CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 58 & Codon = tgT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a58C58CsyntgCtgT311311127565-27567

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a58C58CtgCtgT311311All0.000059
ORF7a58C58CtgCtgT5959AY.440.000359
ORF7a58C58CtgCtgT2727AY.40.000042
ORF7a58C58CtgCtgT2424B.1.1470.018141
ORF7a58C58CtgCtgT2121B.1.177.160.013953
ORF7a58C58CtgCtgT1818B.1.1.70.000016
ORF7a58C58CtgCtgT1717B.1.1600.00053
ORF7a58C58CtgCtgT1616AY.430.000071
ORF7a58C58CtgCtgT1515B.1.617.20.000056
ORF7a58C58CtgCtgT1212B.1.4290.000282
ORF7a58C58CtgCtgT66AY.1030.000037
ORF7a58C58CtgCtgT66B.1.5610.002382
ORF7a58C58CtgCtgT66D.20.00045
ORF7a58C58CtgCtgT55AY.1040.009921
ORF7a58C58CtgCtgT55B.1.2060.004078
ORF7a58C58CtgCtgT44A.2.30.018957
ORF7a58C58CtgCtgT44AY.1090.002959
ORF7a58C58CtgCtgT44AY.270.000259
ORF7a58C58CtgCtgT44AY.90.00027
ORF7a58C58CtgCtgT33AY.250.000018
ORF7a58C58CtgCtgT33B.10.000027
ORF7a58C58CtgCtgT33B.1.10.000054
ORF7a58C58CtgCtgT33B.1.2430.000209
ORF7a58C58CtgCtgT33B.1.438.10.000322
ORF7a58C58CtgCtgT33B.1.6090.001438
ORF7a58C58CtgCtgT220.111111
ORF7a58C58CtgCtgT22AY.470.000062
ORF7a58C58CtgCtgT22B.1.1.2840.000215
ORF7a58C58CtgCtgT22B.1.360.000292
ORF7a58C58CtgCtgT22P.1.120.000968
ORF7a58C58CtgCtgT11AY.1000.000046
ORF7a58C58CtgCtgT11AY.1020.000027
ORF7a58C58CtgCtgT11AY.1070.000466
ORF7a58C58CtgCtgT11AY.1190.000035
ORF7a58C58CtgCtgT11AY.290.000016
ORF7a58C58CtgCtgT11AY.330.000067
ORF7a58C58CtgCtgT11AY.39.10.00004
ORF7a58C58CtgCtgT11AY.4.20.000022
ORF7a58C58CtgCtgT11AY.4.40.000409
ORF7a58C58CtgCtgT11AY.420.00004
ORF7a58C58CtgCtgT11AY.460.000104
ORF7a58C58CtgCtgT11AY.50.000021
ORF7a58C58CtgCtgT11AY.590.00053
ORF7a58C58CtgCtgT11AY.750.000056
ORF7a58C58CtgCtgT11B.1.1.3650.005587
ORF7a58C58CtgCtgT11B.1.160.160.000929
ORF7a58C58CtgCtgT11B.1.177.510.004566
ORF7a58C58CtgCtgT11B.1.20.000009
ORF7a58C58CtgCtgT11B.1.2580.000067
ORF7a58C58CtgCtgT11B.1.258.90.005
ORF7a58C58CtgCtgT11B.1.3510.00003
ORF7a58C58CtgCtgT11B.1.36.290.000517
ORF7a58C58CtgCtgT11B.1.466.20.000391
ORF7a58C58CtgCtgT11B.1.5250.000113
ORF7a58C58CtgCtgT11B.1.6210.000089
ORF7a58C58CtgCtgT11C.36.30.000567
ORF7a58C58CtgCtgT11P.10.000016
ORF7a58C58CtgCtgT11P.1.100.000269
ORF7a58C58CtgCtgT11P.20.000187
ORF7a58C58CtgCtgT11Q.80.000165