CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 79 & Codon = Tcc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a79A79SnonsynGccTcc139113900.99928127628-27630

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a79A79SGccTcc13901391All0.000266
ORF7a79A79SGccTcc731731B.1.617.20.002753
ORF7a79A79SGccTcc151151AY.430.000669
ORF7a79A79SGccTcc7172B.1.1.70.000064
ORF7a79A79SGccTcc6767AY.1020.001776
ORF7a79A79SGccTcc5959AY.40.000092
ORF7a79A79SGccTcc4747AY.1200.001747
ORF7a79A79SGccTcc3333AY.460.003435
ORF7a79A79SGccTcc2626AY.390.000642
ORF7a79A79SGccTcc1818B.1.1770.000237
ORF7a79A79SGccTcc1010AY.200.000389
ORF7a79A79SGccTcc1010AY.370.003161
ORF7a79A79SGccTcc1010AY.470.000311
ORF7a79A79SGccTcc99AY.1170.000761
ORF7a79A79SGccTcc99AY.440.000055
ORF7a79A79SGccTcc99B.10.000082
ORF7a79A79SGccTcc88AY.1030.00005
ORF7a79A79SGccTcc77B.1.20.000062
ORF7a79A79SGccTcc66AY.450.00073
ORF7a79A79SGccTcc66B.1.3510.000178
ORF7a79A79SGccTcc55AY.1130.000712
ORF7a79A79SGccTcc55AY.1180.000313
ORF7a79A79SGccTcc55AY.99.20.000461
ORF7a79A79SGccTcc44AY.50.000083
ORF7a79A79SGccTcc44B.1.5260.000094
ORF7a79A79SGccTcc33AY.30.00003
ORF7a79A79SGccTcc33AY.320.001597
ORF7a79A79SGccTcc33AY.540.000286
ORF7a79A79SGccTcc33AY.60.000123
ORF7a79A79SGccTcc22AY.1000.000092
ORF7a79A79SGccTcc22AY.330.000134
ORF7a79A79SGccTcc22AY.4.20.000043
ORF7a79A79SGccTcc22AY.46.40.000329
ORF7a79A79SGccTcc22AY.860.00166
ORF7a79A79SGccTcc22B.1.1.390.001019
ORF7a79A79SGccTcc22B.1.177.770.001452
ORF7a79A79SGccTcc22B.1.2430.000139
ORF7a79A79SGccTcc22B.1.4290.000047
ORF7a79A79SGccTcc11A.10.000282
ORF7a79A79SGccTcc11A.2.50.000499
ORF7a79A79SGccTcc11AY.100.00053
ORF7a79A79SGccTcc11AY.1060.000335
ORF7a79A79SGccTcc11AY.1080.001103
ORF7a79A79SGccTcc11AY.110.001339
ORF7a79A79SGccTcc11AY.1110.000183
ORF7a79A79SGccTcc11AY.1140.000231
ORF7a79A79SGccTcc11AY.1160.000287
ORF7a79A79SGccTcc11AY.120.10.000321
ORF7a79A79SGccTcc11AY.220.002092
ORF7a79A79SGccTcc11AY.250.000006
ORF7a79A79SGccTcc11AY.260.000028
ORF7a79A79SGccTcc11AY.270.000065
ORF7a79A79SGccTcc11AY.290.000016
ORF7a79A79SGccTcc11AY.410.000294
ORF7a79A79SGccTcc11AY.420.00004
ORF7a79A79SGccTcc11AY.46.20.000635
ORF7a79A79SGccTcc11AY.46.30.000934
ORF7a79A79SGccTcc11AY.480.000465
ORF7a79A79SGccTcc11AY.580.000907
ORF7a79A79SGccTcc11AY.630.000387
ORF7a79A79SGccTcc11AY.680.000274
ORF7a79A79SGccTcc11AY.710.000475
ORF7a79A79SGccTcc11AY.820.001357
ORF7a79A79SGccTcc11AY.840.000437
ORF7a79A79SGccTcc11AY.870.000833
ORF7a79A79SGccTcc11AY.880.000884
ORF7a79A79SGccTcc11AY.9.10.000084
ORF7a79A79SGccTcc11AY.9.20.000037
ORF7a79A79SGccTcc11B.1.1.270.00565
ORF7a79A79SGccTcc11B.1.1.2840.000107
ORF7a79A79SGccTcc11B.1.1.370.000193
ORF7a79A79SGccTcc11B.1.1.3750.011905
ORF7a79A79SGccTcc11B.1.1.3980.003226
ORF7a79A79SGccTcc11B.1.1.4320.001266
ORF7a79A79SGccTcc11B.1.1.5190.00004
ORF7a79A79SGccTcc11B.1.1600.000031
ORF7a79A79SGccTcc11B.1.177.40.000211
ORF7a79A79SGccTcc11B.1.177.860.000183
ORF7a79A79SGccTcc11B.1.3050.002151
ORF7a79A79SGccTcc11B.1.4970.000315
ORF7a79A79SGccTcc11B.1.5090.000866
ORF7a79A79SGccTcc11B.1.5960.000087
ORF7a79A79SGccTcc11B.1.6280.000352
ORF7a79A79SGccTcc11B.1.6300.005236
ORF7a79A79SGccTcc11C.360.000911
ORF7a79A79SGccTcc11P.1.120.000484
ORF7a79A79SGccTcc11P.1.40.000977
ORF7a79A79SGccTcc11R.10.00009