CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF7a | 79 | A79D | nonsyn | gCc | gAc | 15261 | 15244 | 0.998886 | 27628-27630 | |
ORF7a | 79 | A79D | nonsyn | gCC | gAT | 15261 | 17 | 0.00111395 | 27628-27630 | |
ORF7a | 79 | A79A | syn | gcC | gcT | 7972 | 6849 | 0.859132 | 27628-27630 | |
ORF7a | 79 | A79A | syn | gcC | gcA | 7972 | 1062 | 0.133216 | 27628-27630 | |
ORF7a | 79 | A79A | syn | gcC | gcG | 7972 | 61 | 0.00765178 | 27628-27630 | |
ORF7a | 79 | A79del | del | GCC | --- | 7865 | 7865 | 1 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | Gcc | -cc | 1716 | 1679 | 0.978438 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | gcC | gc- | 1716 | 17 | 0.00990676 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | gCc | g-c | 1716 | 6 | 0.0034965 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | GCc | -Nc | 1716 | 4 | 0.002331 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | GCc | -Ac | 1716 | 3 | 0.00174825 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | gCC | g-N | 1716 | 2 | 0.0011655 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | GCC | -NN | 1716 | 2 | 0.0011655 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | GCc | -Tc | 1716 | 2 | 0.0011655 | 27628-27630 | |
ORF7a | 79 | A79del1 | del | GcC | -cN | 1716 | 1 | 0.000582751 | 27628-27630 | |
ORF7a | 79 | A79S | nonsyn | Gcc | Tcc | 1391 | 1390 | 0.999281 | 27628-27630 | |
ORF7a | 79 | A79S | nonsyn | GcC | TcA | 1391 | 1 | 0.000718907 | 27628-27630 | |
ORF7a | 79 | A79V | nonsyn | gCc | gTc | 1012 | 988 | 0.976285 | 27628-27630 | |
ORF7a | 79 | A79V | nonsyn | gCC | gTT | 1012 | 23 | 0.0227273 | 27628-27630 | |
ORF7a | 79 | A79V | nonsyn | gCC | gTA | 1012 | 1 | 0.000988142 | 27628-27630 | |
ORF7a | 79 | A79T | nonsyn | Gcc | Acc | 187 | 186 | 0.994652 | 27628-27630 | |
ORF7a | 79 | A79T | nonsyn | GcC | AcG | 187 | 1 | 0.00534759 | 27628-27630 | |
ORF7a | 79 | A79del2 | del | GCc | --c | 148 | 92 | 0.621622 | 27628-27630 | |
ORF7a | 79 | A79del2 | del | gCC | g-- | 148 | 55 | 0.371622 | 27628-27630 | |
ORF7a | 79 | A79del2 | del | GCC | --N | 148 | 1 | 0.00675676 | 27628-27630 | |
ORF7a | 79 | A79P | nonsyn | Gcc | Ccc | 88 | 87 | 0.988636 | 27628-27630 | |
ORF7a | 79 | A79P | nonsyn | GcC | CcA | 88 | 1 | 0.0113636 | 27628-27630 | |
ORF7a | 79 | A79G | nonsyn | gCc | gGc | 36 | 24 | 0.666667 | 27628-27630 | |
ORF7a | 79 | A79G | nonsyn | gCC | gGA | 36 | 12 | 0.333333 | 27628-27630 | |
ORF7a | 79 | A79Y | nonsyn | GCc | TAc | 5 | 4 | 0.8 | 27628-27630 | |
ORF7a | 79 | A79Y | nonsyn | GCC | TAT | 5 | 1 | 0.2 | 27628-27630 | |
ORF7a | 79 | A79N | nonsyn | GCC | AAT | 3 | 2 | 0.666667 | 27628-27630 | |
ORF7a | 79 | A79I | nonsyn | GCC | ATT | 3 | 2 | 0.666667 | 27628-27630 | |
ORF7a | 79 | A79I | nonsyn | GCC | ATA | 3 | 1 | 0.333333 | 27628-27630 | |
ORF7a | 79 | A79N | nonsyn | GCc | AAc | 3 | 1 | 0.333333 | 27628-27630 | |
ORF7a | 79 | A79C | nonsyn | GCc | TGc | 2 | 2 | 1 | 27628-27630 | |
ORF7a | 79 | A79F | nonsyn | GCc | TTc | 2 | 2 | 1 | 27628-27630 | |
ORF7a | 79 | A79E | nonsyn | gCC | gAG | 2 | 1 | 0.5 | 27628-27630 | |
ORF7a | 79 | A79E | nonsyn | gCC | gAA | 2 | 1 | 0.5 | 27628-27630 | |
ORF7a | 79 | A79W | nonsyn | GCC | TGG | 1 | 1 | 1 | 27628-27630 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF7a | 79 | A79D | gCc | gAc | 15244 | 15261 | All | 0.002916 |
ORF7a | 79 | A79D | gCC | gAT | 17 | 15261 | All | 0.000003 |
ORF7a | 79 | A79D | gCc | gAc | 8174 | 8184 | AY.7.1 | 0.921222 |
ORF7a | 79 | A79D | gCC | gAT | 10 | 8184 | AY.7.1 | 0.001127 |
ORF7a | 79 | A79A | gcC | gcT | 6849 | 7972 | All | 0.00131 |
ORF7a | 79 | A79A | gcC | gcA | 1062 | 7972 | All | 0.000203 |
ORF7a | 79 | A79A | gcC | gcG | 61 | 7972 | All | 0.000012 |
ORF7a | 79 | A79del | GCC | --- | 7865 | 7865 | All | 0.001504 |
ORF7a | 79 | A79D | gCc | gAc | 4791 | 4791 | AY.7 | 0.939044 |
ORF7a | 79 | A79del | GCC | --- | 2805 | 2805 | AY.4 | 0.004366 |
ORF7a | 79 | A79A | gcC | gcT | 1710 | 1877 | B.1.1.7 | 0.001531 |
ORF7a | 79 | A79A | gcC | gcA | 131 | 1877 | B.1.1.7 | 0.000117 |
ORF7a | 79 | A79A | gcC | gcG | 36 | 1877 | B.1.1.7 | 0.000032 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1679 | 1716 | All | 0.000321 |
ORF7a | 79 | A79del1 | gcC | gc- | 17 | 1716 | All | 0.000003 |
ORF7a | 79 | A79del1 | gCc | g-c | 6 | 1716 | All | 0.000001 |
ORF7a | 79 | A79del1 | GCc | -Nc | 4 | 1716 | All | 0.000001 |
ORF7a | 79 | A79del1 | GCc | -Ac | 3 | 1716 | All | 0.000001 |
ORF7a | 79 | A79del1 | GCc | -Tc | 2 | 1716 | All | 0 |
ORF7a | 79 | A79del1 | GCC | -NN | 2 | 1716 | All | 0 |
ORF7a | 79 | A79del1 | gCC | g-N | 2 | 1716 | All | 0 |
ORF7a | 79 | A79del1 | GcC | -cN | 1 | 1716 | All | 0 |
ORF7a | 79 | A79D | gCc | gAc | 1572 | 1572 | AY.7.2 | 0.879195 |
ORF7a | 79 | A79S | Gcc | Tcc | 1390 | 1391 | All | 0.000266 |
ORF7a | 79 | A79S | GcC | TcA | 1 | 1391 | All | 0 |
ORF7a | 79 | A79del | GCC | --- | 1231 | 1231 | B.1.1.7 | 0.001102 |
ORF7a | 79 | A79V | gCc | gTc | 988 | 1012 | All | 0.000189 |
ORF7a | 79 | A79V | gCC | gTT | 23 | 1012 | All | 0.000004 |
ORF7a | 79 | A79V | gCC | gTA | 1 | 1012 | All | 0 |
ORF7a | 79 | A79del1 | Gcc | -cc | 982 | 984 | B.1.617.2 | 0.003698 |
ORF7a | 79 | A79del1 | GCc | -Nc | 2 | 984 | B.1.617.2 | 0.000008 |
ORF7a | 79 | A79A | gcC | gcT | 720 | 781 | AY.4 | 0.001121 |
ORF7a | 79 | A79A | gcC | gcA | 56 | 781 | AY.4 | 0.000087 |
ORF7a | 79 | A79A | gcC | gcG | 5 | 781 | AY.4 | 0.000008 |
ORF7a | 79 | A79S | Gcc | Tcc | 731 | 731 | B.1.617.2 | 0.002753 |
ORF7a | 79 | A79A | gcC | gcT | 562 | 562 | B.1.1.486 | 0.886435 |
ORF7a | 79 | A79A | gcC | gcT | 226 | 441 | B.1.526 | 0.005312 |
ORF7a | 79 | A79A | gcC | gcA | 215 | 441 | B.1.526 | 0.005053 |
ORF7a | 79 | A79del | GCC | --- | 411 | 411 | AY.4.2 | 0.008914 |
ORF7a | 79 | A79A | gcC | gcT | 194 | 366 | B.1.2 | 0.001708 |
ORF7a | 79 | A79A | gcC | gcA | 172 | 366 | B.1.2 | 0.001515 |
ORF7a | 79 | A79A | gcC | gcT | 347 | 348 | B.1.1.214 | 0.019244 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 348 | B.1.1.214 | 0.000055 |
ORF7a | 79 | A79A | gcC | gcT | 261 | 307 | B.1.617.2 | 0.000983 |
ORF7a | 79 | A79A | gcC | gcA | 45 | 307 | B.1.617.2 | 0.000169 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 307 | B.1.617.2 | 0.000004 |
ORF7a | 79 | A79del | GCC | --- | 304 | 304 | B.1.617.2 | 0.001145 |
ORF7a | 79 | A79A | gcC | gcT | 239 | 263 | B.1.429 | 0.005623 |
ORF7a | 79 | A79A | gcC | gcA | 23 | 263 | B.1.429 | 0.000541 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 263 | B.1.429 | 0.000024 |
ORF7a | 79 | A79V | gCc | gTc | 208 | 210 | B.1.1.7 | 0.000186 |
ORF7a | 79 | A79V | gCC | gTT | 2 | 210 | B.1.1.7 | 0.000002 |
ORF7a | 79 | A79A | gcC | gcT | 198 | 203 | AY.43 | 0.000877 |
ORF7a | 79 | A79A | gcC | gcA | 4 | 203 | AY.43 | 0.000018 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 203 | AY.43 | 0.000004 |
ORF7a | 79 | A79del | GCC | --- | 192 | 192 | AY.103 | 0.001192 |
ORF7a | 79 | A79T | Gcc | Acc | 186 | 187 | All | 0.000036 |
ORF7a | 79 | A79T | GcC | AcG | 1 | 187 | All | 0 |
ORF7a | 79 | A79V | gCc | gTc | 184 | 184 | AY.4 | 0.000286 |
ORF7a | 79 | A79del | GCC | --- | 184 | 184 | AY.43 | 0.000815 |
ORF7a | 79 | A79A | gcC | gcT | 123 | 179 | AY.103 | 0.000764 |
ORF7a | 79 | A79A | gcC | gcA | 55 | 179 | AY.103 | 0.000341 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 179 | AY.103 | 0.000006 |
ORF7a | 79 | A79del | GCC | --- | 179 | 179 | AY.3 | 0.00178 |
ORF7a | 79 | A79del | GCC | --- | 179 | 179 | B.1.177.21 | 0.013688 |
ORF7a | 79 | A79del | GCC | --- | 176 | 176 | AY.39 | 0.004349 |
ORF7a | 79 | A79del1 | Gcc | -cc | 166 | 169 | AY.102 | 0.004401 |
ORF7a | 79 | A79del1 | GCc | -Nc | 2 | 169 | AY.102 | 0.000053 |
ORF7a | 79 | A79del1 | GCC | -NN | 1 | 169 | AY.102 | 0.000027 |
ORF7a | 79 | A79D | gCc | gAc | 162 | 162 | AY.4 | 0.000252 |
ORF7a | 79 | A79del | GCC | --- | 161 | 161 | AY.44 | 0.00098 |
ORF7a | 79 | A79S | Gcc | Tcc | 151 | 151 | AY.43 | 0.000669 |
ORF7a | 79 | A79del2 | GCc | --c | 92 | 148 | All | 0.000018 |
ORF7a | 79 | A79del2 | gCC | g-- | 55 | 148 | All | 0.000011 |
ORF7a | 79 | A79del2 | GCC | --N | 1 | 148 | All | 0 |
ORF7a | 79 | A79A | gcC | gcT | 123 | 128 | AY.3 | 0.001223 |
ORF7a | 79 | A79A | gcC | gcA | 5 | 128 | AY.3 | 0.00005 |
ORF7a | 79 | A79del | GCC | --- | 124 | 124 | AY.29 | 0.001956 |
ORF7a | 79 | A79D | gCc | gAc | 119 | 119 | AY.42 | 0.004787 |
ORF7a | 79 | A79D | gCc | gAc | 117 | 117 | B.1.1.7 | 0.000105 |
ORF7a | 79 | A79A | gcC | gcT | 111 | 114 | AY.47 | 0.003453 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 114 | AY.47 | 0.000093 |
ORF7a | 79 | A79A | gcC | gcT | 101 | 108 | B.1 | 0.000925 |
ORF7a | 79 | A79A | gcC | gcA | 7 | 108 | B.1 | 0.000064 |
ORF7a | 79 | A79V | gCc | gTc | 102 | 102 | AY.46.6 | 0.007365 |
ORF7a | 79 | A79A | gcC | gcT | 98 | 101 | B.1.243 | 0.006819 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 101 | B.1.243 | 0.000209 |
ORF7a | 79 | A79del | GCC | --- | 96 | 96 | AY.26 | 0.002718 |
ORF7a | 79 | A79del1 | Gcc | -cc | 95 | 96 | AY.43 | 0.000421 |
ORF7a | 79 | A79del1 | gcC | gc- | 1 | 96 | AY.43 | 0.000004 |
ORF7a | 79 | A79del2 | GCc | --c | 51 | 93 | B.1.1.7 | 0.000046 |
ORF7a | 79 | A79del2 | gCC | g-- | 42 | 93 | B.1.1.7 | 0.000038 |
ORF7a | 79 | A79A | gcC | gcT | 79 | 91 | B.1.1 | 0.001433 |
ORF7a | 79 | A79A | gcC | gcA | 12 | 91 | B.1.1 | 0.000218 |
ORF7a | 79 | A79A | gcC | gcT | 75 | 90 | P.1 | 0.001182 |
ORF7a | 79 | A79A | gcC | gcA | 11 | 90 | P.1 | 0.000173 |
ORF7a | 79 | A79A | gcC | gcG | 4 | 90 | P.1 | 0.000063 |
ORF7a | 79 | A79P | Gcc | Ccc | 87 | 88 | All | 0.000017 |
ORF7a | 79 | A79P | GcC | CcA | 1 | 88 | All | 0 |
ORF7a | 79 | A79del | GCC | --- | 87 | 87 | AY.25 | 0.000523 |
ORF7a | 79 | A79D | gCc | gAc | 86 | 86 | B.1.617.2 | 0.000324 |
ORF7a | 79 | A79A | gcC | gcT | 72 | 85 | AY.39 | 0.001779 |
ORF7a | 79 | A79A | gcC | gcA | 13 | 85 | AY.39 | 0.000321 |
ORF7a | 79 | A79A | gcC | gcT | 82 | 82 | A.2.5 | 0.040918 |
ORF7a | 79 | A79del | GCC | --- | 78 | 78 | AY.100 | 0.003589 |
ORF7a | 79 | A79V | gCc | gTc | 78 | 78 | AY.4.5 | 0.008384 |
ORF7a | 79 | A79del | GCC | --- | 73 | 73 | AY.42 | 0.002937 |
ORF7a | 79 | A79del1 | Gcc | -cc | 64 | 72 | AY.39 | 0.001582 |
ORF7a | 79 | A79del1 | gcC | gc- | 7 | 72 | AY.39 | 0.000173 |
ORF7a | 79 | A79del1 | GCC | -NN | 1 | 72 | AY.39 | 0.000025 |
ORF7a | 79 | A79del | GCC | --- | 72 | 72 | AY.98 | 0.005688 |
ORF7a | 79 | A79S | Gcc | Tcc | 71 | 72 | B.1.1.7 | 0.000064 |
ORF7a | 79 | A79S | GcC | TcA | 1 | 72 | B.1.1.7 | 0.000001 |
ORF7a | 79 | A79del | GCC | --- | 71 | 71 | B.1.526 | 0.001669 |
ORF7a | 79 | A79del1 | Gcc | -cc | 70 | 70 | AY.120 | 0.002603 |
ORF7a | 79 | A79S | Gcc | Tcc | 67 | 67 | AY.102 | 0.001776 |
ORF7a | 79 | A79A | gcC | gcA | 56 | 66 | P.1.14 | 0.002677 |
ORF7a | 79 | A79A | gcC | gcT | 10 | 66 | P.1.14 | 0.000478 |
ORF7a | 79 | A79A | gcC | gcT | 42 | 65 | AY.25 | 0.000253 |
ORF7a | 79 | A79A | gcC | gcA | 23 | 65 | AY.25 | 0.000138 |
ORF7a | 79 | A79A | gcC | gcT | 65 | 65 | P.2 | 0.012131 |
ORF7a | 79 | A79del | GCC | --- | 64 | 64 | B.1.177 | 0.000843 |
ORF7a | 79 | A79del | GCC | --- | 62 | 62 | AY.120 | 0.002305 |
ORF7a | 79 | A79A | gcC | gcA | 49 | 61 | AY.44 | 0.000298 |
ORF7a | 79 | A79A | gcC | gcT | 10 | 61 | AY.44 | 0.000061 |
ORF7a | 79 | A79A | gcC | gcG | 2 | 61 | AY.44 | 0.000012 |
ORF7a | 79 | A79del | GCC | --- | 60 | 60 | B.1.2 | 0.000528 |
ORF7a | 79 | A79S | Gcc | Tcc | 59 | 59 | AY.4 | 0.000092 |
ORF7a | 79 | A79A | gcC | gcT | 56 | 58 | AY.102 | 0.001485 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 58 | AY.102 | 0.000053 |
ORF7a | 79 | A79T | Gcc | Acc | 55 | 55 | AY.4 | 0.000086 |
ORF7a | 79 | A79A | gcC | gcA | 38 | 51 | AY.100 | 0.001748 |
ORF7a | 79 | A79A | gcC | gcT | 13 | 51 | AY.100 | 0.000598 |
ORF7a | 79 | A79A | gcC | gcT | 46 | 50 | B.1.351 | 0.001367 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 50 | B.1.351 | 0.000089 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 50 | B.1.351 | 0.00003 |
ORF7a | 79 | A79del1 | Gcc | -cc | 49 | 49 | AY.46.4 | 0.008061 |
ORF7a | 79 | A79S | Gcc | Tcc | 47 | 47 | AY.120 | 0.001747 |
ORF7a | 79 | A79del | GCC | --- | 44 | 44 | B.1.621 | 0.003895 |
ORF7a | 79 | A79del | GCC | --- | 43 | 43 | B.1 | 0.000394 |
ORF7a | 79 | A79del | GCC | --- | 41 | 41 | B.1.1.284 | 0.004403 |
ORF7a | 79 | A79A | gcC | gcT | 38 | 40 | B.1.177 | 0.0005 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 40 | B.1.177 | 0.000013 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 40 | B.1.177 | 0.000013 |
ORF7a | 79 | A79del | GCC | --- | 40 | 40 | P.1 | 0.00063 |
ORF7a | 79 | A79del1 | Gcc | -cc | 33 | 37 | AY.4 | 0.000051 |
ORF7a | 79 | A79del1 | gcC | gc- | 3 | 37 | AY.4 | 0.000005 |
ORF7a | 79 | A79del1 | GcC | -cN | 1 | 37 | AY.4 | 0.000002 |
ORF7a | 79 | A79D | gCc | gAc | 37 | 37 | AY.6 | 0.001522 |
ORF7a | 79 | A79G | gCc | gGc | 24 | 36 | All | 0.000005 |
ORF7a | 79 | A79G | gCC | gGA | 12 | 36 | All | 0.000002 |
ORF7a | 79 | A79P | Gcc | Ccc | 36 | 36 | AY.102 | 0.000955 |
ORF7a | 79 | A79A | gcC | gcT | 36 | 36 | B.1.558 | 0.164384 |
ORF7a | 79 | A79A | gcC | gcT | 35 | 35 | B.1.371 | 0.039282 |
ORF7a | 79 | A79del | GCC | --- | 34 | 34 | AY.3.1 | 0.002899 |
ORF7a | 79 | A79del | GCC | --- | 34 | 34 | B.1.160 | 0.00106 |
ORF7a | 79 | A79del1 | Gcc | -cc | 30 | 33 | AY.103 | 0.000186 |
ORF7a | 79 | A79del1 | gCc | g-c | 1 | 33 | AY.103 | 0.000006 |
ORF7a | 79 | A79del1 | gCC | g-N | 1 | 33 | AY.103 | 0.000006 |
ORF7a | 79 | A79del1 | gcC | gc- | 1 | 33 | AY.103 | 0.000006 |
ORF7a | 79 | A79A | gcC | gcT | 22 | 33 | AY.26 | 0.000623 |
ORF7a | 79 | A79A | gcC | gcA | 11 | 33 | AY.26 | 0.000311 |
ORF7a | 79 | A79S | Gcc | Tcc | 33 | 33 | AY.46 | 0.003435 |
ORF7a | 79 | A79V | gCc | gTc | 32 | 32 | AY.103 | 0.000199 |
ORF7a | 79 | A79del | GCC | --- | 32 | 32 | AY.119 | 0.00113 |
ORF7a | 79 | A79del | GCC | --- | 32 | 32 | AY.46.6 | 0.002311 |
ORF7a | 79 | A79del | GCC | --- | 32 | 32 | AY.47 | 0.000995 |
ORF7a | 79 | A79A | gcC | gcT | 28 | 32 | B.1.160 | 0.000873 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 32 | B.1.160 | 0.000094 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 32 | B.1.160 | 0.000031 |
ORF7a | 79 | A79V | gCc | gTc | 30 | 30 | B.1.2 | 0.000264 |
ORF7a | 79 | A79A | gcC | gcT | 30 | 30 | B.1.609 | 0.014382 |
ORF7a | 79 | A79del | GCC | --- | 29 | 29 | AY.20 | 0.001127 |
ORF7a | 79 | A79del | GCC | --- | 29 | 29 | AY.36 | 0.004298 |
ORF7a | 79 | A79del | GCC | --- | 29 | 29 | AY.6 | 0.001193 |
ORF7a | 79 | A79A | gcC | gcT | 22 | 27 | AY.4.2 | 0.000477 |
ORF7a | 79 | A79A | gcC | gcA | 5 | 27 | AY.4.2 | 0.000108 |
ORF7a | 79 | A79A | gcC | gcT | 27 | 27 | B.1.1.434 | 0.009411 |
ORF7a | 79 | A79del | GCC | --- | 27 | 27 | B.1.351 | 0.000803 |
ORF7a | 79 | A79V | gCc | gTc | 27 | 27 | B.1.617.2 | 0.000102 |
ORF7a | 79 | A79T | Gcc | Acc | 26 | 26 | AY.3 | 0.000259 |
ORF7a | 79 | A79S | Gcc | Tcc | 26 | 26 | AY.39 | 0.000642 |
ORF7a | 79 | A79del | GCC | --- | 26 | 26 | B.1.1.214 | 0.001442 |
ORF7a | 79 | A79del | GCC | --- | 25 | 25 | AY.7.2 | 0.013982 |
ORF7a | 79 | A79del | GCC | --- | 25 | 25 | B.1.637 | 0.001827 |
ORF7a | 79 | A79A | gcC | gcT | 21 | 24 | AY.118 | 0.001316 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 24 | AY.118 | 0.000188 |
ORF7a | 79 | A79A | gcC | gcT | 22 | 24 | B.1.595 | 0.005741 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 24 | B.1.595 | 0.000522 |
ORF7a | 79 | A79A | gcC | gcT | 23 | 23 | B.1.1.275 | 0.258427 |
ORF7a | 79 | A79A | gcC | gcT | 23 | 23 | B.1.637 | 0.001681 |
ORF7a | 79 | A79del | GCC | --- | 22 | 22 | AY.5 | 0.000454 |
ORF7a | 79 | A79P | Gcc | Ccc | 22 | 22 | B.1.617.2 | 0.000083 |
ORF7a | 79 | A79A | gcC | gcT | 22 | 22 | P.1.15 | 0.005112 |
ORF7a | 79 | A79del | GCC | --- | 21 | 21 | AY.46.4 | 0.003455 |
ORF7a | 79 | A79A | gcC | gcT | 18 | 21 | AY.68 | 0.004927 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 21 | AY.68 | 0.000821 |
ORF7a | 79 | A79A | gcC | gcT | 17 | 21 | B.1.1.519 | 0.000675 |
ORF7a | 79 | A79A | gcC | gcA | 4 | 21 | B.1.1.519 | 0.000159 |
ORF7a | 79 | A79del | GCC | --- | 20 | 20 | AY.102 | 0.00053 |
ORF7a | 79 | A79del1 | Gcc | -cc | 20 | 20 | AY.54 | 0.001907 |
ORF7a | 79 | A79A | gcC | gcT | 20 | 20 | AY.75 | 0.00112 |
ORF7a | 79 | A79del | GCC | --- | 20 | 20 | B.1.429 | 0.000471 |
ORF7a | 79 | A79D | gCc | gAc | 12 | 19 | AY.5 | 0.000248 |
ORF7a | 79 | A79D | gCC | gAT | 7 | 19 | AY.5 | 0.000145 |
ORF7a | 79 | A79del | GCC | --- | 19 | 19 | AY.75 | 0.001064 |
ORF7a | 79 | A79V | gCc | gTc | 19 | 19 | AY.99.2 | 0.001751 |
ORF7a | 79 | A79V | gCc | gTc | 18 | 19 | B.1 | 0.000165 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 19 | B.1 | 0.000009 |
ORF7a | 79 | A79T | Gcc | Acc | 19 | 19 | B.1.1.7 | 0.000017 |
ORF7a | 79 | A79A | gcC | gcT | 19 | 19 | B.1.177.75 | 0.019771 |
ORF7a | 79 | A79A | gcC | gcT | 19 | 19 | B.1.241 | 0.015422 |
ORF7a | 79 | A79A | gcC | gcT | 19 | 19 | B.1.427 | 0.000959 |
ORF7a | 79 | A79V | gCc | gTc | 18 | 18 | AY.25 | 0.000108 |
ORF7a | 79 | A79V | gCc | gTc | 14 | 18 | B.1.1 | 0.000254 |
ORF7a | 79 | A79V | gCC | gTT | 4 | 18 | B.1.1 | 0.000073 |
ORF7a | 79 | A79T | Gcc | Acc | 18 | 18 | B.1.177 | 0.000237 |
ORF7a | 79 | A79S | Gcc | Tcc | 18 | 18 | B.1.177 | 0.000237 |
ORF7a | 79 | A79D | gCc | gAc | 17 | 17 | AY.11 | 0.022758 |
ORF7a | 79 | A79A | gcC | gcT | 15 | 17 | AY.20 | 0.000583 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 17 | AY.20 | 0.000078 |
ORF7a | 79 | A79A | gcC | gcT | 17 | 17 | AY.67 | 0.007892 |
ORF7a | 79 | A79A | gcC | gcT | 17 | 17 | B.1.1.141 | 0.034205 |
ORF7a | 79 | A79A | gcC | gcT | 12 | 17 | B.1.258 | 0.000799 |
ORF7a | 79 | A79A | gcC | gcA | 5 | 17 | B.1.258 | 0.000333 |
ORF7a | 79 | A79del | GCC | --- | 16 | 16 | AY.98.1 | 0.000775 |
ORF7a | 79 | A79A | gcC | gcT | 13 | 16 | B.1.36 | 0.001897 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 16 | B.1.36 | 0.000438 |
ORF7a | 79 | A79A | gcC | gcT | 16 | 16 | B.1.369 | 0.004564 |
ORF7a | 79 | A79A | gcC | gcT | 14 | 15 | AY.119 | 0.000494 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 15 | AY.119 | 0.000035 |
ORF7a | 79 | A79del | GCC | --- | 15 | 15 | AY.30 | 0.005936 |
ORF7a | 79 | A79V | gCc | gTc | 15 | 15 | AY.9.1 | 0.001256 |
ORF7a | 79 | A79T | Gcc | Acc | 15 | 15 | B.1.177.21 | 0.001147 |
ORF7a | 79 | A79V | gCc | gTc | 13 | 15 | B.1.351 | 0.000386 |
ORF7a | 79 | A79V | gCC | gTT | 2 | 15 | B.1.351 | 0.000059 |
ORF7a | 79 | A79del | GCC | --- | 15 | 15 | C.37 | 0.001741 |
ORF7a | 79 | A79del | GCC | --- | 14 | 14 | AY.117 | 0.001183 |
ORF7a | 79 | A79A | gcC | gcT | 13 | 14 | AY.29 | 0.000205 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 14 | AY.29 | 0.000016 |
ORF7a | 79 | A79del1 | Gcc | -cc | 13 | 14 | AY.44 | 0.000079 |
ORF7a | 79 | A79del1 | gCc | g-c | 1 | 14 | AY.44 | 0.000006 |
ORF7a | 79 | A79A | gcC | gcT | 14 | 14 | B.1.1.192 | 0.032333 |
ORF7a | 79 | A79del | GCC | --- | 14 | 14 | B.1.1.258 | 0.045603 |
ORF7a | 79 | A79A | gcC | gcT | 10 | 14 | B.1.1.33 | 0.004209 |
ORF7a | 79 | A79A | gcC | gcA | 4 | 14 | B.1.1.33 | 0.001684 |
ORF7a | 79 | A79D | gCc | gAc | 13 | 13 | AY.113 | 0.001851 |
ORF7a | 79 | A79del | GCC | --- | 13 | 13 | AY.23 | 0.000907 |
ORF7a | 79 | A79A | gcC | gcT | 12 | 13 | AY.5 | 0.000248 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 13 | AY.5 | 0.000021 |
ORF7a | 79 | A79del | GCC | --- | 13 | 13 | B.1.1 | 0.000236 |
ORF7a | 79 | A79del | GCC | --- | 13 | 13 | B.1.525 | 0.001471 |
ORF7a | 79 | A79del | GCC | --- | 13 | 13 | R.1 | 0.00117 |
ORF7a | 79 | A79del | GCC | --- | 12 | 12 | AY.116 | 0.003441 |
ORF7a | 79 | A79A | gcC | gcA | 6 | 12 | AY.120 | 0.000223 |
ORF7a | 79 | A79A | gcC | gcT | 6 | 12 | AY.120 | 0.000223 |
ORF7a | 79 | A79del | GCC | --- | 12 | 12 | AY.121 | 0.001624 |
ORF7a | 79 | A79A | gcC | gcT | 12 | 12 | AY.4.2.1 | 0.001788 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 12 | AY.42 | 0.000322 |
ORF7a | 79 | A79A | gcC | gcA | 4 | 12 | AY.42 | 0.000161 |
ORF7a | 79 | A79V | gCc | gTc | 12 | 12 | AY.44 | 0.000073 |
ORF7a | 79 | A79del1 | Gcc | -cc | 12 | 12 | AY.68 | 0.003285 |
ORF7a | 79 | A79A | gcC | gcT | 12 | 12 | B.1.1.39 | 0.006116 |
ORF7a | 79 | A79A | gcC | gcT | 12 | 12 | B.1.1.70 | 0.004093 |
ORF7a | 79 | A79del | GCC | --- | 12 | 12 | B.1.324 | 0.019262 |
ORF7a | 79 | A79del | GCC | --- | 11 | 11 | AY.110 | 0.00124 |
ORF7a | 79 | A79del | GCC | --- | 11 | 11 | AY.71 | 0.005226 |
ORF7a | 79 | A79D | gCc | gAc | 11 | 11 | AY.88 | 0.009726 |
ORF7a | 79 | A79del | GCC | --- | 11 | 11 | AY.9 | 0.000744 |
ORF7a | 79 | A79del1 | Gcc | -cc | 7 | 11 | B.1.1.7 | 0.000006 |
ORF7a | 79 | A79del1 | GCc | -Tc | 1 | 11 | B.1.1.7 | 0.000001 |
ORF7a | 79 | A79del1 | gCc | g-c | 1 | 11 | B.1.1.7 | 0.000001 |
ORF7a | 79 | A79del1 | gcC | gc- | 1 | 11 | B.1.1.7 | 0.000001 |
ORF7a | 79 | A79del1 | gCC | g-N | 1 | 11 | B.1.1.7 | 0.000001 |
ORF7a | 79 | A79del2 | GCc | --c | 11 | 11 | B.1.177 | 0.000145 |
ORF7a | 79 | A79A | gcC | gcT | 11 | 11 | B.1.541 | 0.048673 |
ORF7a | 79 | A79del | GCC | --- | 11 | 11 | B.1.596 | 0.000959 |
ORF7a | 79 | A79A | gcC | gcA | 11 | 11 | N.7 | 0.323529 |
ORF7a | 79 | A79del1 | Gcc | -cc | 10 | 10 | AY.106 | 0.003349 |
ORF7a | 79 | A79S | Gcc | Tcc | 10 | 10 | AY.20 | 0.000389 |
ORF7a | 79 | A79G | gCC | gGA | 10 | 10 | AY.25 | 0.00006 |
ORF7a | 79 | A79A | gcC | gcA | 5 | 10 | AY.33 | 0.000334 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 10 | AY.33 | 0.000334 |
ORF7a | 79 | A79del1 | Gcc | -cc | 10 | 10 | AY.37 | 0.003161 |
ORF7a | 79 | A79S | Gcc | Tcc | 10 | 10 | AY.37 | 0.003161 |
ORF7a | 79 | A79V | gCc | gTc | 10 | 10 | AY.39 | 0.000247 |
ORF7a | 79 | A79del | GCC | --- | 10 | 10 | AY.39.1 | 0.000396 |
ORF7a | 79 | A79V | gCc | gTc | 10 | 10 | AY.4.2.1 | 0.00149 |
ORF7a | 79 | A79V | gCc | gTc | 10 | 10 | AY.43 | 0.000044 |
ORF7a | 79 | A79D | gCc | gAc | 10 | 10 | AY.46.4 | 0.001645 |
ORF7a | 79 | A79S | Gcc | Tcc | 10 | 10 | AY.47 | 0.000311 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 10 | AY.54 | 0.000763 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 10 | AY.54 | 0.000191 |
ORF7a | 79 | A79A | gcC | gcT | 10 | 10 | AY.98 | 0.00079 |
ORF7a | 79 | A79A | gcC | gcT | 10 | 10 | B.1.1.348 | 0.007962 |
ORF7a | 79 | A79del | GCC | --- | 10 | 10 | B.1.1.519 | 0.000397 |
ORF7a | 79 | A79G | gCc | gGc | 10 | 10 | B.1.1.7 | 0.000009 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 10 | C.37 | 0.000812 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 10 | C.37 | 0.000348 |
ORF7a | 79 | A79del | GCC | --- | 10 | 10 | Q.8 | 0.001649 |
ORF7a | 79 | A79S | Gcc | Tcc | 9 | 9 | AY.117 | 0.000761 |
ORF7a | 79 | A79D | gCc | gAc | 9 | 9 | AY.121 | 0.001218 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 9 | AY.4.5 | 0.00086 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 9 | AY.4.5 | 0.000107 |
ORF7a | 79 | A79S | Gcc | Tcc | 9 | 9 | AY.44 | 0.000055 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 9 | AY.46.6 | 0.000578 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 9 | AY.46.6 | 0.000072 |
ORF7a | 79 | A79A | gcC | gcT | 9 | 9 | AY.69 | 0.00168 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 9 | AY.9.2 | 0.000257 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 9 | AY.9.2 | 0.000073 |
ORF7a | 79 | A79S | Gcc | Tcc | 9 | 9 | B.1 | 0.000082 |
ORF7a | 79 | A79A | gcC | gcT | 9 | 9 | B.1.1.402 | 0.1 |
ORF7a | 79 | A79A | gcC | gcT | 9 | 9 | B.1.1.50 | 0.00611 |
ORF7a | 79 | A79A | gcC | gcT | 9 | 9 | B.1.239 | 0.010989 |
ORF7a | 79 | A79del | GCC | --- | 9 | 9 | B.1.427 | 0.000454 |
ORF7a | 79 | A79A | gcC | gcT | 9 | 9 | B.1.551 | 0.011613 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 9 | B.1.596 | 0.000697 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 9 | B.1.596 | 0.000087 |
ORF7a | 79 | A79del | GCC | --- | 9 | 9 | L.1 | 0.017143 |
ORF7a | 79 | A79S | Gcc | Tcc | 8 | 8 | AY.103 | 0.00005 |
ORF7a | 79 | A79del | GCC | --- | 8 | 8 | AY.113 | 0.001139 |
ORF7a | 79 | A79del | GCC | --- | 8 | 8 | AY.118 | 0.000501 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 8 | AY.3.1 | 0.000597 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 8 | AY.3.1 | 0.000085 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 8 | AY.34 | 0.000776 |
ORF7a | 79 | A79del1 | Gcc | -cc | 7 | 8 | AY.42 | 0.000282 |
ORF7a | 79 | A79del1 | gcC | gc- | 1 | 8 | AY.42 | 0.00004 |
ORF7a | 79 | A79D | gCc | gAc | 8 | 8 | AY.43 | 0.000035 |
ORF7a | 79 | A79del1 | Gcc | -cc | 8 | 8 | AY.46.2 | 0.005083 |
ORF7a | 79 | A79V | gCc | gTc | 8 | 8 | AY.61 | 0.000838 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 8 | AY.61 | 0.000838 |
ORF7a | 79 | A79del | GCC | --- | 8 | 8 | AY.7 | 0.001568 |
ORF7a | 79 | A79del | GCC | --- | 8 | 8 | AY.99.2 | 0.000737 |
ORF7a | 79 | A79del | GCC | --- | 8 | 8 | B.1.1.231 | 0.024768 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 8 | B.1.1.311 | 0.002865 |
ORF7a | 79 | A79V | gCc | gTc | 8 | 8 | B.1.1.348 | 0.006369 |
ORF7a | 79 | A79del | GCC | --- | 8 | 8 | B.1.160.31 | 0.064516 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 8 | B.1.396 | 0.005646 |
ORF7a | 79 | A79A | gcC | gcT | 8 | 8 | B.1.561 | 0.003176 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 8 | B.1.621 | 0.000354 |
ORF7a | 79 | A79A | gcC | gcA | 4 | 8 | B.1.621 | 0.000354 |
ORF7a | 79 | A79del1 | Gcc | -cc | 7 | 7 | AY.119 | 0.000247 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 7 | AY.121 | 0.000947 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 7 | AY.14 | 0.000616 |
ORF7a | 79 | A79del | GCC | --- | 7 | 7 | AY.29.1 | 0.001544 |
ORF7a | 79 | A79del | GCC | --- | 7 | 7 | AY.35 | 0.001631 |
ORF7a | 79 | A79P | Gcc | Ccc | 7 | 7 | AY.4 | 0.000011 |
ORF7a | 79 | A79del | GCC | --- | 7 | 7 | AY.45 | 0.000852 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 7 | AY.46 | 0.000729 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 7 | AY.5.3 | 0.002362 |
ORF7a | 79 | A79G | gCc | gGc | 7 | 7 | AY.7.1 | 0.000789 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 7 | B.1.1.222 | 0.001428 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 7 | B.1.1.224 | 0.1 |
ORF7a | 79 | A79A | gcC | gcT | 7 | 7 | B.1.1.284 | 0.000752 |
ORF7a | 79 | A79V | gCc | gTc | 6 | 7 | B.1.177 | 0.000079 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 7 | B.1.177 | 0.000013 |
ORF7a | 79 | A79A | gcC | gcT | 6 | 7 | B.1.177.82 | 0.002864 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 7 | B.1.177.82 | 0.000477 |
ORF7a | 79 | A79S | Gcc | Tcc | 7 | 7 | B.1.2 | 0.000062 |
ORF7a | 79 | A79V | gCc | gTc | 7 | 7 | B.1.526 | 0.000165 |
ORF7a | 79 | A79T | Gcc | Acc | 7 | 7 | B.1.617.2 | 0.000026 |
ORF7a | 79 | A79V | gCc | gTc | 7 | 7 | P.1 | 0.00011 |
ORF7a | 79 | A79V | gCc | gTc | 7 | 7 | Q.1 | 0.000884 |
ORF7a | 79 | A79del1 | Gcc | -cc | 6 | 6 | AY.110 | 0.000676 |
ORF7a | 79 | A79del | GCC | --- | 6 | 6 | AY.120.1 | 0.001926 |
ORF7a | 79 | A79A | gcC | gcT | 6 | 6 | AY.23 | 0.000418 |
ORF7a | 79 | A79V | gCc | gTc | 6 | 6 | AY.23 | 0.000418 |
ORF7a | 79 | A79V | gCc | gTc | 6 | 6 | AY.3 | 0.00006 |
ORF7a | 79 | A79A | gcC | gcT | 6 | 6 | AY.39.1 | 0.000238 |
ORF7a | 79 | A79D | gCc | gAc | 6 | 6 | AY.45 | 0.00073 |
ORF7a | 79 | A79S | Gcc | Tcc | 6 | 6 | AY.45 | 0.00073 |
ORF7a | 79 | A79D | gCc | gAc | 6 | 6 | AY.54 | 0.000572 |
ORF7a | 79 | A79D | gCc | gAc | 6 | 6 | AY.84 | 0.002625 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 6 | B.1.1.28 | 0.001556 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 6 | B.1.1.28 | 0.000311 |
ORF7a | 79 | A79V | gCc | gTc | 6 | 6 | B.1.1.519 | 0.000238 |
ORF7a | 79 | A79P | Gcc | Ccc | 6 | 6 | B.1.177 | 0.000079 |
ORF7a | 79 | A79del | GCC | --- | 6 | 6 | B.1.258 | 0.000399 |
ORF7a | 79 | A79S | Gcc | Tcc | 6 | 6 | B.1.351 | 0.000178 |
ORF7a | 79 | A79A | gcC | gcT | 6 | 6 | B.1.499 | 0.006303 |
ORF7a | 79 | A79A | gcC | gcT | 6 | 6 | B.1.562 | 0.111111 |
ORF7a | 79 | A79A | gcC | gcT | 6 | 6 | C.36 | 0.005464 |
ORF7a | 79 | A79del | GCC | --- | 6 | 6 | P.1.15 | 0.001394 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 6 | P.1.7 | 0.001596 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 6 | P.1.7 | 0.000319 |
ORF7a | 79 | A79Y | GCc | TAc | 4 | 5 | All | 0.000001 |
ORF7a | 79 | A79Y | GCC | TAT | 1 | 5 | All | 0 |
ORF7a | 79 | A79V | gCc | gTc | 5 | 5 | AY.102 | 0.000133 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | AY.106 | 0.001674 |
ORF7a | 79 | A79D | gCc | gAc | 5 | 5 | AY.111 | 0.000916 |
ORF7a | 79 | A79S | Gcc | Tcc | 5 | 5 | AY.113 | 0.000712 |
ORF7a | 79 | A79S | Gcc | Tcc | 5 | 5 | AY.118 | 0.000313 |
ORF7a | 79 | A79del2 | gCC | g-- | 5 | 5 | AY.120 | 0.000186 |
ORF7a | 79 | A79T | Gcc | Acc | 5 | 5 | AY.25 | 0.00003 |
ORF7a | 79 | A79V | gCc | gTc | 5 | 5 | AY.3.1 | 0.000426 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | AY.34 | 0.000485 |
ORF7a | 79 | A79D | gCc | gAc | 5 | 5 | AY.4.3 | 0.004209 |
ORF7a | 79 | A79del1 | Gcc | -cc | 5 | 5 | AY.46.1 | 0.005133 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | AY.61 | 0.000524 |
ORF7a | 79 | A79D | gCc | gAc | 5 | 5 | AY.75 | 0.00028 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | AY.80 | 0.005643 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | AY.9.2 | 0.000184 |
ORF7a | 79 | A79del1 | Gcc | -cc | 5 | 5 | AY.98 | 0.000395 |
ORF7a | 79 | A79S | Gcc | Tcc | 5 | 5 | AY.99.2 | 0.000461 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | B.1.1.1 | 0.001633 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | B.1.1.25 | 0.002843 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | B.1.1.294 | 0.006329 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | B.1.1.316 | 0.004625 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | B.1.1.38 | 0.294118 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | B.1.177.10 | 0.00439 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | B.1.177.12 | 0.000758 |
ORF7a | 79 | A79T | Gcc | Acc | 5 | 5 | B.1.221 | 0.000355 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 5 | B.1.221 | 0.000284 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 5 | B.1.221 | 0.000071 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | B.1.234 | 0.00066 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | B.1.346 | 0.006553 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | B.1.375 | 0.004098 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 5 | B.1.525 | 0.000339 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 5 | B.1.525 | 0.000226 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | B.1.70 | 0.121951 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | C.16 | 0.005302 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | C.36.3 | 0.002836 |
ORF7a | 79 | A79del | GCC | --- | 5 | 5 | P.2 | 0.000933 |
ORF7a | 79 | A79A | gcC | gcT | 5 | 5 | Q.4 | 0.002274 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | A | 0.001548 |
ORF7a | 79 | A79del1 | Gcc | -cc | 4 | 4 | AY.111 | 0.000733 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 4 | AY.113 | 0.000427 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 4 | AY.113 | 0.000142 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | AY.14 | 0.000352 |
ORF7a | 79 | A79V | gCc | gTc | 4 | 4 | AY.16 | 0.001519 |
ORF7a | 79 | A79V | gCc | gTc | 4 | 4 | AY.27 | 0.000259 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | AY.29.1 | 0.000882 |
ORF7a | 79 | A79del2 | GCc | --c | 4 | 4 | AY.3.1 | 0.000341 |
ORF7a | 79 | A79del2 | GCc | --c | 3 | 4 | AY.4 | 0.000005 |
ORF7a | 79 | A79del2 | gCC | g-- | 1 | 4 | AY.4 | 0.000002 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | AY.4.5 | 0.00043 |
ORF7a | 79 | A79del1 | Gcc | -cc | 4 | 4 | AY.45 | 0.000487 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 4 | AY.45 | 0.000365 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 4 | AY.45 | 0.000122 |
ORF7a | 79 | A79del1 | Gcc | -cc | 4 | 4 | AY.47 | 0.000124 |
ORF7a | 79 | A79S | Gcc | Tcc | 4 | 4 | AY.5 | 0.000083 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | AY.54 | 0.000381 |
ORF7a | 79 | A79D | gCc | gAc | 4 | 4 | AY.58 | 0.00363 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | AY.62 | 0.001743 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | AY.66 | 0.004278 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | AY.7.1 | 0.000451 |
ORF7a | 79 | A79del1 | Gcc | -cc | 4 | 4 | AY.74 | 0.000463 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 4 | AY.75.1 | 0.000361 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 4 | AY.75.1 | 0.000361 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | AY.99.2 | 0.000369 |
ORF7a | 79 | A79V | gCc | gTc | 4 | 4 | B.1.1.271 | 0.222222 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | B.1.1.369 | 0.001785 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.1.412 | 0.030534 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.1.58 | 0.021505 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.177.7 | 0.000659 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.177.73 | 0.002265 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.177.81 | 0.000757 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.177.86 | 0.000734 |
ORF7a | 79 | A79T | Gcc | Acc | 4 | 4 | B.1.2 | 0.000035 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | B.1.214.2 | 0.002398 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | B.1.243 | 0.000278 |
ORF7a | 79 | A79V | gCc | gTc | 4 | 4 | B.1.243 | 0.000278 |
ORF7a | 79 | A79del2 | GCc | --c | 4 | 4 | B.1.351 | 0.000119 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.351.2 | 0.00121 |
ORF7a | 79 | A79del | GCC | --- | 4 | 4 | B.1.351.2 | 0.00121 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 4 | B.1.351.3 | 0.002629 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 4 | B.1.351.3 | 0.000876 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.36.29 | 0.002069 |
ORF7a | 79 | A79V | gCc | gTc | 4 | 4 | B.1.427 | 0.000202 |
ORF7a | 79 | A79V | gCc | gTc | 4 | 4 | B.1.429 | 0.000094 |
ORF7a | 79 | A79S | Gcc | Tcc | 4 | 4 | B.1.526 | 0.000094 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | B.1.617.1 | 0.000516 |
ORF7a | 79 | A79G | gCc | gGc | 4 | 4 | C.37 | 0.000464 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | Q.2 | 0.002454 |
ORF7a | 79 | A79A | gcC | gcT | 4 | 4 | Q.3 | 0.00058 |
ORF7a | 79 | A79I | GCC | ATT | 2 | 3 | All | 0 |
ORF7a | 79 | A79N | GCC | AAT | 2 | 3 | All | 0 |
ORF7a | 79 | A79I | GCC | ATA | 1 | 3 | All | 0 |
ORF7a | 79 | A79N | GCc | AAc | 1 | 3 | All | 0 |
ORF7a | 79 | A79D | gCc | gAc | 3 | 3 | AY.106 | 0.001005 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | AY.114 | 0.000693 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | AY.116 | 0.00086 |
ORF7a | 79 | A79D | gCc | gAc | 3 | 3 | AY.116 | 0.00086 |
ORF7a | 79 | A79V | gCc | gTc | 3 | 3 | AY.116.1 | 0.000934 |
ORF7a | 79 | A79del1 | Gcc | -cc | 3 | 3 | AY.118 | 0.000188 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | AY.13 | 0.000483 |
ORF7a | 79 | A79del1 | Gcc | -cc | 3 | 3 | AY.23 | 0.000209 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | AY.24 | 0.001293 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | AY.24 | 0.001293 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 3 | AY.25 | 0.000012 |
ORF7a | 79 | A79del1 | gcC | gc- | 1 | 3 | AY.25 | 0.000006 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 3 | AY.27 | 0.000129 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 3 | AY.27 | 0.000065 |
ORF7a | 79 | A79del1 | Gcc | -cc | 3 | 3 | AY.3 | 0.00003 |
ORF7a | 79 | A79S | Gcc | Tcc | 3 | 3 | AY.3 | 0.00003 |
ORF7a | 79 | A79S | Gcc | Tcc | 3 | 3 | AY.32 | 0.001597 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | AY.33 | 0.0002 |
ORF7a | 79 | A79V | gCc | gTc | 3 | 3 | AY.39.1 | 0.000119 |
ORF7a | 79 | A79del1 | Gcc | -cc | 3 | 3 | AY.40 | 0.002893 |
ORF7a | 79 | A79T | Gcc | Acc | 3 | 3 | AY.43 | 0.000013 |
ORF7a | 79 | A79D | gCc | gAc | 3 | 3 | AY.44 | 0.000018 |
ORF7a | 79 | A79T | Gcc | Acc | 3 | 3 | AY.44 | 0.000018 |
ORF7a | 79 | A79D | gCc | gAc | 3 | 3 | AY.46.6 | 0.000217 |
ORF7a | 79 | A79V | gCc | gTc | 3 | 3 | AY.47 | 0.000093 |
ORF7a | 79 | A79D | gCc | gAc | 3 | 3 | AY.5.3 | 0.001012 |
ORF7a | 79 | A79S | Gcc | Tcc | 3 | 3 | AY.54 | 0.000286 |
ORF7a | 79 | A79S | Gcc | Tcc | 3 | 3 | AY.6 | 0.000123 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | AY.64 | 0.001786 |
ORF7a | 79 | A79del1 | Gcc | -cc | 3 | 3 | AY.84 | 0.001312 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | AY.85 | 0.001282 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | AY.88 | 0.002653 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 3 | AY.9 | 0.000135 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 3 | AY.9 | 0.000068 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | AY.92 | 0.000862 |
ORF7a | 79 | A79del1 | Gcc | -cc | 3 | 3 | AY.98.1 | 0.000145 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 3 | AY.98.1 | 0.000097 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 3 | AY.98.1 | 0.000048 |
ORF7a | 79 | A79V | gCc | gTc | 3 | 3 | AY.99.1 | 0.004658 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 3 | AY.99.2 | 0.000184 |
ORF7a | 79 | A79del1 | gcC | gc- | 1 | 3 | AY.99.2 | 0.000092 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 3 | B | 0.000256 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 3 | B | 0.000128 |
ORF7a | 79 | A79del1 | gCc | g-c | 2 | 3 | B.1 | 0.000018 |
ORF7a | 79 | A79del1 | GCc | -Tc | 1 | 3 | B.1 | 0.000009 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | B.1.1.121 | 0.007282 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.1.135 | 0.014085 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | B.1.1.37 | 0.000579 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.1.416 | 0.002715 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | B.1.160.16 | 0.002788 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.160.30 | 0.008929 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 3 | B.1.177.21 | 0.000153 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 3 | B.1.177.21 | 0.000076 |
ORF7a | 79 | A79V | gCc | gTc | 3 | 3 | B.1.177.32 | 0.004049 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.177.60 | 0.000655 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.177.87 | 0.002183 |
ORF7a | 79 | A79D | gCc | gAc | 3 | 3 | B.1.2 | 0.000026 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | B.1.258.17 | 0.000312 |
ORF7a | 79 | A79V | gCC | gTT | 3 | 3 | B.1.36.1 | 0.003421 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.36.18 | 0.001261 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.367 | 0.002377 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.438.1 | 0.000322 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | B.1.575 | 0.00091 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 3 | B.1.576 | 0.001813 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 3 | B.1.576 | 0.000907 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | B.1.581 | 0.028302 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | B.1.595 | 0.000783 |
ORF7a | 79 | A79V | gCc | gTc | 3 | 3 | B.1.620 | 0.002838 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | B.1.626 | 0.017143 |
ORF7a | 79 | A79A | gcC | gcA | 3 | 3 | C.12 | 0.021583 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | C.35 | 0.002322 |
ORF7a | 79 | A79del | GCC | --- | 3 | 3 | Q.1 | 0.000379 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | Q.6 | 0.019868 |
ORF7a | 79 | A79A | gcC | gcT | 3 | 3 | Q.8 | 0.000495 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 3 | R.1 | 0.00018 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 3 | R.1 | 0.00009 |
ORF7a | 79 | A79I | GCC | ATT | 2 | 2 | 0.111111 | |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | A.2.5 | 0.000998 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | A.23.1 | 0.001408 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | A.28 | 0.005291 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AD.2 | 0.000438 |
ORF7a | 79 | A79C | GCc | TGc | 2 | 2 | All | 0 |
ORF7a | 79 | A79F | GCc | TTc | 2 | 2 | All | 0 |
ORF7a | 79 | A79E | gCC | gAA | 1 | 2 | All | 0 |
ORF7a | 79 | A79E | gCC | gAG | 1 | 2 | All | 0 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.1 | 0.000791 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.10 | 0.00106 |
ORF7a | 79 | A79T | Gcc | Acc | 2 | 2 | AY.100 | 0.000092 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.100 | 0.000092 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | AY.100 | 0.000092 |
ORF7a | 79 | A79T | Gcc | Acc | 2 | 2 | AY.103 | 0.000012 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | AY.106 | 0.00067 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.106 | 0.00067 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.108 | 0.002205 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.109 | 0.001479 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.113 | 0.000285 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 2 | AY.114 | 0.000462 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.116.1 | 0.000623 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.117 | 0.000169 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.117 | 0.000169 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | AY.119 | 0.000071 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.12 | 0.000632 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.121 | 0.000271 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.19 | 0.002281 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.19 | 0.002281 |
ORF7a | 79 | A79del2 | GCc | --c | 2 | 2 | AY.20 | 0.000078 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.23.1 | 0.000835 |
ORF7a | 79 | A79del2 | gCC | g-- | 2 | 2 | AY.25 | 0.000012 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.27 | 0.000129 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.29 | 0.000032 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | AY.29 | 0.000032 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.32 | 0.001065 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.32 | 0.001065 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.33 | 0.000134 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | AY.33 | 0.000134 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.34.1 | 0.00102 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.34.1 | 0.00102 |
ORF7a | 79 | A79T | Gcc | Acc | 2 | 2 | AY.39 | 0.000049 |
ORF7a | 79 | A79G | gCc | gGc | 1 | 2 | AY.4 | 0.000002 |
ORF7a | 79 | A79G | gCC | gGA | 1 | 2 | AY.4 | 0.000002 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.4.1 | 0.001475 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | AY.4.2 | 0.000043 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.4.4 | 0.000818 |
ORF7a | 79 | A79P | Gcc | Ccc | 2 | 2 | AY.42 | 0.00008 |
ORF7a | 79 | A79T | Gcc | Acc | 2 | 2 | AY.42 | 0.00008 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.46 | 0.000208 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.46 | 0.000208 |
ORF7a | 79 | A79del2 | GCc | --c | 2 | 2 | AY.46 | 0.000208 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.46.2 | 0.001271 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | AY.46.4 | 0.000329 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | AY.46.5 | 0.000397 |
ORF7a | 79 | A79T | Gcc | Acc | 2 | 2 | AY.47 | 0.000062 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.48 | 0.00093 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.49 | 0.00639 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.5 | 0.000041 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.5.3 | 0.000675 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.53 | 0.000575 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.63 | 0.000774 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.64 | 0.00119 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.65 | 0.001066 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.66 | 0.002139 |
ORF7a | 79 | A79del1 | GCc | -Ac | 2 | 2 | AY.7.2 | 0.001119 |
ORF7a | 79 | A79Y | GCc | TAc | 2 | 2 | AY.7.2 | 0.001119 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 2 | AY.77 | 0.001127 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 2 | AY.77 | 0.001127 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | AY.78 | 0.003082 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | AY.86 | 0.00166 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | AY.87 | 0.001665 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.87 | 0.001665 |
ORF7a | 79 | A79del1 | Gcc | -cc | 2 | 2 | AY.88 | 0.001768 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.9.1 | 0.000167 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | AY.9.2 | 0.000073 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.91 | 0.001461 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.92 | 0.000575 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.98 | 0.000158 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | AY.99 | 0.002099 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | AY.99.1 | 0.003106 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B | 0.000256 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | B.1 | 0.000018 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.10 | 0.00223 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.1.101 | 0.02 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.1.170 | 0.002494 |
ORF7a | 79 | A79T | Gcc | Acc | 2 | 2 | B.1.1.180 | 0.021505 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.1.220 | 0.003717 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.1.25 | 0.001137 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.253 | 0.005013 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.269 | 0.002706 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.389 | 0.012121 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | B.1.1.39 | 0.001019 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.407 | 0.083333 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.464 | 0.002946 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.1.521 | 0.010695 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 2 | B.1.1.523 | 0.003125 |
ORF7a | 79 | A79P | Gcc | Ccc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.1.72 | 0.060606 |
ORF7a | 79 | A79T | Gcc | Acc | 2 | 2 | B.1.160 | 0.000062 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.177.15 | 0.001262 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.177.23 | 0.006472 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF7a | 79 | A79del2 | GCc | --c | 2 | 2 | B.1.177.4 | 0.000422 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.177.55 | 0.004662 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.177.55 | 0.004662 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.177.57 | 0.000562 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.177.57 | 0.000562 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.177.60 | 0.000437 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.177.7 | 0.00033 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | B.1.177.77 | 0.001452 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.177.81 | 0.000379 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.177.86 | 0.000367 |
ORF7a | 79 | A79del2 | GCc | --c | 2 | 2 | B.1.2 | 0.000018 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 2 | B.1.206 | 0.000816 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 2 | B.1.206 | 0.000816 |
ORF7a | 79 | A79A | gcC | gcA | 2 | 2 | B.1.214.2 | 0.001199 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF7a | 79 | A79P | Gcc | Ccc | 2 | 2 | B.1.221.4 | 0.008333 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.240 | 0.000431 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | B.1.243 | 0.000139 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.258.11 | 0.000793 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.258.11 | 0.000793 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.258.14 | 0.001961 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.320 | 0.002491 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.336 | 0.004878 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.349 | 0.00143 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.36.38 | 0.003284 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | B.1.411 | 0.007407 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.416.1 | 0.003125 |
ORF7a | 79 | A79S | Gcc | Tcc | 2 | 2 | B.1.429 | 0.000047 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF7a | 79 | A79E | gCC | gAG | 1 | 2 | B.1.497 | 0.000315 |
ORF7a | 79 | A79E | gCC | gAA | 1 | 2 | B.1.497 | 0.000315 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.499 | 0.002101 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.517 | 0.000854 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.517.1 | 0.010526 |
ORF7a | 79 | A79D | gCc | gAc | 2 | 2 | B.1.525 | 0.000226 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | B.1.564 | 0.000852 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 2 | B.1.617.2 | 0.000004 |
ORF7a | 79 | A79del2 | gCC | g-- | 1 | 2 | B.1.617.2 | 0.000004 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | B.1.621.1 | 0.001012 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | B.6 | 0.00182 |
ORF7a | 79 | A79del1 | gcC | gc- | 1 | 2 | C.37 | 0.000116 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 2 | C.37 | 0.000116 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 2 | D.2 | 0.000075 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 2 | D.2 | 0.000075 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | P.1.10 | 0.000539 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | P.1.12 | 0.000968 |
ORF7a | 79 | A79del2 | GCc | --c | 2 | 2 | P.1.14 | 0.000096 |
ORF7a | 79 | A79V | gCc | gTc | 2 | 2 | P.1.14 | 0.000096 |
ORF7a | 79 | A79del | GCC | --- | 2 | 2 | P.1.14 | 0.000096 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | P.1.17 | 0.000324 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | P.1.9 | 0.009615 |
ORF7a | 79 | A79A | gcC | gcT | 2 | 2 | Q.1 | 0.000253 |
ORF7a | 79 | A79del2 | gCC | g-- | 1 | 2 | Q.8 | 0.000165 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 2 | Q.8 | 0.000165 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | A | 0.000387 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | A.1 | 0.000282 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | A.1 | 0.000282 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | A.19 | 0.009434 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | A.19 | 0.009434 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | A.2 | 0.000662 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | A.2.2 | 0.001689 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | A.2.5 | 0.000499 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | A.23 | 0.010526 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | A.23.1 | 0.000704 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | A.28 | 0.002646 |
ORF7a | 79 | A79W | GCC | TGG | 1 | 1 | All | 0 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AP.1 | 0.001502 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AS.2 | 0.015625 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AU.3 | 0.00211 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.10 | 0.00053 |
ORF7a | 79 | A79C | GCc | TGc | 1 | 1 | AY.100 | 0.000046 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.100 | 0.000046 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.100 | 0.000046 |
ORF7a | 79 | A79G | gCc | gGc | 1 | 1 | AY.100 | 0.000046 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.102 | 0.000027 |
ORF7a | 79 | A79del2 | gCC | g-- | 1 | 1 | AY.103 | 0.000006 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.104 | 0.001984 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.106 | 0.000335 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.107 | 0.000466 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.108 | 0.001103 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.108 | 0.001103 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.109 | 0.00074 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.11 | 0.001339 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.110 | 0.000113 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.111 | 0.000183 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.111 | 0.000183 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.114 | 0.000231 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.114 | 0.000231 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.116 | 0.000287 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.116 | 0.000287 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.116.1 | 0.000311 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | AY.117 | 0.000085 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | AY.118 | 0.000063 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.12 | 0.000316 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 79 | A79G | gCC | gGA | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 79 | A79Y | GCC | TAT | 1 | 1 | AY.120.1 | 0.000321 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.120.1 | 0.000321 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | AY.120.1 | 0.000321 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.13 | 0.000161 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.13 | 0.000161 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.14 | 0.000088 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.16 | 0.00038 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.16 | 0.00038 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.17 | 0.008197 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.20 | 0.000039 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | AY.20 | 0.000039 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.22 | 0.002092 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.22 | 0.002092 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.25 | 0.000006 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.26 | 0.000028 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 1 | AY.26 | 0.000028 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.26 | 0.000028 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.27 | 0.000065 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.29 | 0.000016 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 1 | AY.3 | 0.00001 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.30 | 0.000396 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.32 | 0.000532 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.33 | 0.000067 |
ORF7a | 79 | A79del2 | gCC | g-- | 1 | 1 | AY.34 | 0.000097 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | AY.34.1 | 0.00051 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | AY.35 | 0.000233 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.36 | 0.000148 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.36 | 0.000148 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.37 | 0.000316 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.37 | 0.000316 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 1 | AY.39.1 | 0.00004 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.4.1 | 0.000737 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.4.2 | 0.000022 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | AY.4.3 | 0.000842 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.4.3 | 0.000842 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.4.4 | 0.000409 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.41 | 0.000294 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.42 | 0.00004 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.42 | 0.00004 |
ORF7a | 79 | A79del2 | GCC | --N | 1 | 1 | AY.43 | 0.000004 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.46 | 0.000104 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.46.2 | 0.000635 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.46.3 | 0.000934 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.46.4 | 0.000165 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.46.5 | 0.000198 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.48 | 0.000465 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.48 | 0.000465 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.5 | 0.000021 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.5.1 | 0.003759 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.5.4 | 0.000277 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.52 | 0.000814 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | AY.52 | 0.000814 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.53 | 0.000288 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.53 | 0.000288 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.53 | 0.000288 |
ORF7a | 79 | A79T | GcC | AcG | 1 | 1 | AY.54 | 0.000095 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.56 | 0.001605 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.58 | 0.000907 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.6 | 0.000041 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.6 | 0.000041 |
ORF7a | 79 | A79P | GcC | CcA | 1 | 1 | AY.61 | 0.000105 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.62 | 0.000436 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.63 | 0.000387 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.65 | 0.000533 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.65 | 0.000533 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.66 | 0.00107 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.68 | 0.000274 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.68 | 0.000274 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.69 | 0.000187 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.69 | 0.000187 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | AY.7 | 0.000196 |
ORF7a | 79 | A79Y | GCc | TAc | 1 | 1 | AY.7 | 0.000196 |
ORF7a | 79 | A79del1 | GCc | -Ac | 1 | 1 | AY.7 | 0.000196 |
ORF7a | 79 | A79Y | GCc | TAc | 1 | 1 | AY.7.1 | 0.000113 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.70 | 0.000209 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.73 | 0.000665 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.73 | 0.000665 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | AY.75 | 0.000056 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | AY.75 | 0.000056 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.75 | 0.000056 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.78 | 0.001541 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.79 | 0.001211 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.81 | 0.001992 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.82 | 0.001357 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.84 | 0.000437 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.84 | 0.000437 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.85 | 0.000427 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.85 | 0.000427 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.85 | 0.000427 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.86 | 0.00083 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.86 | 0.00083 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.87 | 0.000833 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.88 | 0.000884 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | AY.89 | 0.004902 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.9 | 0.000068 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.9 | 0.000068 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.9.1 | 0.000084 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.9.1 | 0.000084 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.9.1 | 0.000084 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.90 | 0.000684 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.90 | 0.000684 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.91 | 0.00073 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.93 | 0.000273 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AY.94 | 0.000443 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AY.95 | 0.000761 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.95 | 0.000761 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | AY.95 | 0.000761 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | AY.95 | 0.000761 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 79 | A79del2 | gCC | g-- | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 1 | AY.98.1 | 0.000048 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | AY.98.1 | 0.000048 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | AY.99 | 0.001049 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | AZ.1 | 0.000867 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | AZ.2 | 0.000821 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B | 0.000128 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | B | 0.000128 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | B.1 | 0.000009 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | B.1 | 0.000009 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 1 | B.1 | 0.000009 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.121 | 0.002427 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 1 | B.1.1.135 | 0.004695 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.157 | 0.000913 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.176 | 0.000439 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.194 | 0.00495 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.196 | 0.005714 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.198 | 0.001468 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.205 | 0.003717 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.219 | 0.005 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.1.220 | 0.001859 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.258 | 0.003257 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.265 | 0.003155 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.1.27 | 0.00565 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.272 | 0.005208 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.277 | 0.000759 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.1.282 | 0.011628 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.291 | 0.000742 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.1.297 | 0.002237 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.301 | 0.001179 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.302 | 0.002075 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.303 | 0.002762 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.1.305 | 0.003861 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.306 | 0.000438 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.309 | 0.005848 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.315 | 0.008475 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.1.317 | 0.000412 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.317 | 0.000412 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.318 | 0.000302 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.326 | 0.001761 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.326 | 0.001761 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.336 | 0.016667 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.344 | 0.010753 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.1.358 | 0.034483 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.366 | 0.015873 |
ORF7a | 79 | A79del2 | GCc | --c | 1 | 1 | B.1.1.37 | 0.000193 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.1.375 | 0.011905 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.1.398 | 0.003226 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.404 | 0.015873 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.1.41 | 0.006329 |
ORF7a | 79 | A79G | gCc | gGc | 1 | 1 | B.1.1.411 | 0.014706 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.1.432 | 0.001266 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.434 | 0.000349 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.437 | 0.010417 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.448 | 0.002033 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.525 | 0.005464 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF7a | 79 | A79F | GCc | TTc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7a | 79 | A79N | GCC | AAT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.1.70 | 0.000341 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.115 | 0.021739 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 1 | B.1.159 | 0.012195 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.160 | 0.000031 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.160 | 0.000031 |
ORF7a | 79 | A79W | GCC | TGG | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.177.10 | 0.000878 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.177.15 | 0.000631 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.177.20 | 0.001517 |
ORF7a | 79 | A79N | GCc | AAc | 1 | 1 | B.1.177.21 | 0.000076 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.177.21 | 0.000076 |
ORF7a | 79 | A79I | GCC | ATA | 1 | 1 | B.1.177.21 | 0.000076 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.177.31 | 0.011494 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.177.4 | 0.000211 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.177.43 | 0.001477 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.177.5 | 0.001242 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | B.1.177.57 | 0.000281 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.177.6 | 0.000977 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF7a | 79 | A79V | gCC | gTA | 1 | 1 | B.1.177.63 | 0.002703 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.177.77 | 0.000726 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.177.81 | 0.000189 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.177.86 | 0.000183 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | B.1.221 | 0.000071 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.221 | 0.000071 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.221.1 | 0.002907 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.221.2 | 0.004016 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.23 | 0.006061 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | B.1.234 | 0.000132 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.236 | 0.002053 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.236 | 0.002053 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.236 | 0.002053 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.240 | 0.000216 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.242 | 0.018868 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | B.1.243 | 0.00007 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.252 | 0.006623 |
ORF7a | 79 | A79N | GCC | AAT | 1 | 1 | B.1.258.9 | 0.005 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.265 | 0.001271 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.3 | 0.002618 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.301 | 0.005917 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.305 | 0.002151 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.311 | 0.000275 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.311 | 0.000275 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.319 | 0.003049 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.333 | 0.010526 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.349 | 0.000715 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.351.3 | 0.000876 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.36 | 0.000146 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.36.10 | 0.004785 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.36.16 | 0.001425 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.36.17 | 0.000494 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.36.24 | 0.006173 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.36.31 | 0.001751 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.36.31 | 0.001751 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.36.9 | 0.003215 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.362 | 0.001541 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.362 | 0.001541 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.371 | 0.001122 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.380 | 0.006623 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.395 | 0.007042 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.396 | 0.000706 |
ORF7a | 79 | A79del1 | gCc | g-c | 1 | 1 | B.1.399 | 0.001934 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.400 | 0.000429 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.405 | 0.012346 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.406 | 0.006061 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.409 | 0.000781 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | B.1.416 | 0.001269 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | B.1.416.1 | 0.001563 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF7a | 79 | A79P | Gcc | Ccc | 1 | 1 | B.1.416.1 | 0.001563 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.422 | 0.000812 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | B.1.429 | 0.000024 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.438 | 0.006536 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.444 | 0.015873 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.446 | 0.02 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.456 | 0.003268 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.459 | 0.004082 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.466.2 | 0.000391 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.469 | 0.00361 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.497 | 0.000315 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.498 | 0.020408 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.509 | 0.000866 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.509 | 0.000866 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.509 | 0.000866 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.524 | 0.001406 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | B.1.525 | 0.000113 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.527 | 0.003704 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.535 | 0.028571 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.540 | 0.009709 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.560 | 0.00463 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.564.1 | 0.001577 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | B.1.564.1 | 0.001577 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.568 | 0.001111 |
ORF7a | 79 | A79A | gcC | gcG | 1 | 1 | B.1.575 | 0.000303 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.580 | 0.004065 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.585 | 0.027778 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.588 | 0.00091 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.596 | 0.000087 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.1.596 | 0.000087 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.598 | 0.016949 |
ORF7a | 79 | A79C | GCc | TGc | 1 | 1 | B.1.609 | 0.000479 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF7a | 79 | A79F | GCc | TTc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 79 | A79A | gcC | gcA | 1 | 1 | B.1.628 | 0.000352 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.628 | 0.000352 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.628 | 0.000352 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | B.1.630 | 0.005236 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.88.1 | 0.004808 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.9.1 | 0.032258 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | B.1.93 | 0.000934 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.1.93 | 0.000934 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.40 | 0.000364 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | B.6 | 0.00091 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | B.6.6 | 0.000889 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | C.1 | 0.002392 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | C.1.2 | 0.004255 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | C.1.2 | 0.004255 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | C.36 | 0.000911 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | C.36.3 | 0.000567 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | C.37 | 0.000116 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | D.2 | 0.000075 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | N.5 | 0.001767 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | N.5 | 0.001767 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | P.1 | 0.000016 |
ORF7a | 79 | A79D | gCc | gAc | 1 | 1 | P.1 | 0.000016 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | P.1 | 0.000016 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | P.1.1 | 0.000318 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | P.1.1 | 0.000318 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | P.1.12 | 0.000484 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | P.1.13 | 0.000898 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | P.1.16 | 0.000374 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 79 | A79T | Gcc | Acc | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 79 | A79V | gCC | gTT | 1 | 1 | P.1.17.1 | 0.000875 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | P.1.2 | 0.001156 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | P.1.3 | 0.034483 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | P.2 | 0.000187 |
ORF7a | 79 | A79del | GCC | --- | 1 | 1 | Q.7 | 0.001111 |
ORF7a | 79 | A79del1 | Gcc | -cc | 1 | 1 | Q.8 | 0.000165 |
ORF7a | 79 | A79S | Gcc | Tcc | 1 | 1 | R.1 | 0.00009 |
ORF7a | 79 | A79V | gCc | gTc | 1 | 1 | R.1 | 0.00009 |
ORF7a | 79 | A79A | gcC | gcT | 1 | 1 | U.3 | 0.003861 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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