CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 58 & Codon = tTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a58C58FnonsyntGctTc15332153240.99947827565-27567

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a58C58FtGctTc1532415332All0.002931
ORF7a58C58FtGctTc80568058AY.7.10.907923
ORF7a58C58FtGctTc47784778AY.70.936495
ORF7a58C58FtGctTc15811582AY.7.20.884228
ORF7a58C58FtGctTc276278B.1.617.20.001039
ORF7a58C58FtGctTc175175AY.40.000272
ORF7a58C58FtGctTc118118AY.420.004747
ORF7a58C58FtGctTc3737AY.60.001522
ORF7a58C58FtGctTc2929AY.1030.00018
ORF7a58C58FtGctTc1818AY.430.00008
ORF7a58C58FtGctTc1717AY.110.022758
ORF7a58C58FtGctTc1515B.1.1.70.000013
ORF7a58C58FtGctTc1414AY.290.000221
ORF7a58C58FtGctTc1313AY.1130.001851
ORF7a58C58FtGctTc1212AY.30.000119
ORF7a58C58FtGctTc1212AY.50.000248
ORF7a58C58FtGctTc1010AY.1020.000265
ORF7a58C58FtGctTc1010AY.880.008842
ORF7a58C58FtGctTc1010B.10.000092
ORF7a58C58FtGctTc99AY.1210.001218
ORF7a58C58FtGctTc69AY.250.000036
ORF7a58C58FtGctTc66AY.1160.001721
ORF7a58C58FtGctTc66AY.840.002625
ORF7a58C58FtGctTc66R.10.00054
ORF7a58C58FtGctTc55AY.1110.000916
ORF7a58C58FtGctTc55AY.200.000194
ORF7a58C58FtGctTc55AY.750.00028
ORF7a58C58FtGctTc55B.1.3960.003529
ORF7a58C58FtGctTc44AY.260.000113
ORF7a58C58FtGctTc44AY.580.00363
ORF7a58C58FtGctTc44B.1.3510.000119
ORF7a58C58FtGctTc33AY.1060.001005
ORF7a58C58FtGctTc33AY.4.30.002525
ORF7a58C58FtGctTc33AY.5.30.001012
ORF7a58C58FtGctTc22AY.1000.000092
ORF7a58C58FtGctTc22AY.1190.000071
ORF7a58C58FtGctTc22AY.120.000632
ORF7a58C58FtGctTc22AY.320.001065
ORF7a58C58FtGctTc22AY.390.000049
ORF7a58C58FtGctTc22AY.4.2.10.000298
ORF7a58C58FtGctTc22AY.450.000243
ORF7a58C58FtGctTc22AY.460.000208
ORF7a58C58FtGctTc22AY.46.40.000329
ORF7a58C58FtGctTc22AY.46.60.000144
ORF7a58C58FtGctTc22AY.490.00639
ORF7a58C58FtGctTc22AY.590.001059
ORF7a58C58FtGctTc22AY.640.00119
ORF7a58C58FtGctTc22AY.90.000135
ORF7a58C58FtGctTc22AY.9.20.000073
ORF7a58C58FtGctTc22AY.920.000575
ORF7a58C58FtGctTc22AY.980.000158
ORF7a58C58FtGctTc22AY.99.10.003106
ORF7a58C58FtGctTc22B.1.5260.000047
ORF7a58C58FtGctTc22P.10.000032
ORF7a58C58FtGctTc11A.2.40.003367
ORF7a58C58FtGctTc11AY.1170.000085
ORF7a58C58FtGctTc11AY.170.008197
ORF7a58C58FtGctTc11AY.230.00007
ORF7a58C58FtGctTc11AY.300.000396
ORF7a58C58FtGctTc11AY.380.000499
ORF7a58C58FtGctTc11AY.410.000294
ORF7a58C58FtGctTc11AY.440.000006
ORF7a58C58FtGctTc11AY.46.10.001027
ORF7a58C58FtGctTc11AY.46.20.000635
ORF7a58C58FtGctTc11AY.480.000465
ORF7a58C58FtGctTc11AY.560.001605
ORF7a58C58FtGctTc11AY.690.000187
ORF7a58C58FtGctTc11AY.860.00083
ORF7a58C58FtGctTc11AY.900.000684
ORF7a58C58FtGctTc11AY.950.000761
ORF7a58C58FtGctTc11AY.990.001049
ORF7a58C58FtGctTc11AY.99.20.000092
ORF7a58C58FtGctTc11AZ.20.000821
ORF7a58C58FtGctTc11B0.000128
ORF7a58C58FtGctTc11B.1.10.000018
ORF7a58C58FtGctTc11B.1.1.10.000327
ORF7a58C58FtGctTc11B.1.1.2010.02439
ORF7a58C58FtGctTc11B.1.1.2770.000759
ORF7a58C58FtGctTc11B.1.214.20.0006
ORF7a58C58FtGctTc11B.1.351.20.000303
ORF7a58C58FtGctTc11B.1.4530.003236
ORF7a58C58FtGctTc11B.1.5510.00129
ORF7a58C58FtGctTc11P.20.000187