CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 60 & Codon = agT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a60S60SsynagCagT175817550.99829427571-27573

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a60S60SagCagT17551758All0.000336
ORF7a60S60SagCagT510510AY.1110.093407
ORF7a60S60SagCagT354355B.1.617.20.001333
ORF7a60S60SagCagT296296AY.430.001311
ORF7a60S60SagCagT179179B.1.1.70.00016
ORF7a60S60SagCagT115115AY.40.000179
ORF7a60S60SagCagT5454AY.440.000329
ORF7a60S60SagCagT2525AY.34.10.012749
ORF7a60S60SagCagT2121AY.1190.000741
ORF7a60S60SagCagT2121AY.340.002036
ORF7a60S60SagCagT1919AY.330.001269
ORF7a60S60SagCagT1212AY.1030.000075
ORF7a60S60SagCagT99B.1.1.5190.000357
ORF7a60S60SagCagT88AY.1020.000212
ORF7a60S60SagCagT77AY.460.000729
ORF7a60S60SagCagT77AY.5.40.001937
ORF7a60S60SagCagT77B.10.000064
ORF7a60S60SagCagT66AY.920.001724
ORF7a60S60SagCagT66C.370.000696
ORF7a60S60SagCagT55AY.46.10.005133
ORF7a60S60SagCagT55AY.840.002187
ORF7a60S60SagCagT55B.1.20.000044
ORF7a60S60SagCagT55B.1.2580.000333
ORF7a60S60SagCagT44AY.250.000024
ORF7a60S60SagCagT44AY.390.000099
ORF7a60S60SagCagT44AY.50.000083
ORF7a60S60SagCagT44AY.890.019608
ORF7a60S60SagCagT33AY.1180.000188
ORF7a60S60SagCagT33AY.230.000209
ORF7a60S60SagCagT33AY.590.001589
ORF7a60S60SagCagT33AY.9.20.00011
ORF7a60S60SagCagT33P.10.000047
ORF7a60S60SagCagT22AY.30.00002
ORF7a60S60SagCagT22AY.360.000296
ORF7a60S60SagCagT22AY.7.20.001119
ORF7a60S60SagCagT22AY.770.002255
ORF7a60S60SagCagT22B.1.10.000036
ORF7a60S60SagCagT22B.1.160.230.009662
ORF7a60S60SagCagT12B.1.3510.00003
ORF7a60S60SagCagT22B.1.4290.000047
ORF7a60S60SagCagT11A.10.000282
ORF7a60S60SagCagT11AY.1000.000046
ORF7a60S60SagCagT11AY.1080.001103
ORF7a60S60SagCagT11AY.1160.000287
ORF7a60S60SagCagT11AY.1170.000085
ORF7a60S60SagCagT11AY.260.000028
ORF7a60S60SagCagT11AY.270.000065
ORF7a60S60SagCagT11AY.3.10.000085
ORF7a60S60SagCagT11AY.39.10.00004
ORF7a60S60SagCagT11AY.4.20.000022
ORF7a60S60SagCagT11AY.4.50.000107
ORF7a60S60SagCagT11AY.450.000122
ORF7a60S60SagCagT11AY.46.20.000635
ORF7a60S60SagCagT11AY.46.40.000165
ORF7a60S60SagCagT11AY.750.000056
ORF7a60S60SagCagT11AY.850.000427
ORF7a60S60SagCagT11AY.980.000079
ORF7a60S60SagCagT11AY.98.10.000048
ORF7a60S60SagCagT11B.1.1.2650.003155
ORF7a60S60SagCagT11B.1.1.2840.000107
ORF7a60S60SagCagT11B.1.1110.001175
ORF7a60S60SagCagT11B.1.1600.000031
ORF7a60S60SagCagT11B.1.1770.000013
ORF7a60S60SagCagT11B.1.177.210.000076
ORF7a60S60SagCagT11B.1.258.170.000104
ORF7a60S60SagCagT11B.1.360.000146
ORF7a60S60SagCagT11B.1.3990.001934
ORF7a60S60SagCagT11B.1.4270.00005
ORF7a60S60SagCagT11B.1.4590.004082
ORF7a60S60SagCagT11B.1.5260.000024
ORF7a60S60SagCagT11B.40.002208
ORF7a60S60SagCagT11B.400.000364
ORF7a60S60SagCagT11P.1.140.000048