CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF7a | 71 | V71I | nonsyn | Gta | Ata | 55663 | 55662 | 0.999982 | 27604-27606 | |
ORF7a | 71 | V71I | nonsyn | GtA | AtT | 55663 | 1 | 0.0000179653 | 27604-27606 | |
ORF7a | 71 | V71del | del | GTA | --- | 29849 | 29849 | 1 | 27604-27606 | |
ORF7a | 71 | V71L | nonsyn | Gta | Tta | 1441 | 1412 | 0.979875 | 27604-27606 | |
ORF7a | 71 | V71L | nonsyn | Gta | Cta | 1441 | 26 | 0.018043 | 27604-27606 | |
ORF7a | 71 | V71L | nonsyn | GtA | TtG | 1441 | 1 | 0.000693963 | 27604-27606 | |
ORF7a | 71 | V71L | nonsyn | GtA | CtT | 1441 | 1 | 0.000693963 | 27604-27606 | |
ORF7a | 71 | V71L | nonsyn | GtA | CtG | 1441 | 1 | 0.000693963 | 27604-27606 | |
ORF7a | 71 | V71del2 | del | GTa | --a | 682 | 363 | 0.532258 | 27604-27606 | |
ORF7a | 71 | V71del2 | del | gTA | g-- | 682 | 269 | 0.394428 | 27604-27606 | |
ORF7a | 71 | V71del2 | del | GTA | A-- | 682 | 48 | 0.0703812 | 27604-27606 | |
ORF7a | 71 | V71del2 | del | GTA | --N | 682 | 2 | 0.00293255 | 27604-27606 | |
ORF7a | 71 | V71V | syn | gtA | gtG | 416 | 311 | 0.747596 | 27604-27606 | |
ORF7a | 71 | V71V | syn | gtA | gtT | 416 | 83 | 0.199519 | 27604-27606 | |
ORF7a | 71 | V71V | syn | gtA | gtC | 416 | 22 | 0.0528846 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | Gta | -ta | 272 | 150 | 0.551471 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | gtA | gt- | 272 | 96 | 0.352941 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | GtA | At- | 272 | 10 | 0.0367647 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | GTA | -NN | 272 | 6 | 0.0220588 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | GtA | -tN | 272 | 4 | 0.0147059 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | GTa | -Aa | 272 | 2 | 0.00735294 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | GtA | -tT | 272 | 1 | 0.00367647 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | GtA | Nt- | 272 | 1 | 0.00367647 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | GtA | -tG | 272 | 1 | 0.00367647 | 27604-27606 | |
ORF7a | 71 | V71del1 | del | gTa | g-a | 272 | 1 | 0.00367647 | 27604-27606 | |
ORF7a | 71 | V71A | nonsyn | gTa | gCa | 179 | 178 | 0.994413 | 27604-27606 | |
ORF7a | 71 | V71A | nonsyn | gTA | gCT | 179 | 1 | 0.00558659 | 27604-27606 | |
ORF7a | 71 | V71T | nonsyn | GTa | ACa | 51 | 50 | 0.980392 | 27604-27606 | |
ORF7a | 71 | V71T | nonsyn | GTA | ACG | 51 | 1 | 0.0196078 | 27604-27606 | |
ORF7a | 71 | V71F | nonsyn | GtA | TtT | 21 | 20 | 0.952381 | 27604-27606 | |
ORF7a | 71 | V71F | nonsyn | GtA | TtC | 21 | 1 | 0.047619 | 27604-27606 | |
ORF7a | 71 | V71E | nonsyn | gTa | gAa | 14 | 11 | 0.785714 | 27604-27606 | |
ORF7a | 71 | V71E | nonsyn | gTA | gAG | 14 | 3 | 0.214286 | 27604-27606 | |
ORF7a | 71 | V71K | nonsyn | GTa | AAa | 11 | 10 | 0.909091 | 27604-27606 | |
ORF7a | 71 | V71K | nonsyn | GTA | AAG | 11 | 1 | 0.0909091 | 27604-27606 | |
ORF7a | 71 | V71G | nonsyn | gTa | gGa | 10 | 7 | 0.7 | 27604-27606 | |
ORF7a | 71 | V71G | nonsyn | gTA | gGG | 10 | 2 | 0.2 | 27604-27606 | |
ORF7a | 71 | V71G | nonsyn | gTA | gGT | 10 | 1 | 0.1 | 27604-27606 | |
ORF7a | 71 | V71R | nonsyn | GTa | CGa | 4 | 2 | 0.5 | 27604-27606 | |
ORF7a | 71 | V71R | nonsyn | GTA | AGG | 4 | 1 | 0.25 | 27604-27606 | |
ORF7a | 71 | V71R | nonsyn | GTA | CGT | 4 | 1 | 0.25 | 27604-27606 | |
ORF7a | 71 | V71X | nonsyn | GTa | TAa | 3 | 3 | 1 | 27604-27606 | |
ORF7a | 71 | V71N | nonsyn | GTA | AAT | 2 | 2 | 1 | 27604-27606 | |
ORF7a | 71 | V71S | nonsyn | GTa | TCa | 2 | 2 | 1 | 27604-27606 | |
ORF7a | 71 | V71Q | nonsyn | GTa | CAa | 1 | 1 | 1 | 27604-27606 | |
ORF7a | 71 | V71M | nonsyn | GtA | AtG | 1 | 1 | 1 | 27604-27606 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF7a | 71 | V71I | Gta | Ata | 55662 | 55663 | All | 0.010646 |
ORF7a | 71 | V71I | GtA | AtT | 1 | 55663 | All | 0 |
ORF7a | 71 | V71del | GTA | --- | 29849 | 29849 | All | 0.005709 |
ORF7a | 71 | V71I | Gta | Ata | 24210 | 24210 | AY.39.1 | 0.95904 |
ORF7a | 71 | V71I | Gta | Ata | 23211 | 23211 | AY.39 | 0.573578 |
ORF7a | 71 | V71del | GTA | --- | 12247 | 12247 | AY.4 | 0.019062 |
ORF7a | 71 | V71I | Gta | Ata | 4495 | 4495 | B.1.617.2 | 0.016926 |
ORF7a | 71 | V71del | GTA | --- | 2689 | 2689 | B.1.617.2 | 0.010125 |
ORF7a | 71 | V71del | GTA | --- | 2536 | 2536 | AY.44 | 0.015436 |
ORF7a | 71 | V71del | GTA | --- | 2281 | 2281 | B.1.1.7 | 0.002042 |
ORF7a | 71 | V71L | Gta | Tta | 1412 | 1441 | All | 0.00027 |
ORF7a | 71 | V71L | Gta | Cta | 26 | 1441 | All | 0.000005 |
ORF7a | 71 | V71L | GtA | CtT | 1 | 1441 | All | 0 |
ORF7a | 71 | V71L | GtA | CtG | 1 | 1441 | All | 0 |
ORF7a | 71 | V71L | GtA | TtG | 1 | 1441 | All | 0 |
ORF7a | 71 | V71I | Gta | Ata | 1317 | 1317 | AY.39.1.1 | 0.954348 |
ORF7a | 71 | V71del | GTA | --- | 1170 | 1170 | AY.43 | 0.005184 |
ORF7a | 71 | V71del | GTA | --- | 752 | 752 | AY.25 | 0.004523 |
ORF7a | 71 | V71del2 | GTa | --a | 363 | 682 | All | 0.000069 |
ORF7a | 71 | V71del2 | gTA | g-- | 269 | 682 | All | 0.000051 |
ORF7a | 71 | V71del2 | GTA | A-- | 48 | 682 | All | 0.000009 |
ORF7a | 71 | V71del2 | GTA | --N | 2 | 682 | All | 0 |
ORF7a | 71 | V71del | GTA | --- | 641 | 641 | AY.103 | 0.00398 |
ORF7a | 71 | V71I | Gta | Ata | 602 | 602 | AY.39.2 | 0.927581 |
ORF7a | 71 | V71del | GTA | --- | 573 | 573 | AY.3 | 0.005699 |
ORF7a | 71 | V71del | GTA | --- | 549 | 549 | AY.120 | 0.020411 |
ORF7a | 71 | V71del | GTA | --- | 481 | 481 | AY.4.2 | 0.010432 |
ORF7a | 71 | V71del | GTA | --- | 455 | 455 | AY.3.1 | 0.038793 |
ORF7a | 71 | V71del | GTA | --- | 428 | 428 | AY.39 | 0.010577 |
ORF7a | 71 | V71V | gtA | gtG | 311 | 416 | All | 0.000059 |
ORF7a | 71 | V71V | gtA | gtT | 83 | 416 | All | 0.000016 |
ORF7a | 71 | V71V | gtA | gtC | 22 | 416 | All | 0.000004 |
ORF7a | 71 | V71del | GTA | --- | 397 | 397 | AY.26 | 0.011239 |
ORF7a | 71 | V71I | Gta | Ata | 275 | 275 | AY.5.2 | 0.67734 |
ORF7a | 71 | V71del1 | Gta | -ta | 150 | 272 | All | 0.000029 |
ORF7a | 71 | V71del1 | gtA | gt- | 96 | 272 | All | 0.000018 |
ORF7a | 71 | V71del1 | GtA | At- | 10 | 272 | All | 0.000002 |
ORF7a | 71 | V71del1 | GTA | -NN | 6 | 272 | All | 0.000001 |
ORF7a | 71 | V71del1 | GtA | -tN | 4 | 272 | All | 0.000001 |
ORF7a | 71 | V71del1 | GTa | -Aa | 2 | 272 | All | 0 |
ORF7a | 71 | V71del1 | GtA | -tT | 1 | 272 | All | 0 |
ORF7a | 71 | V71del1 | gTa | g-a | 1 | 272 | All | 0 |
ORF7a | 71 | V71del1 | GtA | Nt- | 1 | 272 | All | 0 |
ORF7a | 71 | V71del1 | GtA | -tG | 1 | 272 | All | 0 |
ORF7a | 71 | V71del | GTA | --- | 255 | 255 | AY.102 | 0.006761 |
ORF7a | 71 | V71del | GTA | --- | 229 | 229 | AY.29 | 0.003612 |
ORF7a | 71 | V71L | Gta | Tta | 211 | 211 | AY.120 | 0.007845 |
ORF7a | 71 | V71del | GTA | --- | 206 | 206 | B.1.351 | 0.006124 |
ORF7a | 71 | V71L | Gta | Tta | 197 | 205 | B.1.1.7 | 0.000176 |
ORF7a | 71 | V71L | Gta | Cta | 8 | 205 | B.1.1.7 | 0.000007 |
ORF7a | 71 | V71L | Gta | Tta | 190 | 190 | AY.26 | 0.005379 |
ORF7a | 71 | V71del | GTA | --- | 183 | 183 | B.1.177.21 | 0.013994 |
ORF7a | 71 | V71A | gTa | gCa | 178 | 179 | All | 0.000034 |
ORF7a | 71 | V71A | gTA | gCT | 1 | 179 | All | 0 |
ORF7a | 71 | V71I | Gta | Ata | 170 | 171 | B.1.1.7 | 0.000152 |
ORF7a | 71 | V71I | GtA | AtT | 1 | 171 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71L | Gta | Tta | 161 | 161 | A.29 | 0.856383 |
ORF7a | 71 | V71del | GTA | --- | 147 | 147 | B.1.526 | 0.003455 |
ORF7a | 71 | V71I | Gta | Ata | 139 | 139 | AY.4 | 0.000216 |
ORF7a | 71 | V71del | GTA | --- | 136 | 136 | AY.100 | 0.006257 |
ORF7a | 71 | V71del | GTA | --- | 119 | 119 | B.1.2 | 0.001048 |
ORF7a | 71 | V71del2 | GTa | --a | 79 | 116 | AY.4 | 0.000123 |
ORF7a | 71 | V71del2 | gTA | g-- | 37 | 116 | AY.4 | 0.000058 |
ORF7a | 71 | V71del | GTA | --- | 108 | 108 | B.1.177 | 0.001422 |
ORF7a | 71 | V71del | GTA | --- | 107 | 107 | AY.6 | 0.004401 |
ORF7a | 71 | V71del | GTA | --- | 102 | 102 | AY.47 | 0.003173 |
ORF7a | 71 | V71del | GTA | --- | 100 | 100 | AY.119 | 0.003531 |
ORF7a | 71 | V71del | GTA | --- | 93 | 93 | AY.98 | 0.007347 |
ORF7a | 71 | V71del | GTA | --- | 92 | 92 | B.1 | 0.000843 |
ORF7a | 71 | V71I | Gta | Ata | 88 | 88 | AY.16 | 0.033409 |
ORF7a | 71 | V71del | GTA | --- | 87 | 87 | AY.46.4 | 0.014312 |
ORF7a | 71 | V71del | GTA | --- | 85 | 85 | AY.5 | 0.001755 |
ORF7a | 71 | V71V | gtA | gtG | 78 | 82 | B.1.617.2 | 0.000294 |
ORF7a | 71 | V71V | gtA | gtT | 4 | 82 | B.1.617.2 | 0.000015 |
ORF7a | 71 | V71I | Gta | Ata | 78 | 78 | AY.25 | 0.000469 |
ORF7a | 71 | V71I | Gta | Ata | 74 | 74 | AY.103 | 0.000459 |
ORF7a | 71 | V71del | GTA | --- | 74 | 74 | P.1 | 0.001166 |
ORF7a | 71 | V71L | Gta | Tta | 73 | 73 | B.1.1.519 | 0.002899 |
ORF7a | 71 | V71I | Gta | Ata | 72 | 72 | AY.43 | 0.000319 |
ORF7a | 71 | V71del2 | GTa | --a | 71 | 72 | AY.46.6 | 0.005127 |
ORF7a | 71 | V71del2 | GTA | --N | 1 | 72 | AY.46.6 | 0.000072 |
ORF7a | 71 | V71del2 | GTa | --a | 65 | 67 | AY.25 | 0.000391 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 67 | AY.25 | 0.000006 |
ORF7a | 71 | V71del2 | GTA | --N | 1 | 67 | AY.25 | 0.000006 |
ORF7a | 71 | V71del | GTA | --- | 64 | 64 | AY.20 | 0.002487 |
ORF7a | 71 | V71L | Gta | Tta | 61 | 64 | AY.4 | 0.000095 |
ORF7a | 71 | V71L | Gta | Cta | 3 | 64 | AY.4 | 0.000005 |
ORF7a | 71 | V71del | GTA | --- | 64 | 64 | AY.75 | 0.003585 |
ORF7a | 71 | V71del | GTA | --- | 64 | 64 | B.1.621 | 0.005665 |
ORF7a | 71 | V71del | GTA | --- | 62 | 62 | AY.113 | 0.008828 |
ORF7a | 71 | V71V | gtA | gtG | 61 | 62 | AY.4 | 0.000095 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 62 | AY.4 | 0.000002 |
ORF7a | 71 | V71I | Gta | Ata | 61 | 61 | AY.98 | 0.004819 |
ORF7a | 71 | V71del | GTA | --- | 59 | 59 | AY.9.1 | 0.00494 |
ORF7a | 71 | V71L | Gta | Tta | 56 | 58 | B.1.617.2 | 0.000211 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 58 | B.1.617.2 | 0.000004 |
ORF7a | 71 | V71L | GtA | CtG | 1 | 58 | B.1.617.2 | 0.000004 |
ORF7a | 71 | V71del | GTA | --- | 56 | 56 | AY.42 | 0.002253 |
ORF7a | 71 | V71del | GTA | --- | 55 | 55 | AY.39.1 | 0.002179 |
ORF7a | 71 | V71I | Gta | Ata | 55 | 55 | B.1.36.18 | 0.023109 |
ORF7a | 71 | V71del2 | gTA | g-- | 54 | 54 | AY.42 | 0.002172 |
ORF7a | 71 | V71del | GTA | --- | 53 | 53 | AY.23 | 0.003697 |
ORF7a | 71 | V71del1 | Gta | -ta | 52 | 53 | AY.6 | 0.002139 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 53 | AY.6 | 0.000041 |
ORF7a | 71 | V71T | GTa | ACa | 50 | 51 | All | 0.00001 |
ORF7a | 71 | V71T | GTA | ACG | 1 | 51 | All | 0 |
ORF7a | 71 | V71I | Gta | Ata | 49 | 49 | AY.44 | 0.000298 |
ORF7a | 71 | V71del | GTA | --- | 49 | 49 | B.1.429 | 0.001153 |
ORF7a | 71 | V71del2 | gTA | g-- | 24 | 48 | AY.44 | 0.000146 |
ORF7a | 71 | V71del2 | GTa | --a | 24 | 48 | AY.44 | 0.000146 |
ORF7a | 71 | V71del | GTA | --- | 47 | 47 | AY.117 | 0.003972 |
ORF7a | 71 | V71del | GTA | --- | 47 | 47 | AY.33 | 0.003139 |
ORF7a | 71 | V71del2 | GTA | A-- | 30 | 47 | AY.39 | 0.000741 |
ORF7a | 71 | V71del2 | GTa | --a | 9 | 47 | AY.39 | 0.000222 |
ORF7a | 71 | V71del2 | gTA | g-- | 8 | 47 | AY.39 | 0.000198 |
ORF7a | 71 | V71T | GTa | ACa | 47 | 47 | AY.39.1 | 0.001862 |
ORF7a | 71 | V71del | GTA | --- | 47 | 47 | B.1.1.284 | 0.005048 |
ORF7a | 71 | V71del | GTA | --- | 46 | 46 | AY.46 | 0.004788 |
ORF7a | 71 | V71del | GTA | --- | 46 | 46 | AY.68 | 0.012592 |
ORF7a | 71 | V71L | Gta | Tta | 46 | 46 | P.1 | 0.000725 |
ORF7a | 71 | V71del | GTA | --- | 45 | 45 | AY.46.6 | 0.003249 |
ORF7a | 71 | V71del | GTA | --- | 43 | 43 | AY.86 | 0.035685 |
ORF7a | 71 | V71L | Gta | Tta | 41 | 42 | AY.25 | 0.000247 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 42 | AY.25 | 0.000006 |
ORF7a | 71 | V71A | gTa | gCa | 42 | 42 | B.1.1.7 | 0.000038 |
ORF7a | 71 | V71del1 | Gta | -ta | 40 | 41 | AY.25 | 0.000241 |
ORF7a | 71 | V71del1 | GTA | -NN | 1 | 41 | AY.25 | 0.000006 |
ORF7a | 71 | V71del2 | gTA | g-- | 32 | 41 | AY.3 | 0.000318 |
ORF7a | 71 | V71del2 | GTa | --a | 9 | 41 | AY.3 | 0.00009 |
ORF7a | 71 | V71del | GTA | --- | 41 | 41 | AY.61 | 0.004296 |
ORF7a | 71 | V71del | GTA | --- | 40 | 40 | B.1.160 | 0.001248 |
ORF7a | 71 | V71del | GTA | --- | 39 | 39 | B.1.637 | 0.00285 |
ORF7a | 71 | V71del | GTA | --- | 38 | 38 | AY.54 | 0.003623 |
ORF7a | 71 | V71I | Gta | Ata | 37 | 37 | AY.47 | 0.001151 |
ORF7a | 71 | V71del2 | gTA | g-- | 18 | 37 | B.1.617.2 | 0.000068 |
ORF7a | 71 | V71del2 | GTa | --a | 16 | 37 | B.1.617.2 | 0.00006 |
ORF7a | 71 | V71del2 | GTA | A-- | 3 | 37 | B.1.617.2 | 0.000011 |
ORF7a | 71 | V71del | GTA | --- | 36 | 36 | B.1.1.214 | 0.001996 |
ORF7a | 71 | V71del | GTA | --- | 36 | 36 | B.1.628 | 0.012685 |
ORF7a | 71 | V71del | GTA | --- | 35 | 35 | AY.45 | 0.004259 |
ORF7a | 71 | V71A | gTa | gCa | 35 | 35 | AY.74 | 0.004048 |
ORF7a | 71 | V71del1 | gtA | gt- | 23 | 34 | AY.103 | 0.000143 |
ORF7a | 71 | V71del1 | Gta | -ta | 11 | 34 | AY.103 | 0.000068 |
ORF7a | 71 | V71del | GTA | --- | 33 | 33 | AY.36 | 0.004891 |
ORF7a | 71 | V71del | GTA | --- | 32 | 32 | AY.37 | 0.010114 |
ORF7a | 71 | V71del | GTA | --- | 32 | 32 | B.1.1 | 0.000581 |
ORF7a | 71 | V71V | gtA | gtG | 25 | 32 | B.1.1.7 | 0.000022 |
ORF7a | 71 | V71V | gtA | gtT | 4 | 32 | B.1.1.7 | 0.000004 |
ORF7a | 71 | V71V | gtA | gtC | 3 | 32 | B.1.1.7 | 0.000003 |
ORF7a | 71 | V71del | GTA | --- | 31 | 31 | AY.34 | 0.003006 |
ORF7a | 71 | V71I | Gta | Ata | 31 | 31 | B.1.2 | 0.000273 |
ORF7a | 71 | V71del | GTA | --- | 30 | 30 | AY.118 | 0.001879 |
ORF7a | 71 | V71I | Gta | Ata | 30 | 30 | AY.29 | 0.000473 |
ORF7a | 71 | V71L | Gta | Tta | 30 | 30 | AY.46.6 | 0.002166 |
ORF7a | 71 | V71del | GTA | --- | 30 | 30 | AY.5.4 | 0.008301 |
ORF7a | 71 | V71del | GTA | --- | 30 | 30 | AY.98.1 | 0.001453 |
ORF7a | 71 | V71del | GTA | --- | 29 | 29 | AY.7.2 | 0.016219 |
ORF7a | 71 | V71del | GTA | --- | 29 | 29 | AY.99.2 | 0.002673 |
ORF7a | 71 | V71I | Gta | Ata | 29 | 29 | AY.99.2 | 0.002673 |
ORF7a | 71 | V71V | gtA | gtG | 28 | 28 | AY.119 | 0.000989 |
ORF7a | 71 | V71I | Gta | Ata | 28 | 28 | P.1 | 0.000441 |
ORF7a | 71 | V71I | Gta | Ata | 28 | 28 | P.1.1 | 0.008895 |
ORF7a | 71 | V71del | GTA | --- | 27 | 27 | AY.114 | 0.00624 |
ORF7a | 71 | V71I | Gta | Ata | 27 | 27 | AY.3 | 0.000269 |
ORF7a | 71 | V71del | GTA | --- | 27 | 27 | C.37 | 0.003134 |
ORF7a | 71 | V71del | GTA | --- | 26 | 26 | AY.121 | 0.003518 |
ORF7a | 71 | V71del | GTA | --- | 25 | 25 | AY.110 | 0.002817 |
ORF7a | 71 | V71del1 | Gta | -ta | 17 | 25 | AY.4 | 0.000026 |
ORF7a | 71 | V71del1 | gtA | gt- | 7 | 25 | AY.4 | 0.000011 |
ORF7a | 71 | V71del1 | GtA | -tN | 1 | 25 | AY.4 | 0.000002 |
ORF7a | 71 | V71del | GTA | --- | 25 | 25 | AY.9 | 0.00169 |
ORF7a | 71 | V71del | GTA | --- | 25 | 25 | B.1.1.519 | 0.000993 |
ORF7a | 71 | V71L | Gta | Tta | 25 | 25 | B.1.160 | 0.00078 |
ORF7a | 71 | V71del | GTA | --- | 25 | 25 | B.1.596 | 0.002178 |
ORF7a | 71 | V71A | gTa | gCa | 24 | 24 | AY.4 | 0.000037 |
ORF7a | 71 | V71L | Gta | Tta | 24 | 24 | B.1.1.70 | 0.008186 |
ORF7a | 71 | V71I | Gta | Ata | 23 | 23 | AY.117 | 0.001944 |
ORF7a | 71 | V71L | Gta | Tta | 23 | 23 | AY.43 | 0.000102 |
ORF7a | 71 | V71V | gtA | gtG | 23 | 23 | B.1.399 | 0.044487 |
ORF7a | 71 | V71del | GTA | --- | 23 | 23 | B.1.427 | 0.001161 |
ORF7a | 71 | V71F | GtA | TtT | 20 | 21 | All | 0.000004 |
ORF7a | 71 | V71F | GtA | TtC | 1 | 21 | All | 0 |
ORF7a | 71 | V71I | Gta | Ata | 21 | 21 | AY.108 | 0.023153 |
ORF7a | 71 | V71I | Gta | Ata | 21 | 21 | AY.114 | 0.004853 |
ORF7a | 71 | V71L | Gta | Tta | 18 | 21 | AY.44 | 0.00011 |
ORF7a | 71 | V71L | Gta | Cta | 2 | 21 | AY.44 | 0.000012 |
ORF7a | 71 | V71L | GtA | TtG | 1 | 21 | AY.44 | 0.000006 |
ORF7a | 71 | V71del | GTA | --- | 21 | 21 | R.1 | 0.00189 |
ORF7a | 71 | V71del2 | gTA | g-- | 11 | 20 | AY.103 | 0.000068 |
ORF7a | 71 | V71del2 | GTa | --a | 8 | 20 | AY.103 | 0.00005 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 20 | AY.103 | 0.000006 |
ORF7a | 71 | V71F | GtA | TtT | 20 | 20 | AY.44 | 0.000122 |
ORF7a | 71 | V71del | GTA | --- | 20 | 20 | AY.9.2 | 0.000735 |
ORF7a | 71 | V71del | GTA | --- | 19 | 19 | AY.35 | 0.004428 |
ORF7a | 71 | V71del2 | gTA | g-- | 11 | 19 | B.1.1.7 | 0.00001 |
ORF7a | 71 | V71del2 | GTa | --a | 7 | 19 | B.1.1.7 | 0.000006 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 19 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71L | Gta | Tta | 16 | 18 | AY.103 | 0.000099 |
ORF7a | 71 | V71L | Gta | Cta | 2 | 18 | AY.103 | 0.000012 |
ORF7a | 71 | V71del | GTA | --- | 18 | 18 | AY.120.1 | 0.005778 |
ORF7a | 71 | V71I | Gta | Ata | 18 | 18 | AY.20 | 0.0007 |
ORF7a | 71 | V71L | Gta | Tta | 18 | 18 | B.1.1.176 | 0.007909 |
ORF7a | 71 | V71del1 | Gta | -ta | 12 | 18 | B.1.1.7 | 0.000011 |
ORF7a | 71 | V71del1 | gtA | gt- | 4 | 18 | B.1.1.7 | 0.000004 |
ORF7a | 71 | V71del1 | GtA | Nt- | 1 | 18 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71del1 | gTa | g-a | 1 | 18 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71del | GTA | --- | 17 | 17 | AY.106 | 0.005693 |
ORF7a | 71 | V71del | GTA | --- | 17 | 17 | AY.30 | 0.006727 |
ORF7a | 71 | V71del2 | gTA | g-- | 17 | 17 | AY.34 | 0.001648 |
ORF7a | 71 | V71I | Gta | Ata | 17 | 17 | AY.5 | 0.000351 |
ORF7a | 71 | V71V | gtA | gtT | 17 | 17 | B.1.258 | 0.001131 |
ORF7a | 71 | V71I | Gta | Ata | 16 | 16 | AY.23 | 0.001116 |
ORF7a | 71 | V71I | Gta | Ata | 16 | 16 | B.1.177.85 | 0.086957 |
ORF7a | 71 | V71L | Gta | Tta | 16 | 16 | B.1.628 | 0.005638 |
ORF7a | 71 | V71V | gtA | gtG | 14 | 15 | AY.103 | 0.000087 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 15 | AY.103 | 0.000006 |
ORF7a | 71 | V71del | GTA | --- | 15 | 15 | AY.107 | 0.00699 |
ORF7a | 71 | V71del | GTA | --- | 15 | 15 | AY.111 | 0.002747 |
ORF7a | 71 | V71del | GTA | --- | 15 | 15 | AY.7 | 0.00294 |
ORF7a | 71 | V71I | Gta | Ata | 15 | 15 | AY.75 | 0.00084 |
ORF7a | 71 | V71E | gTa | gAa | 11 | 14 | All | 0.000002 |
ORF7a | 71 | V71E | gTA | gAG | 3 | 14 | All | 0.000001 |
ORF7a | 71 | V71I | Gta | Ata | 14 | 14 | AY.102 | 0.000371 |
ORF7a | 71 | V71I | Gta | Ata | 14 | 14 | AY.110 | 0.001578 |
ORF7a | 71 | V71del | GTA | --- | 14 | 14 | AY.116 | 0.004015 |
ORF7a | 71 | V71I | Gta | Ata | 14 | 14 | AY.118 | 0.000877 |
ORF7a | 71 | V71V | gtA | gtT | 10 | 14 | AY.44 | 0.000061 |
ORF7a | 71 | V71V | gtA | gtG | 2 | 14 | AY.44 | 0.000012 |
ORF7a | 71 | V71V | gtA | gtC | 2 | 14 | AY.44 | 0.000012 |
ORF7a | 71 | V71L | Gta | Tta | 14 | 14 | B.1 | 0.000128 |
ORF7a | 71 | V71del | GTA | --- | 14 | 14 | B.1.1.258 | 0.045603 |
ORF7a | 71 | V71del | GTA | --- | 14 | 14 | P.1.14 | 0.000669 |
ORF7a | 71 | V71del | GTA | --- | 13 | 13 | AY.14 | 0.001144 |
ORF7a | 71 | V71I | Gta | Ata | 13 | 13 | B.1.1.301 | 0.01533 |
ORF7a | 71 | V71L | Gta | Tta | 13 | 13 | B.1.575 | 0.003944 |
ORF7a | 71 | V71L | Gta | Tta | 13 | 13 | B.1.638 | 0.684211 |
ORF7a | 71 | V71del | GTA | --- | 12 | 12 | AY.12 | 0.003793 |
ORF7a | 71 | V71del1 | gtA | gt- | 12 | 12 | AY.29 | 0.000189 |
ORF7a | 71 | V71I | Gta | Ata | 12 | 12 | AY.4.5 | 0.00129 |
ORF7a | 71 | V71del | GTA | --- | 12 | 12 | AY.46.2 | 0.007624 |
ORF7a | 71 | V71del | GTA | --- | 12 | 12 | AY.84 | 0.005249 |
ORF7a | 71 | V71del | GTA | --- | 12 | 12 | AY.99 | 0.012592 |
ORF7a | 71 | V71V | gtA | gtT | 12 | 12 | B.1.2 | 0.000106 |
ORF7a | 71 | V71del | GTA | --- | 12 | 12 | B.1.324 | 0.019262 |
ORF7a | 71 | V71I | Gta | Ata | 12 | 12 | B.1.36 | 0.001751 |
ORF7a | 71 | V71I | Gta | Ata | 12 | 12 | B.1.429 | 0.000282 |
ORF7a | 71 | V71I | Gta | Ata | 12 | 12 | B.1.526 | 0.000282 |
ORF7a | 71 | V71del | GTA | --- | 12 | 12 | Q.8 | 0.001979 |
ORF7a | 71 | V71K | GTa | AAa | 10 | 11 | All | 0.000002 |
ORF7a | 71 | V71K | GTA | AAG | 1 | 11 | All | 0 |
ORF7a | 71 | V71del2 | gTA | g-- | 8 | 11 | AY.102 | 0.000212 |
ORF7a | 71 | V71del2 | GTa | --a | 3 | 11 | AY.102 | 0.00008 |
ORF7a | 71 | V71I | Gta | Ata | 11 | 11 | AY.119 | 0.000388 |
ORF7a | 71 | V71I | Gta | Ata | 11 | 11 | AY.26 | 0.000311 |
ORF7a | 71 | V71I | Gta | Ata | 11 | 11 | AY.36 | 0.00163 |
ORF7a | 71 | V71I | Gta | Ata | 11 | 11 | AY.4.2 | 0.000239 |
ORF7a | 71 | V71del | GTA | --- | 11 | 11 | B.1.177.15 | 0.00694 |
ORF7a | 71 | V71del2 | GTa | --a | 10 | 11 | B.1.2 | 0.000088 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 11 | B.1.2 | 0.000009 |
ORF7a | 71 | V71del | GTA | --- | 11 | 11 | B.1.234 | 0.001451 |
ORF7a | 71 | V71A | gTa | gCa | 11 | 11 | R.1 | 0.00099 |
ORF7a | 71 | V71G | gTa | gGa | 7 | 10 | All | 0.000001 |
ORF7a | 71 | V71G | gTA | gGG | 2 | 10 | All | 0 |
ORF7a | 71 | V71G | gTA | gGT | 1 | 10 | All | 0 |
ORF7a | 71 | V71I | Gta | Ata | 10 | 10 | AY.46 | 0.001041 |
ORF7a | 71 | V71del | GTA | --- | 10 | 10 | AY.7.1 | 0.001127 |
ORF7a | 71 | V71del | GTA | --- | 10 | 10 | AY.71 | 0.004751 |
ORF7a | 71 | V71del | GTA | --- | 10 | 10 | AY.74 | 0.001156 |
ORF7a | 71 | V71del | GTA | --- | 10 | 10 | AY.87 | 0.008326 |
ORF7a | 71 | V71I | Gta | Ata | 10 | 10 | AY.92 | 0.002873 |
ORF7a | 71 | V71del2 | GTa | --a | 10 | 10 | C.37 | 0.001161 |
ORF7a | 71 | V71del | GTA | --- | 9 | 9 | AY.10 | 0.004769 |
ORF7a | 71 | V71I | Gta | Ata | 9 | 9 | AY.33 | 0.000601 |
ORF7a | 71 | V71del2 | GTa | --a | 6 | 9 | AY.43 | 0.000027 |
ORF7a | 71 | V71del2 | gTA | g-- | 3 | 9 | AY.43 | 0.000013 |
ORF7a | 71 | V71del | GTA | --- | 9 | 9 | AY.46.5 | 0.001786 |
ORF7a | 71 | V71I | Gta | Ata | 9 | 9 | AY.5.3 | 0.003036 |
ORF7a | 71 | V71del | GTA | --- | 9 | 9 | B.1.258.9 | 0.045 |
ORF7a | 71 | V71del1 | gtA | gt- | 5 | 9 | B.1.617.2 | 0.000019 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 9 | B.1.617.2 | 0.000004 |
ORF7a | 71 | V71del1 | GtA | At- | 1 | 9 | B.1.617.2 | 0.000004 |
ORF7a | 71 | V71del1 | GtA | -tG | 1 | 9 | B.1.617.2 | 0.000004 |
ORF7a | 71 | V71del1 | GTA | -NN | 1 | 9 | B.1.617.2 | 0.000004 |
ORF7a | 71 | V71del | GTA | --- | 9 | 9 | L.1 | 0.017143 |
ORF7a | 71 | V71A | gTa | gCa | 9 | 9 | P.1.2 | 0.010405 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | AY.13 | 0.001288 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | AY.16 | 0.003037 |
ORF7a | 71 | V71V | gtA | gtG | 6 | 8 | AY.25 | 0.000036 |
ORF7a | 71 | V71V | gtA | gtT | 2 | 8 | AY.25 | 0.000012 |
ORF7a | 71 | V71del1 | GtA | At- | 3 | 8 | AY.39 | 0.000074 |
ORF7a | 71 | V71del1 | GtA | -tN | 2 | 8 | AY.39 | 0.000049 |
ORF7a | 71 | V71del1 | Gta | -ta | 2 | 8 | AY.39 | 0.000049 |
ORF7a | 71 | V71del1 | GTA | -NN | 1 | 8 | AY.39 | 0.000025 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | AY.4.2.1 | 0.001192 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | AY.4.5 | 0.00086 |
ORF7a | 71 | V71del1 | gtA | gt- | 2 | 8 | AY.44 | 0.000012 |
ORF7a | 71 | V71del1 | Gta | -ta | 2 | 8 | AY.44 | 0.000012 |
ORF7a | 71 | V71del1 | GTA | -NN | 2 | 8 | AY.44 | 0.000012 |
ORF7a | 71 | V71del1 | GtA | At- | 1 | 8 | AY.44 | 0.000006 |
ORF7a | 71 | V71del1 | GtA | -tT | 1 | 8 | AY.44 | 0.000006 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | AY.59 | 0.004237 |
ORF7a | 71 | V71V | gtA | gtC | 8 | 8 | AY.75 | 0.000448 |
ORF7a | 71 | V71I | Gta | Ata | 8 | 8 | B.1 | 0.000073 |
ORF7a | 71 | V71V | gtA | gtG | 6 | 8 | B.1 | 0.000055 |
ORF7a | 71 | V71V | gtA | gtT | 2 | 8 | B.1 | 0.000018 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | B.1.1.231 | 0.024768 |
ORF7a | 71 | V71L | Gta | Tta | 8 | 8 | B.1.177 | 0.000105 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | B.1.243 | 0.000557 |
ORF7a | 71 | V71del | GTA | --- | 8 | 8 | B.1.525 | 0.000905 |
ORF7a | 71 | V71A | gTa | gCa | 8 | 8 | B.1.617.2 | 0.00003 |
ORF7a | 71 | V71del | GTA | --- | 7 | 7 | AY.19 | 0.007982 |
ORF7a | 71 | V71del | GTA | --- | 7 | 7 | AY.34.1 | 0.00357 |
ORF7a | 71 | V71I | Gta | Ata | 7 | 7 | AY.42 | 0.000282 |
ORF7a | 71 | V71V | gtA | gtG | 4 | 7 | AY.43 | 0.000018 |
ORF7a | 71 | V71V | gtA | gtT | 3 | 7 | AY.43 | 0.000013 |
ORF7a | 71 | V71del | GTA | --- | 7 | 7 | AY.49 | 0.022364 |
ORF7a | 71 | V71L | Gta | Tta | 7 | 7 | B.1.1.214 | 0.000388 |
ORF7a | 71 | V71L | Gta | Tta | 6 | 7 | B.1.2 | 0.000053 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 7 | B.1.2 | 0.000009 |
ORF7a | 71 | V71I | Gta | Ata | 7 | 7 | B.1.621 | 0.00062 |
ORF7a | 71 | V71V | gtA | gtT | 5 | 7 | P.1 | 0.000079 |
ORF7a | 71 | V71V | gtA | gtG | 2 | 7 | P.1 | 0.000032 |
ORF7a | 71 | V71del | GTA | --- | 7 | 7 | P.1.15 | 0.001626 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.113 | 0.000854 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.116 | 0.001721 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.120 | 0.000223 |
ORF7a | 71 | V71A | gTa | gCa | 6 | 6 | AY.25 | 0.000036 |
ORF7a | 71 | V71del | GTA | --- | 6 | 6 | AY.29.1 | 0.001323 |
ORF7a | 71 | V71L | Gta | Tta | 6 | 6 | AY.3 | 0.00006 |
ORF7a | 71 | V71V | gtA | gtT | 3 | 6 | AY.3 | 0.00003 |
ORF7a | 71 | V71V | gtA | gtG | 2 | 6 | AY.3 | 0.00002 |
ORF7a | 71 | V71V | gtA | gtC | 1 | 6 | AY.3 | 0.00001 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.30 | 0.002374 |
ORF7a | 71 | V71del1 | Gta | -ta | 6 | 6 | AY.4.2 | 0.00013 |
ORF7a | 71 | V71del | GTA | --- | 6 | 6 | AY.40 | 0.005786 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.45 | 0.00073 |
ORF7a | 71 | V71del2 | GTa | --a | 4 | 6 | AY.5 | 0.000083 |
ORF7a | 71 | V71del2 | gTA | g-- | 2 | 6 | AY.5 | 0.000041 |
ORF7a | 71 | V71del | GTA | --- | 6 | 6 | AY.65 | 0.003198 |
ORF7a | 71 | V71del | GTA | --- | 6 | 6 | AY.73 | 0.003992 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.87 | 0.004996 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.9.2 | 0.00022 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | AY.91 | 0.004383 |
ORF7a | 71 | V71L | Gta | Tta | 6 | 6 | AY.99.2 | 0.000553 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | B.1.160 | 0.000187 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | B.1.177 | 0.000079 |
ORF7a | 71 | V71V | gtA | gtG | 6 | 6 | B.1.177.32 | 0.008097 |
ORF7a | 71 | V71del1 | gtA | gt- | 5 | 6 | B.1.2 | 0.000044 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 6 | B.1.2 | 0.000009 |
ORF7a | 71 | V71del | GTA | --- | 6 | 6 | B.1.214.2 | 0.003597 |
ORF7a | 71 | V71I | Gta | Ata | 6 | 6 | B.1.258 | 0.000399 |
ORF7a | 71 | V71del | GTA | --- | 6 | 6 | B.1.595 | 0.001566 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | A | 0.001935 |
ORF7a | 71 | V71V | gtA | gtG | 5 | 5 | A | 0.001935 |
ORF7a | 71 | V71del2 | gTA | g-- | 5 | 5 | AY.114 | 0.001156 |
ORF7a | 71 | V71I | Gta | Ata | 5 | 5 | AY.13 | 0.000805 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | AY.24 | 0.002155 |
ORF7a | 71 | V71del2 | gTA | g-- | 3 | 5 | AY.26 | 0.000085 |
ORF7a | 71 | V71del2 | GTa | --a | 2 | 5 | AY.26 | 0.000057 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | AY.27 | 0.000324 |
ORF7a | 71 | V71del1 | GtA | At- | 5 | 5 | AY.39.1 | 0.000198 |
ORF7a | 71 | V71del1 | gtA | gt- | 4 | 5 | AY.43 | 0.000018 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 5 | AY.43 | 0.000004 |
ORF7a | 71 | V71A | gTa | gCa | 5 | 5 | AY.44 | 0.00003 |
ORF7a | 71 | V71V | gtA | gtG | 5 | 5 | AY.46 | 0.00052 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | AY.46.1 | 0.005133 |
ORF7a | 71 | V71I | Gta | Ata | 5 | 5 | AY.46.6 | 0.000361 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | AY.62 | 0.002179 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | AY.80 | 0.005643 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | AY.91 | 0.003652 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | AY.95 | 0.003805 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | B.1.1.33 | 0.002104 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | B.1.1.37 | 0.000964 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | B.1.1.56 | 0.089286 |
ORF7a | 71 | V71V | gtA | gtG | 5 | 5 | B.1.177 | 0.000066 |
ORF7a | 71 | V71K | GTa | AAa | 5 | 5 | B.1.177.21 | 0.000382 |
ORF7a | 71 | V71E | gTA | gAG | 3 | 5 | B.1.177.21 | 0.000229 |
ORF7a | 71 | V71E | gTa | gAa | 2 | 5 | B.1.177.21 | 0.000153 |
ORF7a | 71 | V71L | Gta | Tta | 5 | 5 | B.1.177.53 | 0.011962 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | B.1.375 | 0.004098 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | B.1.623 | 0.002682 |
ORF7a | 71 | V71V | gtA | gtT | 5 | 5 | B.1.626 | 0.028571 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | B.1.70 | 0.121951 |
ORF7a | 71 | V71L | Gta | Tta | 5 | 5 | C.16 | 0.005302 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | D.2 | 0.000375 |
ORF7a | 71 | V71del2 | gTA | g-- | 2 | 5 | P.1 | 0.000032 |
ORF7a | 71 | V71del2 | GTa | --a | 2 | 5 | P.1 | 0.000032 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 5 | P.1 | 0.000016 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | P.1.7 | 0.001596 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | P.2 | 0.000933 |
ORF7a | 71 | V71del | GTA | --- | 5 | 5 | Q.1 | 0.000632 |
ORF7a | 71 | V71R | GTa | CGa | 2 | 4 | All | 0 |
ORF7a | 71 | V71R | GTA | CGT | 1 | 4 | All | 0 |
ORF7a | 71 | V71R | GTA | AGG | 1 | 4 | All | 0 |
ORF7a | 71 | V71I | Gta | Ata | 4 | 4 | AY.100 | 0.000184 |
ORF7a | 71 | V71I | Gta | Ata | 4 | 4 | AY.101 | 0.001962 |
ORF7a | 71 | V71V | gtA | gtG | 4 | 4 | AY.102 | 0.000106 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 4 | AY.102 | 0.00008 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 4 | AY.102 | 0.000027 |
ORF7a | 71 | V71del2 | gTA | g-- | 3 | 4 | AY.117 | 0.000254 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 4 | AY.117 | 0.000085 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.120.2 | 0.005141 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.2 | 0.001425 |
ORF7a | 71 | V71V | gtA | gtG | 3 | 4 | AY.20 | 0.000117 |
ORF7a | 71 | V71V | gtA | gtC | 1 | 4 | AY.20 | 0.000039 |
ORF7a | 71 | V71I | Gta | Ata | 4 | 4 | AY.3.1 | 0.000341 |
ORF7a | 71 | V71L | Gta | Tta | 4 | 4 | AY.33 | 0.000267 |
ORF7a | 71 | V71V | gtA | gtG | 4 | 4 | AY.45 | 0.000487 |
ORF7a | 71 | V71del2 | GTa | --a | 4 | 4 | AY.46 | 0.000416 |
ORF7a | 71 | V71del2 | gTA | g-- | 2 | 4 | AY.47 | 0.000062 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 4 | AY.47 | 0.000031 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 4 | AY.47 | 0.000031 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.48 | 0.00186 |
ORF7a | 71 | V71del2 | GTa | --a | 4 | 4 | AY.5.2 | 0.009852 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.5.3 | 0.00135 |
ORF7a | 71 | V71I | Gta | Ata | 4 | 4 | AY.65 | 0.002132 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.66 | 0.004278 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.88 | 0.003537 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.92 | 0.001149 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | AY.93 | 0.001092 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.1.1 | 0.001307 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.1.164 | 0.020619 |
ORF7a | 71 | V71L | Gta | Tta | 4 | 4 | B.1.1.222 | 0.000816 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.1.25 | 0.002274 |
ORF7a | 71 | V71L | Gta | Tta | 4 | 4 | B.1.118 | 0.026846 |
ORF7a | 71 | V71del2 | GTA | A-- | 2 | 4 | B.1.160 | 0.000062 |
ORF7a | 71 | V71del2 | GTa | --a | 2 | 4 | B.1.160 | 0.000062 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.258 | 0.000266 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.351.2 | 0.00121 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.36 | 0.000584 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.466.2 | 0.001565 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.575 | 0.001214 |
ORF7a | 71 | V71I | Gta | Ata | 4 | 4 | B.1.575 | 0.001214 |
ORF7a | 71 | V71del | GTA | --- | 4 | 4 | B.1.577 | 0.002749 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | A | 0.001161 |
ORF7a | 71 | V71X | GTa | TAa | 3 | 3 | All | 0.000001 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.105 | 0.001929 |
ORF7a | 71 | V71K | GTa | AAa | 3 | 3 | AY.106 | 0.001005 |
ORF7a | 71 | V71del2 | GTa | --a | 3 | 3 | AY.107 | 0.001398 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | AY.111 | 0.000549 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.116.1 | 0.000934 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | AY.119 | 0.000106 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | AY.121 | 0.000406 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | AY.14 | 0.000264 |
ORF7a | 71 | V71L | Gta | Cta | 2 | 3 | AY.29 | 0.000032 |
ORF7a | 71 | V71del2 | GTa | --a | 2 | 3 | AY.29 | 0.000032 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 3 | AY.29 | 0.000016 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 3 | AY.29 | 0.000016 |
ORF7a | 71 | V71del2 | GTA | A-- | 3 | 3 | AY.3.1 | 0.000256 |
ORF7a | 71 | V71del2 | GTA | A-- | 2 | 3 | AY.39.1 | 0.000079 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 3 | AY.39.1 | 0.00004 |
ORF7a | 71 | V71del2 | gTA | g-- | 3 | 3 | AY.4.2 | 0.000065 |
ORF7a | 71 | V71A | gTa | gCa | 3 | 3 | AY.43 | 0.000013 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | AY.46.2 | 0.001906 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | AY.47 | 0.000093 |
ORF7a | 71 | V71V | gtA | gtG | 3 | 3 | AY.5 | 0.000062 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.53 | 0.000863 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.64 | 0.001786 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | AY.68 | 0.000821 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.69 | 0.00056 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.8 | 0.001818 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.85 | 0.001282 |
ORF7a | 71 | V71A | gTa | gCa | 3 | 3 | AY.88 | 0.002653 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | AY.90 | 0.002053 |
ORF7a | 71 | V71V | gtA | gtC | 3 | 3 | AY.98.1 | 0.000145 |
ORF7a | 71 | V71del2 | gTA | g-- | 2 | 3 | AY.98.1 | 0.000097 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 3 | AY.98.1 | 0.000048 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | B | 0.000383 |
ORF7a | 71 | V71del2 | gTA | g-- | 3 | 3 | B.1 | 0.000027 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | B.1.1 | 0.000054 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.1.121 | 0.007282 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.1.170 | 0.003741 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.1.189 | 0.004539 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.1.222 | 0.000612 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | B.1.1.39 | 0.001529 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | B.1.1.50 | 0.002037 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | B.1.1.519 | 0.000119 |
ORF7a | 71 | V71X | GTa | TAa | 3 | 3 | B.1.177.21 | 0.000229 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.177.57 | 0.000843 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.177.7 | 0.000495 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.221 | 0.000213 |
ORF7a | 71 | V71A | gTa | gCa | 3 | 3 | B.1.258 | 0.0002 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.258.17 | 0.000312 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.311 | 0.000824 |
ORF7a | 71 | V71A | gTa | gCa | 3 | 3 | B.1.351 | 0.000089 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.36.36 | 0.001806 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | B.1.36.38 | 0.004926 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.369 | 0.000856 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | B.1.427 | 0.000151 |
ORF7a | 71 | V71del1 | gtA | gt- | 3 | 3 | B.1.596 | 0.000261 |
ORF7a | 71 | V71del | GTA | --- | 3 | 3 | B.1.626 | 0.017143 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | P.1.10 | 0.000808 |
ORF7a | 71 | V71L | Gta | Tta | 3 | 3 | P.1.14 | 0.000143 |
ORF7a | 71 | V71I | Gta | Ata | 3 | 3 | P.1.15 | 0.000697 |
ORF7a | 71 | V71del1 | gtA | gt- | 2 | 2 | 0.111111 | |
ORF7a | 71 | V71R | GTA | CGT | 1 | 2 | 0.055556 | |
ORF7a | 71 | V71G | gTA | gGT | 1 | 2 | 0.055556 | |
ORF7a | 71 | V71G | gTa | gGa | 1 | 2 | 0.055556 | |
ORF7a | 71 | V71L | GtA | CtT | 1 | 2 | 0.055556 | |
ORF7a | 71 | V71R | GTa | CGa | 1 | 2 | 0.055556 | |
ORF7a | 71 | V71L | Gta | Cta | 1 | 2 | 0.055556 | |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | A.1 | 0.000564 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | A.23.1 | 0.001408 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | A.28 | 0.005291 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AD.2 | 0.000438 |
ORF7a | 71 | V71S | GTa | TCa | 2 | 2 | All | 0 |
ORF7a | 71 | V71N | GTA | AAT | 2 | 2 | All | 0 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.1 | 0.000791 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 2 | AY.100 | 0.000046 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 2 | AY.100 | 0.000046 |
ORF7a | 71 | V71del1 | gtA | gt- | 2 | 2 | AY.102 | 0.000053 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.105 | 0.001286 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.106 | 0.00067 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.108 | 0.002205 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.109 | 0.001479 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.113 | 0.000285 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.117 | 0.000169 |
ORF7a | 71 | V71A | gTa | gCa | 2 | 2 | AY.118 | 0.000125 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 2 | AY.120 | 0.000037 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 2 | AY.120 | 0.000037 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.120.1 | 0.000642 |
ORF7a | 71 | V71del2 | gTA | g-- | 2 | 2 | AY.14 | 0.000176 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.20 | 0.000078 |
ORF7a | 71 | V71V | gtA | gtG | 2 | 2 | AY.26 | 0.000057 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 2 | AY.26 | 0.000028 |
ORF7a | 71 | V71del1 | GTa | -Aa | 1 | 2 | AY.26 | 0.000028 |
ORF7a | 71 | V71del1 | gtA | gt- | 2 | 2 | AY.3 | 0.00002 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.36 | 0.000296 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.39.1 | 0.000079 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.4.1 | 0.001475 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.4.2 | 0.000043 |
ORF7a | 71 | V71A | gTa | gCa | 2 | 2 | AY.4.2 | 0.000043 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.4.4 | 0.000818 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.41 | 0.000588 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 2 | AY.45 | 0.000122 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 2 | AY.45 | 0.000122 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.46 | 0.000208 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.5 | 0.000041 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.51 | 0.001818 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.52 | 0.001629 |
ORF7a | 71 | V71A | gTa | gCa | 2 | 2 | AY.54 | 0.000191 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 2 | AY.54 | 0.000095 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 2 | AY.54 | 0.000095 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.7.1 | 0.000225 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.70 | 0.000417 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.71 | 0.00095 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.75 | 0.000112 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.75.1 | 0.000361 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.79 | 0.002421 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.80 | 0.002257 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AY.82 | 0.002714 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.85 | 0.000854 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.93 | 0.000546 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.95 | 0.001522 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | AY.98.1 | 0.000097 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | AY.98.1 | 0.000097 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | AZ.2 | 0.001642 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | B.1.1 | 0.000036 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.101 | 0.02 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.163 | 0.015267 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.192 | 0.004619 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | B.1.1.214 | 0.000111 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.220 | 0.003717 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.265 | 0.006309 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.1.277 | 0.001517 |
ORF7a | 71 | V71del2 | GTa | --a | 2 | 2 | B.1.1.284 | 0.000215 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.303 | 0.005525 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.311 | 0.000716 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.1.311 | 0.000716 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.318 | 0.000604 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.372 | 0.001377 |
ORF7a | 71 | V71V | gtA | gtG | 2 | 2 | B.1.1.50 | 0.001358 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.1.521 | 0.010695 |
ORF7a | 71 | V71S | GTa | TCa | 2 | 2 | B.1.1.7 | 0.000002 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.139 | 0.001466 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.160.16 | 0.001859 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.160.30 | 0.005952 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.177.10 | 0.001756 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.177.55 | 0.004662 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.177.81 | 0.000379 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.177.82 | 0.000955 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.177.86 | 0.000367 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.190 | 0.02 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | B.1.221 | 0.000142 |
ORF7a | 71 | V71G | gTA | gGG | 2 | 2 | B.1.221.4 | 0.008333 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.240 | 0.000431 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.258.11 | 0.000793 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.258.12 | 0.015748 |
ORF7a | 71 | V71del2 | gTA | g-- | 2 | 2 | B.1.280 | 0.014286 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.349 | 0.00143 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.351 | 0.000059 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.356 | 0.003454 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.36.29 | 0.001035 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.36.9 | 0.006431 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.396 | 0.001411 |
ORF7a | 71 | V71V | gtA | gtG | 2 | 2 | B.1.400 | 0.000858 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.422 | 0.001625 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.427 | 0.000101 |
ORF7a | 71 | V71V | gtA | gtG | 2 | 2 | B.1.429 | 0.000047 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 2 | B.1.429 | 0.000024 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 2 | B.1.429 | 0.000024 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.499 | 0.002101 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.509 | 0.001732 |
ORF7a | 71 | V71del2 | GTa | --a | 2 | 2 | B.1.526 | 0.000047 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.561 | 0.000794 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | B.1.596 | 0.000174 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.617.1 | 0.000258 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | B.1.621.1 | 0.001012 |
ORF7a | 71 | V71del1 | gtA | gt- | 2 | 2 | B.1.627 | 0.00404 |
ORF7a | 71 | V71I | Gta | Ata | 2 | 2 | B.1.637 | 0.000146 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | C.36.3 | 0.001134 |
ORF7a | 71 | V71L | Gta | Tta | 2 | 2 | C.37 | 0.000232 |
ORF7a | 71 | V71del1 | gtA | gt- | 2 | 2 | C.37 | 0.000232 |
ORF7a | 71 | V71A | gTa | gCa | 2 | 2 | P.1 | 0.000032 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | P.1.1 | 0.000635 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | P.1.12 | 0.000968 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | P.1.13 | 0.001797 |
ORF7a | 71 | V71del1 | gtA | gt- | 2 | 2 | P.1.14 | 0.000096 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | P.1.17.1 | 0.00175 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | P.1.2 | 0.002312 |
ORF7a | 71 | V71del | GTA | --- | 2 | 2 | Q.4 | 0.00091 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | 0.055556 | |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | A.1 | 0.000282 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | A.2.4 | 0.003367 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | A.2.5 | 0.000499 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | A.2.5 | 0.000499 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | A.23 | 0.010526 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AA.2 | 0.007692 |
ORF7a | 71 | V71Q | GTa | CAa | 1 | 1 | All | 0 |
ORF7a | 71 | V71M | GtA | AtG | 1 | 1 | All | 0 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AU.3 | 0.00211 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AW.1 | 0.003049 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.1 | 0.000396 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.103 | 0.000006 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.104 | 0.001984 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.106 | 0.000335 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.113 | 0.000142 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.113 | 0.000142 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.116 | 0.000287 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.119 | 0.000035 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.119 | 0.000035 |
ORF7a | 71 | V71A | gTA | gCT | 1 | 1 | AY.119 | 0.000035 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 71 | V71V | gtA | gtC | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.120.1 | 0.000321 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.121 | 0.000135 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.13 | 0.000161 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 1 | AY.16 | 0.00038 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 1 | AY.16 | 0.00038 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.20 | 0.000039 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.20 | 0.000039 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.21 | 0.001898 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.22 | 0.002092 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 71 | V71G | gTa | gGa | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.23.1 | 0.000417 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.24 | 0.000431 |
ORF7a | 71 | V71T | GTa | ACa | 1 | 1 | AY.25 | 0.000006 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.28 | 0.00189 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.29.1 | 0.000221 |
ORF7a | 71 | V71K | GTa | AAa | 1 | 1 | AY.3 | 0.00001 |
ORF7a | 71 | V71N | GTA | AAT | 1 | 1 | AY.3.1 | 0.000085 |
ORF7a | 71 | V71del1 | GtA | -tN | 1 | 1 | AY.3.1 | 0.000085 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.3.1 | 0.000085 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.3.1 | 0.000085 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.3.1 | 0.000085 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.32 | 0.000532 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.32 | 0.000532 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.34 | 0.000097 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.37 | 0.000316 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.37 | 0.000316 |
ORF7a | 71 | V71del1 | GTa | -Aa | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 71 | V71T | GTa | ACa | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 71 | V71M | GtA | AtG | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.39.2 | 0.001541 |
ORF7a | 71 | V71K | GTA | AAG | 1 | 1 | AY.4 | 0.000002 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.4.1 | 0.000737 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.4.2 | 0.000022 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.4.3 | 0.000842 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.4.4 | 0.000409 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.42 | 0.00004 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.45 | 0.000122 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 1 | AY.45 | 0.000122 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.46.2 | 0.000635 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.46.5 | 0.000198 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.46.5 | 0.000198 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.46.6 | 0.000072 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.47 | 0.000031 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.48 | 0.000465 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.5.4 | 0.000277 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.54 | 0.000095 |
ORF7a | 71 | V71T | GTa | ACa | 1 | 1 | AY.54 | 0.000095 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.55 | 0.000917 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | AY.55 | 0.000917 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.56 | 0.001605 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.58 | 0.000907 |
ORF7a | 71 | V71R | GTA | AGG | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.6 | 0.000041 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.6 | 0.000041 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.6 | 0.000041 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.6 | 0.000041 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | AY.6 | 0.000041 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.60 | 0.000938 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.61 | 0.000105 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.63 | 0.000387 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.64 | 0.000595 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.67 | 0.000464 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.67 | 0.000464 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.69 | 0.000187 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | AY.69 | 0.000187 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.7 | 0.000196 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.7 | 0.000196 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.7.1 | 0.000113 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.7.1 | 0.000113 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.7.2 | 0.000559 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.70 | 0.000209 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.72 | 0.001361 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.74 | 0.000116 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | AY.75 | 0.000056 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.75 | 0.000056 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.75.1 | 0.00018 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.78 | 0.001541 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.81 | 0.001992 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.84 | 0.000437 |
ORF7a | 71 | V71V | gtA | gtC | 1 | 1 | AY.85 | 0.000427 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.87 | 0.000833 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | AY.87 | 0.000833 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.88 | 0.000884 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.89 | 0.004902 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.89 | 0.004902 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | AY.9.1 | 0.000084 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.90 | 0.000684 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | AY.91 | 0.00073 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | AY.94 | 0.000443 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.95 | 0.000761 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.96 | 0.002075 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | AY.99 | 0.001049 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AY.99 | 0.001049 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.99 | 0.001049 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | AY.99.2 | 0.000092 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | AY.99.2 | 0.000092 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | AZ.5 | 0.003509 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | B | 0.000128 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B | 0.000128 |
ORF7a | 71 | V71G | gTa | gGa | 1 | 1 | B.1 | 0.000009 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | B.1 | 0.000009 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | B.1 | 0.000009 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.10 | 0.001115 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.113 | 0.006993 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.123 | 0.017857 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.135 | 0.004695 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.141 | 0.002012 |
ORF7a | 71 | V71G | gTa | gGa | 1 | 1 | B.1.1.153 | 0.001095 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.194 | 0.00495 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.205 | 0.003717 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.209 | 0.008929 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | B.1.1.214 | 0.000055 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.1.216 | 0.00089 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.222 | 0.000204 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | B.1.1.229 | 0.005747 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.241 | 0.00207 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.253 | 0.002506 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.277 | 0.000759 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.298 | 0.000862 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.301 | 0.001179 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.317 | 0.000412 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.317 | 0.000412 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | B.1.1.318 | 0.000302 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.1.318 | 0.000302 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.366 | 0.015873 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.383 | 0.0625 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.389 | 0.006061 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | B.1.1.39 | 0.00051 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.416 | 0.000905 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.420 | 0.001006 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 1 | B.1.1.432 | 0.001266 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.432 | 0.001266 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.432 | 0.001266 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.437 | 0.010417 |
ORF7a | 71 | V71V | gtA | gtC | 1 | 1 | B.1.1.448 | 0.002033 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | B.1.1.519 | 0.00004 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.523 | 0.001563 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.1.63 | 0.000386 |
ORF7a | 71 | V71R | GTa | CGa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71T | GTA | ACG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71F | GtA | TtC | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.110.3 | 0.000718 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.115 | 0.021739 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.128 | 0.000635 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | B.1.147 | 0.000756 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | B.1.160 | 0.000031 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 71 | V71K | GTa | AAa | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.177.19 | 0.001431 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.177.21 | 0.000076 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.177.33 | 0.001645 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | B.1.177.4 | 0.000211 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.177.44 | 0.000519 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.177.60 | 0.000218 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | B.1.177.63 | 0.002703 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.177.65 | 0.000665 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.177.75 | 0.001041 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF7a | 71 | V71N | GTA | AAT | 1 | 1 | B.1.2 | 0.000009 |
ORF7a | 71 | V71G | gTa | gGa | 1 | 1 | B.1.2 | 0.000009 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | B.1.2 | 0.000009 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.201 | 0.005682 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.206 | 0.000816 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.220 | 0.01087 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | B.1.223 | 0.002778 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.227 | 0.047619 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | B.1.232 | 0.000537 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.236 | 0.002053 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | B.1.237 | 0.004975 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | B.1.258.11 | 0.000396 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 1 | B.1.258.9 | 0.005 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.265 | 0.001271 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | B.1.298 | 0.002114 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.319 | 0.003049 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.319 | 0.003049 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.340 | 0.004292 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.351 | 0.00003 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.351.3 | 0.000876 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.351.5 | 0.0006 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.36 | 0.000146 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.36.17 | 0.000494 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.36.18 | 0.00042 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.36.38 | 0.001642 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.371 | 0.001122 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.380 | 0.006623 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | B.1.389 | 0.001002 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.389 | 0.001002 |
ORF7a | 71 | V71L | Gta | Cta | 1 | 1 | B.1.399 | 0.001934 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | B.1.400 | 0.000429 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.406 | 0.006061 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.408 | 0.00369 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.409 | 0.000781 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.415.1 | 0.007576 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.416 | 0.001269 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.426 | 0.001009 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | B.1.429 | 0.000024 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.433 | 0.003195 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.438.1 | 0.000107 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.443 | 0.004673 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.453 | 0.003236 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.459 | 0.004082 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.466.2 | 0.000391 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | B.1.466.2 | 0.000391 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.471 | 0.002732 |
ORF7a | 71 | V71V | gtA | gtC | 1 | 1 | B.1.497 | 0.000315 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | B.1.497 | 0.000315 |
ORF7a | 71 | V71Q | GTa | CAa | 1 | 1 | B.1.497 | 0.000315 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.517 | 0.000427 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.517 | 0.000427 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.530 | 0.007143 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.535 | 0.028571 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.540 | 0.009709 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.560 | 0.00463 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.564 | 0.000426 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.564 | 0.000426 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.564.1 | 0.001577 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.568 | 0.001111 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.568 | 0.001111 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.574 | 0.002151 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 71 | V71V | gtA | gtG | 1 | 1 | B.1.577 | 0.000687 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.588 | 0.00091 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | B.1.595 | 0.000261 |
ORF7a | 71 | V71A | gTa | gCa | 1 | 1 | B.1.596 | 0.000087 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.617.1 | 0.000129 |
ORF7a | 71 | V71del1 | Gta | -ta | 1 | 1 | B.1.617.1 | 0.000129 |
ORF7a | 71 | V71G | gTa | gGa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.617.3 | 0.002985 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.1.621.1 | 0.000506 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.627 | 0.00202 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | B.1.628 | 0.000352 |
ORF7a | 71 | V71del2 | GTA | A-- | 1 | 1 | B.1.637 | 0.000073 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.88.1 | 0.004808 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | B.1.9 | 0.006173 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.1.9.1 | 0.032258 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.11 | 0.005128 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | B.40 | 0.000364 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | B.55 | 0.00295 |
ORF7a | 71 | V71G | gTa | gGa | 1 | 1 | B.6 | 0.00091 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | C.30 | 0.001727 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | C.36.3.1 | 0.002717 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | C.37 | 0.000116 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | D.2 | 0.000075 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | D.2 | 0.000075 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | N.4 | 0.004255 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | N.5 | 0.001767 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | N.5 | 0.001767 |
ORF7a | 71 | V71E | gTa | gAa | 1 | 1 | P.1 | 0.000016 |
ORF7a | 71 | V71del1 | gtA | gt- | 1 | 1 | P.1 | 0.000016 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | P.1.10 | 0.000269 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | P.1.14 | 0.000048 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | P.1.14 | 0.000048 |
ORF7a | 71 | V71L | Gta | Tta | 1 | 1 | P.1.15 | 0.000232 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | P.1.16 | 0.000374 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | P.1.3 | 0.034483 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | P.1.8 | 0.004785 |
ORF7a | 71 | V71del2 | gTA | g-- | 1 | 1 | P.2 | 0.000187 |
ORF7a | 71 | V71V | gtA | gtT | 1 | 1 | Q.1 | 0.000126 |
ORF7a | 71 | V71del | GTA | --- | 1 | 1 | Q.7 | 0.001111 |
ORF7a | 71 | V71del1 | GTA | -NN | 1 | 1 | R.1 | 0.00009 |
ORF7a | 71 | V71I | Gta | Ata | 1 | 1 | R.1 | 0.00009 |
ORF7a | 71 | V71del2 | GTa | --a | 1 | 1 | Z.1 | 0.00289 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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