CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 79 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a79A79AsyngcCgcT797268490.85913227628-27630

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a79A79AgcCgcT68497972All0.00131
ORF7a79A79AgcCgcT17101877B.1.1.70.001531
ORF7a79A79AgcCgcT720781AY.40.001121
ORF7a79A79AgcCgcT562562B.1.1.4860.886435
ORF7a79A79AgcCgcT226441B.1.5260.005312
ORF7a79A79AgcCgcT194366B.1.20.001708
ORF7a79A79AgcCgcT347348B.1.1.2140.019244
ORF7a79A79AgcCgcT261307B.1.617.20.000983
ORF7a79A79AgcCgcT239263B.1.4290.005623
ORF7a79A79AgcCgcT198203AY.430.000877
ORF7a79A79AgcCgcT123179AY.1030.000764
ORF7a79A79AgcCgcT123128AY.30.001223
ORF7a79A79AgcCgcT111114AY.470.003453
ORF7a79A79AgcCgcT101108B.10.000925
ORF7a79A79AgcCgcT98101B.1.2430.006819
ORF7a79A79AgcCgcT7991B.1.10.001433
ORF7a79A79AgcCgcT7590P.10.001182
ORF7a79A79AgcCgcT7285AY.390.001779
ORF7a79A79AgcCgcT8282A.2.50.040918
ORF7a79A79AgcCgcT1066P.1.140.000478
ORF7a79A79AgcCgcT4265AY.250.000253
ORF7a79A79AgcCgcT6565P.20.012131
ORF7a79A79AgcCgcT1061AY.440.000061
ORF7a79A79AgcCgcT5658AY.1020.001485
ORF7a79A79AgcCgcT1351AY.1000.000598
ORF7a79A79AgcCgcT4650B.1.3510.001367
ORF7a79A79AgcCgcT3840B.1.1770.0005
ORF7a79A79AgcCgcT3636B.1.5580.164384
ORF7a79A79AgcCgcT3535B.1.3710.039282
ORF7a79A79AgcCgcT2233AY.260.000623
ORF7a79A79AgcCgcT2832B.1.1600.000873
ORF7a79A79AgcCgcT3030B.1.6090.014382
ORF7a79A79AgcCgcT2227AY.4.20.000477
ORF7a79A79AgcCgcT2727B.1.1.4340.009411
ORF7a79A79AgcCgcT2124AY.1180.001316
ORF7a79A79AgcCgcT2224B.1.5950.005741
ORF7a79A79AgcCgcT2323B.1.1.2750.258427
ORF7a79A79AgcCgcT2323B.1.6370.001681
ORF7a79A79AgcCgcT2222P.1.150.005112
ORF7a79A79AgcCgcT1821AY.680.004927
ORF7a79A79AgcCgcT1721B.1.1.5190.000675
ORF7a79A79AgcCgcT2020AY.750.00112
ORF7a79A79AgcCgcT1919B.1.177.750.019771
ORF7a79A79AgcCgcT1919B.1.2410.015422
ORF7a79A79AgcCgcT1919B.1.4270.000959
ORF7a79A79AgcCgcT1517AY.200.000583
ORF7a79A79AgcCgcT1717AY.670.007892
ORF7a79A79AgcCgcT1717B.1.1.1410.034205
ORF7a79A79AgcCgcT1217B.1.2580.000799
ORF7a79A79AgcCgcT1316B.1.360.001897
ORF7a79A79AgcCgcT1616B.1.3690.004564
ORF7a79A79AgcCgcT1415AY.1190.000494
ORF7a79A79AgcCgcT1314AY.290.000205
ORF7a79A79AgcCgcT1414B.1.1.1920.032333
ORF7a79A79AgcCgcT1014B.1.1.330.004209
ORF7a79A79AgcCgcT1213AY.50.000248
ORF7a79A79AgcCgcT612AY.1200.000223
ORF7a79A79AgcCgcT1212AY.4.2.10.001788
ORF7a79A79AgcCgcT812AY.420.000322
ORF7a79A79AgcCgcT1212B.1.1.390.006116
ORF7a79A79AgcCgcT1212B.1.1.700.004093
ORF7a79A79AgcCgcT1111B.1.5410.048673
ORF7a79A79AgcCgcT510AY.330.000334
ORF7a79A79AgcCgcT810AY.540.000763
ORF7a79A79AgcCgcT1010AY.980.00079
ORF7a79A79AgcCgcT1010B.1.1.3480.007962
ORF7a79A79AgcCgcT710C.370.000812
ORF7a79A79AgcCgcT89AY.4.50.00086
ORF7a79A79AgcCgcT89AY.46.60.000578
ORF7a79A79AgcCgcT99AY.690.00168
ORF7a79A79AgcCgcT79AY.9.20.000257
ORF7a79A79AgcCgcT99B.1.1.4020.1
ORF7a79A79AgcCgcT99B.1.1.500.00611
ORF7a79A79AgcCgcT99B.1.2390.010989
ORF7a79A79AgcCgcT99B.1.5510.011613
ORF7a79A79AgcCgcT89B.1.5960.000697
ORF7a79A79AgcCgcT78AY.3.10.000597
ORF7a79A79AgcCgcT88AY.340.000776
ORF7a79A79AgcCgcT88AY.610.000838
ORF7a79A79AgcCgcT88B.1.1.3110.002865
ORF7a79A79AgcCgcT88B.1.3960.005646
ORF7a79A79AgcCgcT88B.1.5610.003176
ORF7a79A79AgcCgcT48B.1.6210.000354
ORF7a79A79AgcCgcT77AY.1210.000947
ORF7a79A79AgcCgcT77AY.140.000616
ORF7a79A79AgcCgcT77AY.460.000729
ORF7a79A79AgcCgcT77AY.5.30.002362
ORF7a79A79AgcCgcT77B.1.1.2220.001428
ORF7a79A79AgcCgcT77B.1.1.2240.1
ORF7a79A79AgcCgcT77B.1.1.2840.000752
ORF7a79A79AgcCgcT67B.1.177.820.002864
ORF7a79A79AgcCgcT66AY.230.000418
ORF7a79A79AgcCgcT66AY.39.10.000238
ORF7a79A79AgcCgcT56B.1.1.280.001556
ORF7a79A79AgcCgcT66B.1.4990.006303
ORF7a79A79AgcCgcT66B.1.5620.111111
ORF7a79A79AgcCgcT66C.360.005464
ORF7a79A79AgcCgcT56P.1.70.001596
ORF7a79A79AgcCgcT55B.1.1.250.002843
ORF7a79A79AgcCgcT55B.1.1.2940.006329
ORF7a79A79AgcCgcT55B.1.1.3160.004625
ORF7a79A79AgcCgcT55B.1.1.380.294118
ORF7a79A79AgcCgcT55B.1.177.100.00439
ORF7a79A79AgcCgcT55B.1.177.120.000758
ORF7a79A79AgcCgcT45B.1.2210.000284
ORF7a79A79AgcCgcT55B.1.3460.006553
ORF7a79A79AgcCgcT35B.1.5250.000339
ORF7a79A79AgcCgcT55C.160.005302
ORF7a79A79AgcCgcT55C.36.30.002836
ORF7a79A79AgcCgcT55Q.40.002274
ORF7a79A79AgcCgcT34AY.1130.000427
ORF7a79A79AgcCgcT44AY.29.10.000882
ORF7a79A79AgcCgcT34AY.450.000365
ORF7a79A79AgcCgcT44AY.620.001743
ORF7a79A79AgcCgcT44AY.660.004278
ORF7a79A79AgcCgcT24AY.75.10.000361
ORF7a79A79AgcCgcT44AY.99.20.000369
ORF7a79A79AgcCgcT44B.1.1.4120.030534
ORF7a79A79AgcCgcT44B.1.1.580.021505
ORF7a79A79AgcCgcT44B.1.177.70.000659
ORF7a79A79AgcCgcT44B.1.177.730.002265
ORF7a79A79AgcCgcT44B.1.177.810.000757
ORF7a79A79AgcCgcT44B.1.177.860.000734
ORF7a79A79AgcCgcT44B.1.351.20.00121
ORF7a79A79AgcCgcT34B.1.351.30.002629
ORF7a79A79AgcCgcT44B.1.36.290.002069
ORF7a79A79AgcCgcT44B.1.617.10.000516
ORF7a79A79AgcCgcT44Q.20.002454
ORF7a79A79AgcCgcT44Q.30.00058
ORF7a79A79AgcCgcT33AY.1160.00086
ORF7a79A79AgcCgcT33AY.240.001293
ORF7a79A79AgcCgcT23AY.270.000129
ORF7a79A79AgcCgcT33AY.640.001786
ORF7a79A79AgcCgcT33AY.850.001282
ORF7a79A79AgcCgcT23AY.90.000135
ORF7a79A79AgcCgcT23AY.98.10.000097
ORF7a79A79AgcCgcT23B0.000256
ORF7a79A79AgcCgcT33B.1.1.1350.014085
ORF7a79A79AgcCgcT33B.1.1.4160.002715
ORF7a79A79AgcCgcT33B.1.160.300.008929
ORF7a79A79AgcCgcT23B.1.177.210.000153
ORF7a79A79AgcCgcT33B.1.177.600.000655
ORF7a79A79AgcCgcT33B.1.177.870.002183
ORF7a79A79AgcCgcT33B.1.36.180.001261
ORF7a79A79AgcCgcT33B.1.3670.002377
ORF7a79A79AgcCgcT33B.1.438.10.000322
ORF7a79A79AgcCgcT13B.1.5760.000907
ORF7a79A79AgcCgcT33B.1.5810.028302
ORF7a79A79AgcCgcT33C.350.002322
ORF7a79A79AgcCgcT33Q.60.019868
ORF7a79A79AgcCgcT33Q.80.000495
ORF7a79A79AgcCgcT23R.10.00018
ORF7a79A79AgcCgcT22A.23.10.001408
ORF7a79A79AgcCgcT22AD.20.000438
ORF7a79A79AgcCgcT22AY.100.00106
ORF7a79A79AgcCgcT22AY.1060.00067
ORF7a79A79AgcCgcT22AY.116.10.000623
ORF7a79A79AgcCgcT22AY.23.10.000835
ORF7a79A79AgcCgcT22AY.320.001065
ORF7a79A79AgcCgcT22AY.46.20.001271
ORF7a79A79AgcCgcT22AY.630.000774
ORF7a79A79AgcCgcT12AY.770.001127
ORF7a79A79AgcCgcT22AY.870.001665
ORF7a79A79AgcCgcT22B.1.1.100.00223
ORF7a79A79AgcCgcT22B.1.1.2530.005013
ORF7a79A79AgcCgcT22B.1.1.2690.002706
ORF7a79A79AgcCgcT22B.1.1.3060.000877
ORF7a79A79AgcCgcT22B.1.1.3890.012121
ORF7a79A79AgcCgcT22B.1.1.4070.083333
ORF7a79A79AgcCgcT22B.1.1.4640.002946
ORF7a79A79AgcCgcT22B.1.1.720.060606
ORF7a79A79AgcCgcT22B.1.177.230.006472
ORF7a79A79AgcCgcT22B.1.177.40.000422
ORF7a79A79AgcCgcT22B.1.177.550.004662
ORF7a79A79AgcCgcT22B.1.177.570.000562
ORF7a79A79AgcCgcT12B.1.2060.000816
ORF7a79A79AgcCgcT22B.1.258.110.000793
ORF7a79A79AgcCgcT22B.1.258.140.001961
ORF7a79A79AgcCgcT22B.1.258.170.000208
ORF7a79A79AgcCgcT22B.1.3200.002491
ORF7a79A79AgcCgcT22B.1.3360.004878
ORF7a79A79AgcCgcT22B.1.3490.00143
ORF7a79A79AgcCgcT22B.1.36.380.003284
ORF7a79A79AgcCgcT22B.1.416.10.003125
ORF7a79A79AgcCgcT22B.1.466.20.000782
ORF7a79A79AgcCgcT22B.1.5170.000854
ORF7a79A79AgcCgcT22B.1.5640.000852
ORF7a79A79AgcCgcT12D.20.000075
ORF7a79A79AgcCgcT22P.1.120.000968
ORF7a79A79AgcCgcT22P.1.170.000324
ORF7a79A79AgcCgcT22P.1.90.009615
ORF7a79A79AgcCgcT22Q.10.000253
ORF7a79A79AgcCgcT11A0.000387
ORF7a79A79AgcCgcT11A.190.009434
ORF7a79A79AgcCgcT11A.20.000662
ORF7a79A79AgcCgcT11A.280.002646
ORF7a79A79AgcCgcT11AP.10.001502
ORF7a79A79AgcCgcT11AY.1010.00049
ORF7a79A79AgcCgcT11AY.1040.001984
ORF7a79A79AgcCgcT11AY.1070.000466
ORF7a79A79AgcCgcT11AY.1090.00074
ORF7a79A79AgcCgcT11AY.1100.000113
ORF7a79A79AgcCgcT11AY.130.000161
ORF7a79A79AgcCgcT11AY.160.00038
ORF7a79A79AgcCgcT11AY.300.000396
ORF7a79A79AgcCgcT11AY.360.000148
ORF7a79A79AgcCgcT11AY.370.000316
ORF7a79A79AgcCgcT11AY.380.000499
ORF7a79A79AgcCgcT11AY.46.40.000165
ORF7a79A79AgcCgcT11AY.5.10.003759
ORF7a79A79AgcCgcT11AY.5.40.000277
ORF7a79A79AgcCgcT11AY.530.000288
ORF7a79A79AgcCgcT11AY.60.000041
ORF7a79A79AgcCgcT11AY.650.000533
ORF7a79A79AgcCgcT11AY.780.001541
ORF7a79A79AgcCgcT11AY.790.001211
ORF7a79A79AgcCgcT11AY.860.00083
ORF7a79A79AgcCgcT11AY.9.10.000084
ORF7a79A79AgcCgcT11AY.910.00073
ORF7a79A79AgcCgcT11AY.940.000443
ORF7a79A79AgcCgcT11AZ.10.000867
ORF7a79A79AgcCgcT11B.1.1.1530.001095
ORF7a79A79AgcCgcT11B.1.1.1960.005714
ORF7a79A79AgcCgcT11B.1.1.1980.001468
ORF7a79A79AgcCgcT11B.1.1.2160.00089
ORF7a79A79AgcCgcT11B.1.1.2190.005
ORF7a79A79AgcCgcT11B.1.1.2580.003257
ORF7a79A79AgcCgcT11B.1.1.2720.005208
ORF7a79A79AgcCgcT11B.1.1.3020.002075
ORF7a79A79AgcCgcT11B.1.1.3090.005848
ORF7a79A79AgcCgcT11B.1.1.3120.001912
ORF7a79A79AgcCgcT11B.1.1.3150.008475
ORF7a79A79AgcCgcT11B.1.1.3180.000302
ORF7a79A79AgcCgcT11B.1.1.3260.001761
ORF7a79A79AgcCgcT11B.1.1.3440.010753
ORF7a79A79AgcCgcT11B.1.1.3720.000689
ORF7a79A79AgcCgcT11B.1.1.4040.015873
ORF7a79A79AgcCgcT11B.1.1.5250.005464
ORF7a79A79AgcCgcT11B.1.1.540.003021
ORF7a79A79AgcCgcT11B.1.1.630.000386
ORF7a79A79AgcCgcT11B.1.177.200.001517
ORF7a79A79AgcCgcT11B.1.177.50.001242
ORF7a79A79AgcCgcT11B.1.177.620.001192
ORF7a79A79AgcCgcT11B.1.177.770.000726
ORF7a79A79AgcCgcT11B.1.221.20.004016
ORF7a79A79AgcCgcT11B.1.230.006061
ORF7a79A79AgcCgcT11B.1.2360.002053
ORF7a79A79AgcCgcT11B.1.30.002618
ORF7a79A79AgcCgcT11B.1.3110.000275
ORF7a79A79AgcCgcT11B.1.3330.010526
ORF7a79A79AgcCgcT11B.1.36.160.001425
ORF7a79A79AgcCgcT11B.1.36.240.006173
ORF7a79A79AgcCgcT11B.1.3620.001541
ORF7a79A79AgcCgcT11B.1.3800.006623
ORF7a79A79AgcCgcT11B.1.3950.007042
ORF7a79A79AgcCgcT11B.1.4000.000429
ORF7a79A79AgcCgcT11B.1.4090.000781
ORF7a79A79AgcCgcT11B.1.4220.000812
ORF7a79A79AgcCgcT11B.1.4460.02
ORF7a79A79AgcCgcT11B.1.4560.003268
ORF7a79A79AgcCgcT11B.1.4980.020408
ORF7a79A79AgcCgcT11B.1.5090.000866
ORF7a79A79AgcCgcT11B.1.5240.001406
ORF7a79A79AgcCgcT11B.1.5400.009709
ORF7a79A79AgcCgcT11B.1.5600.00463
ORF7a79A79AgcCgcT11B.1.5800.004065
ORF7a79A79AgcCgcT11B.1.5850.027778
ORF7a79A79AgcCgcT11B.1.5880.00091
ORF7a79A79AgcCgcT11B.1.5980.016949
ORF7a79A79AgcCgcT11B.1.930.000934
ORF7a79A79AgcCgcT11B.400.000364
ORF7a79A79AgcCgcT11B.60.00091
ORF7a79A79AgcCgcT11C.10.002392
ORF7a79A79AgcCgcT11C.1.20.004255
ORF7a79A79AgcCgcT11U.30.003861