CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 61 & Codon = aAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a61T61NnonsynaCtaAt3543510.99152527574-27576

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a61T61NaCtaAt351354All0.000067
ORF7a61T61NaCtaAt135137AY.250.000812
ORF7a61T61NaCtaAt4040AY.430.000177
ORF7a61T61NaCtaAt3333B.1.1.70.00003
ORF7a61T61NaCtaAt2424AY.440.000146
ORF7a61T61NaCtaAt1818AY.40.000028
ORF7a61T61NaCtaAt1313P.10.000205
ORF7a61T61NaCtaAt1111AY.39.10.000436
ORF7a61T61NaCtaAt88B.1.617.20.00003
ORF7a61T61NaCtaAt66B.1.2340.000792
ORF7a61T61NaCtaAt44AY.30.00004
ORF7a61T61NaCtaAt44AY.390.000099
ORF7a61T61NaCtaAt44B.1.2430.000278
ORF7a61T61NaCtaAt33AY.9.10.000251
ORF7a61T61NaCtaAt33B.1.1.5190.000119
ORF7a61T61NaCtaAt33B.1.1770.00004
ORF7a61T61NaCtaAt33B.1.2210.000213
ORF7a61T61NaCtaAt220.111111
ORF7a61T61NaCtaAt22AY.4.20.000043
ORF7a61T61NaCtaAt22AY.50.000041
ORF7a61T61NaCtaAt22AY.99.20.000184
ORF7a61T61NaCtaAt22B.10.000018
ORF7a61T61NaCtaAt22B.1.1600.000062
ORF7a61T61NaCtaAt22B.1.177.410.005
ORF7a61T61NaCtaAt22B.1.258.170.000208
ORF7a61T61NaCtaAt11AY.1010.00049
ORF7a61T61NaCtaAt11AY.1030.000006
ORF7a61T61NaCtaAt11AY.1170.000085
ORF7a61T61NaCtaAt11AY.230.00007
ORF7a61T61NaCtaAt11AY.29.10.000221
ORF7a61T61NaCtaAt11AY.4.2.10.000149
ORF7a61T61NaCtaAt11AY.460.000104
ORF7a61T61NaCtaAt11AY.470.000031
ORF7a61T61NaCtaAt11AY.5.30.000337
ORF7a61T61NaCtaAt11AY.580.000907
ORF7a61T61NaCtaAt11AY.750.000056
ORF7a61T61NaCtaAt11AY.790.001211
ORF7a61T61NaCtaAt11AY.98.10.000048
ORF7a61T61NaCtaAt11AZ.20.000821
ORF7a61T61NaCtaAt11B.1.177.440.000519
ORF7a61T61NaCtaAt11B.1.3510.00003
ORF7a61T61NaCtaAt11B.1.4270.00005
ORF7a61T61NaCtaAt11B.1.4290.000024
ORF7a61T61NaCtaAt11B.1.4590.004082
ORF7a61T61NaCtaAt11B.1.5650.00081
ORF7a61T61NaCtaAt11B.1.6370.000073
ORF7a61T61NaCtaAt11P.1.20.001156
ORF7a61T61NaCtaAt11P.20.000187