CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 60 & Codon = ag-

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a60S60del1delagCag-4151500.36144627571-27573

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a60S60del1agCag-150415All0.000029
ORF7a60S60del1agCag-12109B.1.1.70.000011
ORF7a60S60del1agCag-66103AY.40.000103
ORF7a60S60del1agCag-284AY.290.000032
ORF7a60S60del1agCag-1517AY.1030.000093
ORF7a60S60del1agCag-1515AY.1200.000558
ORF7a60S60del1agCag-412B.1.617.20.000015
ORF7a60S60del1agCag-56AY.70.00098
ORF7a60S60del1agCag-25B.1.20.000018
ORF7a60S60del1agCag-44AY.390.000099
ORF7a60S60del1agCag-23AY.1190.000071
ORF7a60S60del1agCag-33AY.260.000085
ORF7a60S60del1agCag-23AY.470.000062
ORF7a60S60del1agCag-13B.1.5260.000024
ORF7a60S60del1agCag-22AY.30.00002
ORF7a60S60del1agCag-22AY.4.20.000043
ORF7a60S60del1agCag-12AY.430.000004
ORF7a60S60del1agCag-22AY.440.000012
ORF7a60S60del1agCag-11AY.1000.000046
ORF7a60S60del1agCag-11AY.1170.000085
ORF7a60S60del1agCag-11AY.200.000039
ORF7a60S60del1agCag-11AY.460.000104
ORF7a60S60del1agCag-11AY.540.000095
ORF7a60S60del1agCag-11AY.7.10.000113
ORF7a60S60del1agCag-11AY.710.000475
ORF7a60S60del1agCag-11AY.820.001357
ORF7a60S60del1agCag-11AY.99.20.000092
ORF7a60S60del1agCag-11P.10.000016