87StTctCc11AY.440.000006
ORF7a87F87VTtcGtc11AY.440.000006
ORF7a87F87FttCttT11AY.46.10.001027
ORF7a87F87FttCttT11AY.46.20.000635
ORF7a87F87FttCttT11AY.46.40.000165
ORF7a87F87FttCttT11AY.46.50.000198
ORF7a87F87FttCttT11AY.5.40.000277
ORF7a87F87FttCttT11AY.510.000909
ORF7a87F87LttCttA11AY.520.000814
ORF7a87F87StTctCc11AY.520.000814
ORF7a87F87delTTC---11AY.530.000288
ORF7a87F87delTTC---11AY.540.000095
ORF7a87F87FttCttT11AY.560.001605
ORF7a87F87FttCttT11AY.570.000656
ORF7a87F87FttCttT11AY.580.000907
ORF7a87F87LTtcCtc11AY.590.00053
ORF7a87F87StTctCc11AY.60.000041
ORF7a87F87delTTC---11AY.610.000105
ORF7a87F87FttCttT11AY.660.00107
ORF7a87F87delTTC---11AY.680.000274
ORF7a87F87delTTC---11AY.690.000187
ORF7a87F87FttCttT11AY.70.000196
ORF7a87F87VTtcGtc11AY.7.10.000113
ORF7a87F87delTTC---11AY.7.10.000113
ORF7a87F87CtTctGc11AY.7.10.000113
ORF7a87F87delTTC---11AY.710.000475
ORF7a87F87FttCttT11AY.730.000665
ORF7a87F87delTTC---11AY.730.000665
ORF7a87F87FttCttT11AY.740.000116
ORF7a87F87delTTC---11AY.75.10.00018
ORF7a87F87FttCttT11AY.790.001211
ORF7a87F87FttCttT11AY.850.000427
ORF7a87F87VTtcGtc11AY.850.000427
ORF7a87F87delTTC---11AY.850.000427
ORF7a87F87LTtcCtc11AY.850.000427
ORF7a87F87TTTcACc11AY.850.000427
ORF7a87F87FttCttT11AY.860.00083
ORF7a87F87delTTC---11AY.90.000068
ORF7a87F87FttCttT11AY.900.000684
ORF7a87F87delTTC---11AY.910.00073
ORF7a87F87CtTctGc11AY.930.000273
ORF7a87F87FttCttT11AY.930.000273
ORF7a87F87FttCttT11AY.960.002075
ORF7a87F87FttCttT11AY.970.001701
ORF7a87F87delTTC---11AY.980.000079
ORF7a87F87del2TTc--c11AY.98.10.000048
ORF7a87F87FttCttT11AY.99.10.001553
ORF7a87F87delTTC---11AY.99.20.000092
ORF7a87F87delTTC---11AZ.20.000821
ORF7a87F87LttCttA11B0.000128
ORF7a87F87StTctCc11B.1.10.000018
ORF7a87F87FttCttT11B.1.1.10.000327
ORF7a87F87FttCttT11B.1.1.100.001115
ORF7a87F87LttCttG11B.1.1.1160.0625
ORF7a87F87FttCttT11B.1.1.1630.007634
ORF7a87F87delTTC---11B.1.1.1700.001247
ORF7a87F87delTTC---11B.1.1.1740.003378
ORF7a87F87VTtcGtc11B.1.1.1890.001513
ORF7a87F87delTTC---11B.1.1.1920.002309
ORF7a87F87LTtcCtc11B.1.1.2140.000055
ORF7a87F87delTTC---11B.1.1.2220.000204
ORF7a87F87delTTC---11B.1.1.2580.003257
ORF7a87F87VTtcGtc11B.1.1.2820.011628
ORF7a87F87FttCttT11B.1.1.2970.002237
ORF7a87F87FttCttT11B.1.1.3030.002762
ORF7a87F87VTtcGtc11B.1.1.3050.003861
ORF7a87F87LttCttG11B.1.1.3060.000438
ORF7a87F87VTtcGtc11B.1.1.3060.000438
ORF7a87F87ITtcAtc11B.1.1.3180.000302
ORF7a87F87delTTC---11B.1.1.3180.000302
ORF7a87F87delTTC---11B.1.1.330.000421
ORF7a87F87FttCttT11B.1.1.3360.016667
ORF7a87F87FttCttT11B.1.1.3430.020833
ORF7a87F87FttCttT11B.1.1.3540.004386
ORF7a87F87delTTC---11B.1.1.3660.015873
ORF7a87F87VTtcGtc11B.1.1.3770.001381
ORF7a87F87FttCttT11B.1.1.3890.006061
ORF7a87F87FttCttT11B.1.1.3910.008547
ORF7a87F87VTtcGtc11B.1.1.3980.003226
ORF7a87F87FttCttT11B.1.1.4090.002833
ORF7a87F87YtTCtAT11B.1.1.4110.014706
ORF7a87F87delTTC---11B.1.1.4480.002033
ORF7a87F87LTtcCtc11B.1.1.4610.012048
ORF7a87F87LTtCCtA11B.1.1.4860.001577
ORF7a87F87FttCttT11B.1.1.4860.001577
ORF7a87F87FttCttT11B.1.1.5180.006329
ORF7a87F87LTtcCtc11B.1.1.5190.00004
ORF7a87F87FttCttT11B.1.1.5250.005464
ORF7a87F87YtTctAc11B.1.1.70.000001
ORF7a87F87XtTCtAA11B.1.1.70.000001
ORF7a87F87KTTCAAA11B.1.1.70.000001
ORF7a87F87delTTC---11B.1.1.700.000341
ORF7a87F87ITtcAtc11B.1.1.890.006061
ORF7a87F87FttCttT11B.1.1050.009615
ORF7a87F87FttCttT11B.1.1110.001175
ORF7a87F87delTTC---11B.1.1150.021739
ORF7a87F87LttCttA11B.1.1280.000635
ORF7a87F87YtTctAc11B.1.1600.000031
ORF7a87F87StTctCc11B.1.1600.000031
ORF7a87F87LttCttA11B.1.160.240.004425
ORF7a87F87CtTctGc11B.1.1770.000013
ORF7a87F87VTtcGtc11B.1.1770.000013
ORF7a87F87ITtcAtc11B.1.1770.000013
ORF7a87F87NTTcAAc11B.1.1770.000013
ORF7a87F87delTTC---11B.1.177.100.000878
ORF7a87F87FttCttT11B.1.177.190.001431
ORF7a87F87LttCttG11B.1.177.210.000076
ORF7a87F87YtTctAc11B.1.177.430.001477
ORF7a87F87delTTC---11B.1.177.500.004695
ORF7a87F87delTTC---11B.1.177.570.000281
ORF7a87F87FttCttT11B.1.177.600.000218
ORF7a87F87delTTC---11B.1.177.620.001192
ORF7a87F87FttCttT11B.1.177.620.001192
ORF7a87F87YtTCtAT11B.1.177.630.002703
ORF7a87F87ITtcAtc11B.1.177.770.000726
ORF7a87F87delTTC---11B.1.177.810.000189
ORF7a87F87LttCttG11B.1.1880.016667
ORF7a87F87LttCttG11B.1.2060.000816
ORF7a87F87delTTC---11B.1.2210.000071
ORF7a87F87FttCttT11B.1.221.30.000833
ORF7a87F87FttCttT11B.1.2390.001221
ORF7a87F87delTTC---11B.1.2400.000216
ORF7a87F87VTtcGtc11B.1.2420.018868
ORF7a87F87delTTC---11B.1.2430.00007
ORF7a87F87StTctCc11B.1.2430.00007
ORF7a87F87del2TTC--N11B.1.2430.00007
ORF7a87F87delTTC---11B.1.2580.000067
ORF7a87F87LTtcCtc11B.1.2580.000067
ORF7a87F87delTTC---11B.1.258.170.000104
ORF7a87F87delTTC---11B.1.2650.001271
ORF7a87F87FttCttT11B.1.2980.002114
ORF7a87F87StTctCc11B.1.3010.005917
ORF7a87F87LttCttA11B.1.3010.005917
ORF7a87F87YtTctAc11B.1.3110.000275
ORF7a87F87LttCttG11B.1.3130.006579
ORF7a87F87delTTC---11B.1.3190.003049
ORF7a87F87LttCttG11B.1.3200.001245
ORF7a87F87FttCttT11B.1.3200.001245
ORF7a87F87LttCttG11B.1.3240.001605
ORF7a87F87LttCttG11B.1.3360.002439
ORF7a87F87LttCttG11B.1.3370.005587
ORF7a87F87LttCttG11B.1.3400.004292
ORF7a87F87ITtcAtc11B.1.3510.00003
ORF7a87F87ITtcAtc11B.1.351.20.000303
ORF7a87F87VTtcGtc11B.1.360.000146
ORF7a87F87FttCttT11B.1.36.220.001208
ORF7a87F87StTctCc11B.1.36.270.000763
ORF7a87F87LttCttG11B.1.3670.000792
ORF7a87F87FttCttT11B.1.3670.000792
ORF7a87F87delTTC---11B.1.3710.001122
ORF7a87F87delTTC---11B.1.3750.00082
ORF7a87F87LTtcCtc11B.1.4090.000781
ORF7a87F87FttCttT11B.1.4160.001269
ORF7a87F87LttCttG11B.1.4260.001009
ORF7a87F87VTtcGtc11B.1.4290.000024
ORF7a87F87ITtcAtc11B.1.4290.000024
ORF7a87F87del2TTC--N11B.1.4290.000024
ORF7a87F87VTtcGtc11B.1.4380.006536
ORF7a87F87FttCttT11B.1.4520.013699
ORF7a87F87FttCttT11B.1.4530.003236
ORF7a87F87delTTC---11B.1.4590.004082
ORF7a87F87StTctCc11B.1.4600.017857
ORF7a87F87FttCttT11B.1.466.20.000391
ORF7a87F87delTTC---11B.1.4680.005714
ORF7a87F87FttCttT11B.1.4680.005714
ORF7a87F87delTTC---11B.1.4700.001404
ORF7a87F87FttCttT11B.1.4740.001901
ORF7a87F87ITtcAtc11B.1.4970.000315
ORF7a87F87StTctCc11B.1.4970.000315
ORF7a87F87GTTcGGc11B.1.4970.000315
ORF7a87F87LTtcCtc11B.1.5260.000024
ORF7a87F87FttCttT11B.1.5270.003704
ORF7a87F87delTTC---11B.1.5270.003704
ORF7a87F87FttCttT11B.1.5410.004425
ORF7a87F87ITtcAtc11B.1.5490.007194
ORF7a87F87LttCttG11B.1.5650.00081
ORF7a87F87FttCttT11B.1.5740.002151
ORF7a87F87delTTC---11B.1.5770.000687
ORF7a87F87delTTC---11B.1.5820.000491
ORF7a87F87LttCttG11B.1.5940.03125
ORF7a87F87LTtcCtc11B.1.5960.000087
ORF7a87F87LTtcCtc11B.1.5990.00365
ORF7a87F87FttCttT11B.1.6120.002653
ORF7a87F87delTTC---11B.1.617.10.000129
ORF7a87F87HTTcCAc11B.1.617.20.000004
ORF7a87F87del2TTc--c11B.1.617.20.000004
ORF7a87F87ITtcAtc11B.1.617.20.000004
ORF7a87F87LttCttA11B.1.619.10.000641
ORF7a87F87delTTC---11B.1.6200.000946
ORF7a87F87delTTC---11B.1.621.10.000506
ORF7a87F87LttCttA11B.1.6230.000536
ORF7a87F87FttCttT11B.1.6340.003425
ORF7a87F87FttCttT11B.1.6350.017544
ORF7a87F87LttCttG11B.1.6360.006711
ORF7a87F87del1Ttc-tc11B.1.6370.000073
ORF7a87F87delTTC---11B.1.6380.052632
ORF7a87F87delTTC---11B.1.9.10.032258
ORF7a87F87FttCttT11B.1.930.000934
ORF7a87F87delTTC---11B.1.930.000934
ORF7a87F87FttCttT11B.200.023256
ORF7a87F87FttCttT11B.270.015385
ORF7a87F87FttCttT11B.6.60.000889
ORF7a87F87LTtcCtc11C.350.000774
ORF7a87F87delTTC---11C.36.30.000567
ORF7a87F87FttCttT11C.370.000116
ORF7a87F87ITtcAtc11D.20.000075
ORF7a87F87FttCttT11N.50.001767
ORF7a87F87del2TTc--c11P.10.000016
ORF7a87F87delTTC---11P.1.10.000318
ORF7a87F87FttCttT11P.1.10.10.00813
ORF7a87F87delTTC---11P.1.120.000484
ORF7a87F87FttCttT11P.1.130.000898
ORF7a87F87delTTC---11P.1.130.000898
ORF7a87F87delTTC---11P.1.140.000048
ORF7a87F87del1TTC-NN11P.1.150.000232
ORF7a87F87delTTC---11P.1.160.000374
ORF7a87F87delTTC---11P.1.30.034483
ORF7a87F87delTTC---11P.1.40.000977
ORF7a87F87FttCttT11P.1.70.000319
ORF7a87F87FttCttT11P.20.000187
ORF7a87F87FttCttT11Q.10.000126
ORF7a87F87VTtcGtc11Q.10.000126
ORF7a87F87LttCttG11Q.30.000145
ORF7a87F87delTTC---11Q.70.001111
ORF7a87F87FttCttT11R.10.00009