CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 58 & Codon = Agc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a58C58SnonsynTgcAgc118750.63559327565-27567

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a58C58STgcAgc75118All0.000014
ORF7a58C58STgcAgc3036B.1.1.70.000027
ORF7a58C58STgcAgc99AY.40.000014
ORF7a58C58STgcAgc17AY.250.000006
ORF7a58C58STgcAgc37B.1.617.20.000011
ORF7a58C58STgcAgc66AY.290.000095
ORF7a58C58STgcAgc240.111111
ORF7a58C58STgcAgc14B.1.10.000018
ORF7a58C58STgcAgc34B.1.1770.00004
ORF7a58C58STgcAgc33AY.260.000085
ORF7a58C58STgcAgc33AY.3.10.000256
ORF7a58C58STgcAgc23B.10.000018
ORF7a58C58STgcAgc11AY.1020.000027
ORF7a58C58STgcAgc11AY.1030.000006
ORF7a58C58STgcAgc11AY.1060.000335
ORF7a58C58STgcAgc11AY.1200.000037
ORF7a58C58STgcAgc11AY.230.00007
ORF7a58C58STgcAgc11B.1.1.10.000327
ORF7a58C58STgcAgc11B.1.1.5190.00004
ORF7a58C58STgcAgc11B.1.177.120.000152
ORF7a58C58STgcAgc11B.1.177.330.001645
ORF7a58C58STgcAgc11B.1.20.000009
ORF7a58C58STgcAgc11P.1.140.000048
ORF7a58C58STgcAgc11Q.10.000126