CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 83 & Codon = Gca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a83S83AnonsynTcaGca2272250.99118927640-27642

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a83S83ATcaGca225227All0.000043
ORF7a83S83ATcaGca6767AY.40.000104
ORF7a83S83ATcaGca4141AY.480.01907
ORF7a83S83ATcaGca2121B.1.1.70.000019
ORF7a83S83ATcaGca1617AY.1030.000099
ORF7a83S83ATcaGca1111AY.390.000272
ORF7a83S83ATcaGca1010AY.430.000044
ORF7a83S83ATcaGca99AY.1000.000414
ORF7a83S83ATcaGca55AY.440.00003
ORF7a83S83ATcaGca44B.1.5820.001963
ORF7a83S83ATcaGca33AY.330.0002
ORF7a83S83ATcaGca33B.1.177.160.001993
ORF7a83S83ATcaGca33B.1.36.240.018519
ORF7a83S83ATcaGca22AY.39.10.000079
ORF7a83S83ATcaGca22AY.4.40.000818
ORF7a83S83ATcaGca22AY.420.00008
ORF7a83S83ATcaGca22AY.850.000854
ORF7a83S83ATcaGca22B.1.177.120.000303
ORF7a83S83ATcaGca22B.1.617.20.000008
ORF7a83S83ATcaGca11AY.1130.000142
ORF7a83S83ATcaGca11AY.1200.000037
ORF7a83S83ATcaGca11AY.200.000039
ORF7a83S83ATcaGca11AY.260.000028
ORF7a83S83ATcaGca11AY.290.000016
ORF7a83S83ATcaGca11AY.30.00001
ORF7a83S83ATcaGca11AY.300.000396
ORF7a83S83ATcaGca11AY.4.50.000107
ORF7a83S83ATcaGca11AY.460.000104
ORF7a83S83ATcaGca11AY.610.000105
ORF7a83S83ATcaGca11AY.650.000533
ORF7a83S83ATcaGca11AY.9.10.000084
ORF7a83S83ATcaGca11AY.99.20.000092
ORF7a83S83ATcaGca11B.1.1.100.001115
ORF7a83S83ATcaGca11B.1.1.2140.000055
ORF7a83S83ATcaGca11B.1.1.4320.001266
ORF7a83S83ATcaGca11B.1.1770.000013
ORF7a83S83ATcaGca11B.1.177.810.000189
ORF7a83S83ATcaGca11B.1.4290.000024
ORF7a83S83ATcaGca11B.1.4970.000315