CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 58

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a58C58deldelTGC---2842928429127565-27567
ORF7a58C58FnonsyntGctTc15332153240.99947827565-27567
ORF7a58C58FnonsyntGCtTT1533280.00052178527565-27567
ORF7a58C58CsyntgCtgT311311127565-27567
ORF7a58C58del2deltGCt--2582150.83333327565-27567
ORF7a58C58del2delTGc--c258400.15503927565-27567
ORF7a58C58del2delTGC--N25820.0077519427565-27567
ORF7a58C58del2delTGC--T25810.0038759727565-27567
ORF7a58C58GnonsynTgcGgc1721700.98837227565-27567
ORF7a58C58GnonsynTgCGgG17210.0058139527565-27567
ORF7a58C58GnonsynTgCGgT17210.0058139527565-27567
ORF7a58C58SnonsynTgcAgc118750.63559327565-27567
ORF7a58C58SnonsyntGCtCT118190.16101727565-27567
ORF7a58C58SnonsynTgCAgT118120.10169527565-27567
ORF7a58C58SnonsyntGctCc118110.093220327565-27567
ORF7a58C58SnonsyntGCtCG11810.0084745827565-27567
ORF7a58C58del1deltgCtg-82660.80487827565-27567
ORF7a58C58del1delTGc-Tc8250.060975627565-27567
ORF7a58C58del1delTgc-gc8250.060975627565-27567
ORF7a58C58del1delTGC-NN8240.048780527565-27567
ORF7a58C58del1deltGct-c8210.012195127565-27567
ORF7a58C58del1delTGCY-T8210.012195127565-27567
ORF7a58C58YnonsyntGctAc62520.8387127565-27567
ORF7a58C58YnonsyntGCtAT62100.1612927565-27567
ORF7a58C58RnonsynTgcCgc41380.92682927565-27567
ORF7a58C58RnonsynTgCAgG4110.024390227565-27567
ORF7a58C58RnonsynTgCCgT4110.024390227565-27567
ORF7a58C58RnonsynTgCCgA4110.024390227565-27567
ORF7a58C58XnonsyntgCtgA32270.8437527565-27567
ORF7a58C58XnonsyntGCtAA3250.1562527565-27567
ORF7a58C58LnonsynTGCCTT1780.47058827565-27567
ORF7a58C58LnonsyntGCtTA1730.17647127565-27567
ORF7a58C58LnonsyntGCtTG1720.11764727565-27567
ORF7a58C58LnonsynTGCCTA1720.11764727565-27567
ORF7a58C58LnonsynTGcCTc1720.11764727565-27567
ORF7a58C58InonsynTGcATc15100.66666727565-27567
ORF7a58C58InonsynTGCATT1550.33333327565-27567
ORF7a58C58NnonsynTGcAAc960.66666727565-27567
ORF7a58C58NnonsynTGCAAT930.33333327565-27567
ORF7a58C58TnonsynTGcACc850.62527565-27567
ORF7a58C58TnonsynTGCACT830.37527565-27567
ORF7a58C58DnonsynTGcGAc66127565-27567
ORF7a58C58HnonsynTGCCAT530.627565-27567
ORF7a58C58HnonsynTGcCAc520.427565-27567
ORF7a58C58WnonsyntgCtgG44127565-27567
ORF7a58C58PnonsynTGcCCc320.66666727565-27567
ORF7a58C58PnonsynTGCCCT310.33333327565-27567
ORF7a58C58QnonsynTGCCAG210.527565-27567
ORF7a58C58VnonsynTGCGTT210.527565-27567
ORF7a58C58VnonsynTGCGTG210.527565-27567
ORF7a58C58QnonsynTGCCAA210.527565-27567
ORF7a58C58MnonsynTGCATG11127565-27567
ORF7a58C58AnonsynTGCGCT11127565-27567

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a58C58delTGC---2842928429All0.005437
ORF7a58C58FtGctTc1532415332All0.002931
ORF7a58C58FtGCtTT815332All0.000002
ORF7a58C58delTGC---1183211832AY.40.018416
ORF7a58C58FtGctTc80568058AY.7.10.907923
ORF7a58C58FtGCtTT28058AY.7.10.000225
ORF7a58C58FtGctTc47784778AY.70.936495
ORF7a58C58delTGC---31993199B.1.617.20.012046
ORF7a58C58delTGC---20222022B.1.1.70.00181
ORF7a58C58delTGC---16661666AY.120.10.534831
ORF7a58C58FtGctTc15811582AY.7.20.884228
ORF7a58C58FtGCtTT11582AY.7.20.000559
ORF7a58C58delTGC---15271527AY.250.009185
ORF7a58C58delTGC---857857AY.430.003797
ORF7a58C58delTGC---609609AY.1030.003781
ORF7a58C58delTGC---437437AY.440.00266
ORF7a58C58delTGC---435435AY.30.004327
ORF7a58C58delTGC---433433AY.260.012258
ORF7a58C58delTGC---380380AY.390.00939
ORF7a58C58delTGC---314314AY.1020.008325
ORF7a58C58CtgCtgT311311All0.000059
ORF7a58C58FtGctTc276278B.1.617.20.001039
ORF7a58C58FtGCtTT2278B.1.617.20.000008
ORF7a58C58delTGC---259259AY.290.004085
ORF7a58C58del2tGCt--215258All0.000041
ORF7a58C58del2TGc--c40258All0.000008
ORF7a58C58del2TGC--N2258All0
ORF7a58C58del2TGC--T1258All0
ORF7a58C58delTGC---202202B.1.3510.006005
ORF7a58C58delTGC---199199AY.1200.007399
ORF7a58C58delTGC---193193AY.4.20.004186
ORF7a58C58delTGC---184184B.1.177.210.014071
ORF7a58C58FtGctTc175175AY.40.000272
ORF7a58C58GTgcGgc170172All0.000033
ORF7a58C58GTgCGgG1172All0
ORF7a58C58GTgCGgT1172All0
ORF7a58C58delTGC---172172AY.980.013587
ORF7a58C58GTgcGgc160160B.1.1.70.000143
ORF7a58C58delTGC---120120AY.1190.004237
ORF7a58C58STgcAgc75118All0.000014
ORF7a58C58StGCtCT19118All0.000004
ORF7a58C58STgCAgT12118All0.000002
ORF7a58C58StGctCc11118All0.000002
ORF7a58C58StGCtCG1118All0
ORF7a58C58FtGctTc118118AY.420.004747
ORF7a58C58delTGC---118118AY.7.10.013299
ORF7a58C58delTGC---117117AY.470.003639
ORF7a58C58delTGC---117117B.10.001072
ORF7a58C58delTGC---116116AY.1000.005337
ORF7a58C58delTGC---116116B.1.5260.002727
ORF7a58C58delTGC---9797B.1.1770.001277
ORF7a58C58delTGC---8989AY.46.40.014641
ORF7a58C58del2tGCt--7883B.1.1.70.00007
ORF7a58C58del2TGc--c383B.1.1.70.000003
ORF7a58C58del2TGC--N183B.1.1.70.000001
ORF7a58C58del2TGC--T183B.1.1.70.000001
ORF7a58C58del1tgCtg-6682All0.000013
ORF7a58C58del1Tgc-gc582All0.000001
ORF7a58C58del1TGc-Tc582All0.000001
ORF7a58C58del1TGC-NN482All0.000001
ORF7a58C58del1TGCY-T182All0
ORF7a58C58del1tGct-c182All0
ORF7a58C58delTGC---8080AY.330.005342
ORF7a58C58delTGC---8080B.1.20.000704
ORF7a58C58delTGC---7272AY.46.60.005199
ORF7a58C58delTGC---7070AY.50.001445
ORF7a58C58YtGctAc5262All0.00001
ORF7a58C58YtGCtAT1062All0.000002
ORF7a58C58delTGC---6262AY.3.10.005286
ORF7a58C58delTGC---6060AY.450.007301
ORF7a58C58CtgCtgT5959AY.440.000359
ORF7a58C58delTGC---5858AY.39.10.002298
ORF7a58C58delTGC---5757AY.750.003193
ORF7a58C58delTGC---5656AY.1130.007974
ORF7a58C58delTGC---5656AY.420.002253
ORF7a58C58delTGC---5454AY.60.002221
ORF7a58C58delTGC---5252AY.230.003627
ORF7a58C58delTGC---5151AY.200.001982
ORF7a58C58delTGC---5050AY.460.005204
ORF7a58C58delTGC---4949B.1.6210.004337
ORF7a58C58delTGC---4949P.10.000772
ORF7a58C58delTGC---4747AY.540.004481
ORF7a58C58delTGC---4747B.1.1.2840.005048
ORF7a58C58delTGC---4545AY.1070.020969
ORF7a58C58delTGC---4444AY.130.007083
ORF7a58C58RTgcCgc3841All0.000007
ORF7a58C58RTgCCgT141All0
ORF7a58C58RTgCCgA141All0
ORF7a58C58RTgCAgG141All0
ORF7a58C58FtGctTc3737AY.60.001522
ORF7a58C58delTGC---3737AY.98.10.001792
ORF7a58C58delTGC---3636AY.1100.004057
ORF7a58C58delTGC---3636AY.1180.002255
ORF7a58C58STgcAgc3036B.1.1.70.000027
ORF7a58C58StGctCc336B.1.1.70.000003
ORF7a58C58StGCtCT236B.1.1.70.000002
ORF7a58C58STgCAgT136B.1.1.70.000001
ORF7a58C58XtgCtgA2732All0.000005
ORF7a58C58XtGCtAA532All0.000001
ORF7a58C58delTGC---3232AY.90.002163
ORF7a58C58delTGC---3131AY.340.003006
ORF7a58C58delTGC---3131AY.70.006076
ORF7a58C58delTGC---3030AY.910.021914
ORF7a58C58delTGC---3030B.1.10.000544
ORF7a58C58delTGC---3030B.1.1.2140.001664
ORF7a58C58FtGctTc2929AY.1030.00018
ORF7a58C58delTGC---2929AY.9.20.001065
ORF7a58C58delTGC---2828AY.1170.002366
ORF7a58C58del1tgCtg-2628AY.40.00004
ORF7a58C58del2tGCt--2228AY.40.000034
ORF7a58C58del2TGc--c528AY.40.000008
ORF7a58C58del1Tgc-gc128AY.40.000002
ORF7a58C58del2TGC--N128AY.40.000002
ORF7a58C58del1TGC-NN128AY.40.000002
ORF7a58C58delTGC---2828AY.600.026266
ORF7a58C58delTGC---2828AY.99.20.00258
ORF7a58C58CtgCtgT2727AY.40.000042
ORF7a58C58delTGC---2525AY.190.028506
ORF7a58C58delTGC---2424AY.7.20.013423
ORF7a58C58delTGC---2424AY.9.10.002009
ORF7a58C58CtgCtgT2424B.1.1470.018141
ORF7a58C58delTGC---2323AY.300.009102
ORF7a58C58delTGC---2121AY.360.003112
ORF7a58C58delTGC---2121AY.610.0022
ORF7a58C58CtgCtgT2121B.1.177.160.013953
ORF7a58C58delTGC---2020AY.1210.002706
ORF7a58C58delTGC---1919AY.1060.006363
ORF7a58C58YtGctAc1919B.1.1.70.000017
ORF7a58C58delTGC---1919B.1.6370.001388
ORF7a58C58FtGctTc1818AY.430.00008
ORF7a58C58CtgCtgT1818B.1.1.70.000016
ORF7a58C58LTGCCTT817All0.000002
ORF7a58C58LtGCtTA317All0.000001
ORF7a58C58LtGCtTG217All0
ORF7a58C58LTGCCTA217All0
ORF7a58C58LTGcCTc217All0
ORF7a58C58FtGctTc1717AY.110.022758
ORF7a58C58delTGC---1717AY.4.50.001827
ORF7a58C58delTGC---1717AY.740.001966
ORF7a58C58CtgCtgT1717B.1.1600.00053
ORF7a58C58delTGC---1717B.1.4270.000858
ORF7a58C58delTGC---1717B.1.4290.0004
ORF7a58C58del2tGCt--1517B.1.5260.000353
ORF7a58C58del2TGc--c217B.1.5260.000047
ORF7a58C58delTGC---1717R.10.00153
ORF7a58C58delTGC---1616AY.10.006332
ORF7a58C58CtgCtgT1616AY.430.000071
ORF7a58C58delTGC---1616B.1.1600.000499
ORF7a58C58delTGC---1616C.370.001857
ORF7a58C58ITGcATc1015All0.000002
ORF7a58C58ITGCATT515All0.000001
ORF7a58C58delTGC---1515AY.1160.004302
ORF7a58C58delTGC---1515B.1.1.2220.00306
ORF7a58C58FtGctTc1515B.1.1.70.000013
ORF7a58C58CtgCtgT1515B.1.617.20.000056
ORF7a58C58delTGC---1414AY.1110.002564
ORF7a58C58delTGC---1414AY.1140.003235
ORF7a58C58FtGctTc1414AY.290.000221
ORF7a58C58delTGC---1414AY.46.20.008895
ORF7a58C58delTGC---1414B.1.1.2580.045603
ORF7a58C58delTGC---1414B.1.2430.000974
ORF7a58C58delTGC---1414B.1.5960.00122
ORF7a58C58FtGctTc1313AY.1130.001851
ORF7a58C58delTGC---1313AY.140.001144
ORF7a58C58del2tGCt--1313AY.250.000078
ORF7a58C58del2tGCt--1013AY.30.000099
ORF7a58C58del2TGc--c313AY.30.00003
ORF7a58C58delTGC---1313AY.370.004109
ORF7a58C58del1tgCtg-1313AY.440.000079
ORF7a58C58delTGC---1313AY.680.003559
ORF7a58C58del2tGCt--1213B.1.1770.000158
ORF7a58C58del2TGc--c113B.1.1770.000013
ORF7a58C58FtGctTc1212AY.30.000119
ORF7a58C58FtGctTc1212AY.50.000248
ORF7a58C58delTGC---1212AY.840.005249
ORF7a58C58del2tGCt--1212B.1.214.20.007194
ORF7a58C58delTGC---1212B.1.3240.019262
ORF7a58C58CtgCtgT1212B.1.4290.000282
ORF7a58C58delTGC---1111AY.4.2.10.001639
ORF7a58C58delTGC---1111AY.870.009159
ORF7a58C58delTGC---1111AY.990.011542
ORF7a58C58FtGctTc1010AY.1020.000265
ORF7a58C58delTGC---1010AY.120.003161
ORF7a58C58RTgcCgc910AY.250.000054
ORF7a58C58ITGcATc810AY.250.000048
ORF7a58C58ITGCATT210AY.250.000012
ORF7a58C58RTgCAgG110AY.250.000006
ORF7a58C58del2tGCt--1010AY.290.000158
ORF7a58C58delTGC---1010AY.350.00233
ORF7a58C58delTGC---1010AY.5.40.002767
ORF7a58C58FtGctTc1010AY.880.008842
ORF7a58C58delTGC---1010AY.900.006845
ORF7a58C58FtGctTc1010B.10.000092
ORF7a58C58del2tGCt--1010B.1.177.560.006676
ORF7a58C58delTGC---1010B.1.5250.001132
ORF7a58C58delTGC---1010Q.80.001649
ORF7a58C58NTGcAAc69All0.000001
ORF7a58C58NTGCAAT39All0.000001
ORF7a58C58delTGC---99AY.1090.006657
ORF7a58C58FtGctTc99AY.1210.001218
ORF7a58C58FtGctTc69AY.250.000036
ORF7a58C58FtGCtTT39AY.250.000018
ORF7a58C58STgcAgc99AY.40.000014
ORF7a58C58delTGC---99AY.620.003922
ORF7a58C58delTGC---99B.1.1.5190.000357
ORF7a58C58delTGC---99B.1.258.90.045
ORF7a58C58del2tGCt--59B.1.617.20.000019
ORF7a58C58del2TGc--c49B.1.617.20.000015
ORF7a58C58delTGC---99L.10.017143
ORF7a58C58TTGcACc58All0.000001
ORF7a58C58TTGCACT38All0.000001
ORF7a58C58delTGC---88AY.100.00424
ORF7a58C58delTGC---88AY.270.000518
ORF7a58C58delTGC---88AY.29.10.001764
ORF7a58C58delTGC---88B.1.1.2310.024768
ORF7a58C58STgCAgT78B.1.3510.000208
ORF7a58C58StGCtCT18B.1.3510.00003
ORF7a58C58delTGC---88P.1.140.000382
ORF7a58C58delTGC---88P.1.150.001859
ORF7a58C58YtGctAc57AY.250.00003
ORF7a58C58StGctCc37AY.250.000018
ORF7a58C58YtGCtAT27AY.250.000012
ORF7a58C58StGCtCT27AY.250.000012
ORF7a58C58STgCAgT17AY.250.000006
ORF7a58C58STgcAgc17AY.250.000006
ORF7a58C58RTgcCgc77AY.40.000011
ORF7a58C58del2tGCt--77AY.440.000043
ORF7a58C58delTGC---77AY.46.50.001389
ORF7a58C58delTGC---77AY.710.003325
ORF7a58C58delTGC---77AY.850.00299
ORF7a58C58delTGC---77B.1.214.20.004197
ORF7a58C58YtGctAc47B.1.617.20.000015
ORF7a58C58STgcAgc37B.1.617.20.000011
ORF7a58C58YtGCtAT37B.1.617.20.000011
ORF7a58C58StGctCc27B.1.617.20.000008
ORF7a58C58STgCAgT17B.1.617.20.000004
ORF7a58C58StGCtCT17B.1.617.20.000004
ORF7a58C58DTGcGAc66All0.000001
ORF7a58C58CtgCtgT66AY.1030.000037
ORF7a58C58delTGC---66AY.1080.006615
ORF7a58C58FtGctTc66AY.1160.001721
ORF7a58C58STgcAgc66AY.290.000095
ORF7a58C58delTGC---66AY.46.10.00616
ORF7a58C58del2TGc--c56AY.50.000103
ORF7a58C58del2tGCt--16AY.50.000021
ORF7a58C58delTGC---66AY.650.003198
ORF7a58C58FtGctTc66AY.840.002625
ORF7a58C58delTGC---66AY.920.001724
ORF7a58C58RTgcCgc66B.1.1.70.000005
ORF7a58C58XtgCtgA66B.1.1.70.000005
ORF7a58C58CtgCtgT66B.1.5610.002382
ORF7a58C58CtgCtgT66D.20.00045
ORF7a58C58delTGC---66Q.10.000758
ORF7a58C58FtGctTc66R.10.00054
ORF7a58C58HTGCCAT35All0.000001
ORF7a58C58HTGcCAc25All0
ORF7a58C58CtgCtgT55AY.1040.009921
ORF7a58C58FtGctTc55AY.1110.000916
ORF7a58C58delTGC---55AY.160.001898
ORF7a58C58FtGctTc55AY.200.000194
ORF7a58C58LtGCtTA15AY.250.000006
ORF7a58C58LTGcCTc15AY.250.000006
ORF7a58C58LTGCCTT15AY.250.000006
ORF7a58C58LtGCtTG15AY.250.000006
ORF7a58C58LTGCCTA15AY.250.000006
ORF7a58C58delTGC---55AY.4.40.002046
ORF7a58C58delTGC---55AY.480.002326
ORF7a58C58delTGC---55AY.520.004072
ORF7a58C58delTGC---55AY.660.005348
ORF7a58C58del1TGc-Tc55AY.70.00098
ORF7a58C58FtGctTc55AY.750.00028
ORF7a58C58delTGC---55AY.800.005643
ORF7a58C58delTGC---55AY.950.003805
ORF7a58C58delTGC---55B.1.1.560.089286
ORF7a58C58CtgCtgT55B.1.2060.004078
ORF7a58C58delTGC---55B.1.3750.004098
ORF7a58C58FtGctTc55B.1.3960.003529
ORF7a58C58delTGC---55B.1.5950.001305
ORF7a58C58LTGCCTT45B.1.617.20.000015
ORF7a58C58ITGCATT35B.1.617.20.000011
ORF7a58C58ITGcATc25B.1.617.20.000008
ORF7a58C58del1Tgc-gc15B.1.617.20.000004
ORF7a58C58del1TGC-NN15B.1.617.20.000004
ORF7a58C58del1tgCtg-15B.1.617.20.000004
ORF7a58C58del1TGCY-T15B.1.617.20.000004
ORF7a58C58del1tGct-c15B.1.617.20.000004
ORF7a58C58LTGcCTc15B.1.617.20.000004
ORF7a58C58delTGC---55B.1.700.121951
ORF7a58C58delTGC---55P.20.000933
ORF7a58C58STgCAgT240.111111
ORF7a58C58STgcAgc240.111111
ORF7a58C58delTGC---44A0.001548
ORF7a58C58CtgCtgT44A.2.30.018957
ORF7a58C58WtgCtgG44All0.000001
ORF7a58C58CtgCtgT44AY.1090.002959
ORF7a58C58XtgCtgA44AY.1180.000251
ORF7a58C58TTGcACc24AY.250.000012
ORF7a58C58TTGCACT24AY.250.000012
ORF7a58C58FtGctTc44AY.260.000113
ORF7a58C58CtgCtgT44AY.270.000259
ORF7a58C58delTGC---44AY.34.10.00204
ORF7a58C58FtGctTc44AY.580.00363
ORF7a58C58delTGC---44AY.590.002119
ORF7a58C58delTGC---44AY.730.002661
ORF7a58C58CtgCtgT44AY.90.00027
ORF7a58C58StGCtCT34B.1.10.000054
ORF7a58C58STgcAgc14B.1.10.000018
ORF7a58C58STgcAgc34B.1.1770.00004
ORF7a58C58StGCtCT14B.1.1770.000013
ORF7a58C58delTGC---44B.1.2340.000528
ORF7a58C58FtGctTc44B.1.3510.000119
ORF7a58C58delTGC---44D.20.0003
ORF7a58C58PTGcCCc23All0
ORF7a58C58PTGCCCT13All0
ORF7a58C58delTGC---33AY.1010.001471
ORF7a58C58del2TGc--c23AY.1020.000053
ORF7a58C58del2tGCt--13AY.1020.000027
ORF7a58C58del2TGc--c23AY.1030.000012
ORF7a58C58del2tGCt--13AY.1030.000006
ORF7a58C58FtGctTc33AY.1060.001005
ORF7a58C58delTGC---33AY.240.001293
ORF7a58C58CtgCtgT33AY.250.000018
ORF7a58C58STgcAgc33AY.260.000085
ORF7a58C58STgcAgc33AY.3.10.000256
ORF7a58C58RTgcCgc33AY.34.10.00153
ORF7a58C58del1tgCtg-33AY.390.000074
ORF7a58C58YtGctAc33AY.40.000005
ORF7a58C58delTGC---33AY.4.30.002525
ORF7a58C58FtGctTc33AY.4.30.002525
ORF7a58C58delTGC---33AY.400.002893
ORF7a58C58delTGC---33AY.410.000882
ORF7a58C58del2tGCt--23AY.430.000009
ORF7a58C58del2TGc--c13AY.430.000004
ORF7a58C58FtGctTc33AY.5.30.001012
ORF7a58C58delTGC---33AY.5.30.001012
ORF7a58C58delTGC---33AY.530.000863
ORF7a58C58RTgcCgc33AY.540.000286
ORF7a58C58delTGC---33AY.690.00056
ORF7a58C58del2TGc--c33AY.70.000588
ORF7a58C58delTGC---33AY.75.10.000541
ORF7a58C58delTGC---33AY.790.003632
ORF7a58C58delTGC---33AY.860.00249
ORF7a58C58delTGC---33AY.880.002653
ORF7a58C58delTGC---33AY.930.000819
ORF7a58C58RTgcCgc33B.10.000027
ORF7a58C58CtgCtgT33B.10.000027
ORF7a58C58STgcAgc23B.10.000018
ORF7a58C58StGCtCT13B.10.000009
ORF7a58C58CtgCtgT33B.1.10.000054
ORF7a58C58delTGC---33B.1.1.1210.007282
ORF7a58C58delTGC---33B.1.1.250.001706
ORF7a58C58delTGC---33B.1.1.3180.000905
ORF7a58C58delTGC---33B.1.160.160.002788
ORF7a58C58YtGCtAT33B.1.177.210.000229
ORF7a58C58XtGCtAA23B.1.177.210.000153
ORF7a58C58PTGcCCc23B.1.177.210.000153
ORF7a58C58XtgCtgA13B.1.177.210.000076
ORF7a58C58PTGCCCT13B.1.177.210.000076
ORF7a58C58delTGC---33B.1.177.570.000843
ORF7a58C58delTGC---33B.1.177.60.00293
ORF7a58C58delTGC---33B.1.177.600.000655
ORF7a58C58delTGC---33B.1.177.810.000568
ORF7a58C58CtgCtgT33B.1.2430.000209
ORF7a58C58delTGC---33B.1.2580.0002
ORF7a58C58delTGC---33B.1.351.20.000908
ORF7a58C58delTGC---33B.1.360.000438
ORF7a58C58CtgCtgT33B.1.438.10.000322
ORF7a58C58delTGC---33B.1.5750.00091
ORF7a58C58delTGC---33B.1.5820.001472
ORF7a58C58CtgCtgT33B.1.6090.001438
ORF7a58C58XtGCtAA23B.1.617.20.000008
ORF7a58C58TTGcACc23B.1.617.20.000008
ORF7a58C58TTGCACT13B.1.617.20.000004
ORF7a58C58XtgCtgA13B.1.617.20.000004
ORF7a58C58delTGC---33B.1.6260.017143
ORF7a58C58delTGC---33P.1.160.001122
ORF7a58C58CtgCtgT220.111111
ORF7a58C58NTGcAAc220.111111
ORF7a58C58delTGC---22A.280.005291
ORF7a58C58delTGC---22AD.20.000438
ORF7a58C58QTGCCAA12All0
ORF7a58C58VTGCGTG12All0
ORF7a58C58VTGCGTT12All0
ORF7a58C58QTGCCAG12All0
ORF7a58C58FtGctTc22AY.1000.000092
ORF7a58C58del1tgCtg-22AY.1100.000225
ORF7a58C58delTGC---22AY.116.10.000623
ORF7a58C58FtGctTc22AY.1190.000071
ORF7a58C58FtGctTc22AY.120.000632
ORF7a58C58delTGC---22AY.120.20.002571
ORF7a58C58delTGC---22AY.120.2.10.000997
ORF7a58C58del2tGCt--22AY.1210.000271
ORF7a58C58delTGC---22AY.20.000712
ORF7a58C58delTGC---22AY.220.004184
ORF7a58C58NTGcAAc12AY.250.000006
ORF7a58C58HTGCCAT12AY.250.000006
ORF7a58C58NTGCAAT12AY.250.000006
ORF7a58C58VTGCGTT12AY.250.000006
ORF7a58C58VTGCGTG12AY.250.000006
ORF7a58C58GTgCGgT12AY.250.000006
ORF7a58C58GTgCGgG12AY.250.000006
ORF7a58C58HTGcCAc12AY.250.000006
ORF7a58C58del2tGCt--12AY.260.000028
ORF7a58C58del2TGc--c12AY.260.000028
ORF7a58C58del1tgCtg-22AY.30.00002
ORF7a58C58XtgCtgA22AY.30.00002
ORF7a58C58FtGctTc22AY.320.001065
ORF7a58C58YtGctAc22AY.360.000296
ORF7a58C58FtGctTc22AY.390.000049
ORF7a58C58delTGC---22AY.39.20.003082
ORF7a58C58XtgCtgA22AY.40.000003
ORF7a58C58FtGctTc22AY.4.2.10.000298
ORF7a58C58RTgcCgc22AY.430.000009
ORF7a58C58del1tgCtg-12AY.430.000004
ORF7a58C58del1Tgc-gc12AY.430.000004
ORF7a58C58YtGctAc22AY.440.000012
ORF7a58C58XtgCtgA22AY.440.000012
ORF7a58C58FtGctTc22AY.450.000243
ORF7a58C58del2TGc--c22AY.460.000208
ORF7a58C58FtGctTc22AY.460.000208
ORF7a58C58FtGctTc22AY.46.40.000329
ORF7a58C58FtGctTc22AY.46.60.000144
ORF7a58C58CtgCtgT22AY.470.000062
ORF7a58C58del1tgCtg-22AY.470.000062
ORF7a58C58FtGctTc22AY.490.00639
ORF7a58C58delTGC---22AY.490.00639
ORF7a58C58delTGC---22AY.510.001818
ORF7a58C58delTGC---22AY.570.001312
ORF7a58C58FtGctTc22AY.590.001059
ORF7a58C58delTGC---22AY.640.00119
ORF7a58C58FtGctTc22AY.640.00119
ORF7a58C58delTGC---22AY.700.000417
ORF7a58C58delTGC---22AY.80.001212
ORF7a58C58FtGctTc22AY.90.000135
ORF7a58C58FtGctTc22AY.9.20.000073
ORF7a58C58FtGctTc22AY.920.000575
ORF7a58C58FtGctTc22AY.980.000158
ORF7a58C58FtGctTc22AY.99.10.003106
ORF7a58C58XtgCtgA22B.10.000018
ORF7a58C58del2tGCt--22B.10.000018
ORF7a58C58YtGCtAT12B.10.000009
ORF7a58C58YtGctAc12B.10.000009
ORF7a58C58delTGC---22B.1.1.10.000653
ORF7a58C58del1tgCtg-22B.1.1.1700.002494
ORF7a58C58del1tgCtg-22B.1.1.2140.000111
ORF7a58C58delTGC---22B.1.1.2200.003717
ORF7a58C58CtgCtgT22B.1.1.2840.000215
ORF7a58C58delTGC---22B.1.1.370.000386
ORF7a58C58delTGC---22B.1.1.3720.001377
ORF7a58C58delTGC---22B.1.1.5210.010695
ORF7a58C58del1tgCtg-22B.1.1.70.000002
ORF7a58C58DTGcGAc22B.1.1.70.000002
ORF7a58C58NTGcAAc22B.1.1.70.000002
ORF7a58C58LtGCtTA12B.1.1.70.000001
ORF7a58C58LtGCtTG12B.1.1.70.000001
ORF7a58C58delTGC---22B.1.177.100.001756
ORF7a58C58delTGC---22B.1.177.160.001329
ORF7a58C58HTGCCAT22B.1.177.210.000153
ORF7a58C58LTGCCTT12B.1.177.210.000076
ORF7a58C58LTGCCTA12B.1.177.210.000076
ORF7a58C58GTgcGgc22B.1.177.40.000422
ORF7a58C58delTGC---22B.1.177.430.002954
ORF7a58C58delTGC---22B.1.177.550.004662
ORF7a58C58delTGC---22B.1.177.860.000367
ORF7a58C58del1tgCtg-22B.1.1900.02
ORF7a58C58delTGC---22B.1.2210.000142
ORF7a58C58delTGC---22B.1.258.110.000793
ORF7a58C58delTGC---22B.1.2640.024691
ORF7a58C58delTGC---22B.1.3110.000549
ORF7a58C58CtgCtgT22B.1.360.000292
ORF7a58C58StGCtCT22B.1.36.10.002281
ORF7a58C58delTGC---22B.1.3690.00057
ORF7a58C58delTGC---22B.1.416.10.003125
ORF7a58C58delTGC---22B.1.4700.002809
ORF7a58C58FtGctTc22B.1.5260.000047
ORF7a58C58YtGctAc22B.1.6090.000959
ORF7a58C58NTGCAAT12B.1.617.20.000004
ORF7a58C58NTGcAAc12B.1.617.20.000004
ORF7a58C58delTGC---22B.1.617.30.00597
ORF7a58C58delTGC---22B.1.621.10.001012
ORF7a58C58delTGC---22C.36.30.001134
ORF7a58C58FtGctTc22P.10.000032
ORF7a58C58CtgCtgT22P.1.120.000968
ORF7a58C58delTGC---22P.1.17.10.00175
ORF7a58C58delTGC---22P.1.20.002312
ORF7a58C58GTgcGgc22Q.80.00033
ORF7a58C58delTGC---11A.10.000282
ORF7a58C58FtGctTc11A.2.40.003367
ORF7a58C58delTGC---11A.2.5.30.010309
ORF7a58C58delTGC---11A.23.10.000704
ORF7a58C58ATGCGCT11All0
ORF7a58C58MTGCATG11All0
ORF7a58C58delTGC---11AU.30.00211
ORF7a58C58StGctCc11AY.10.000396
ORF7a58C58CtgCtgT11AY.1000.000046
ORF7a58C58CtgCtgT11AY.1020.000027
ORF7a58C58STgcAgc11AY.1020.000027
ORF7a58C58YtGctAc11AY.1030.000006
ORF7a58C58GTgcGgc11AY.1030.000006
ORF7a58C58del1tgCtg-11AY.1030.000006
ORF7a58C58STgcAgc11AY.1030.000006
ORF7a58C58delTGC---11AY.1040.001984
ORF7a58C58delTGC---11AY.1050.000643
ORF7a58C58STgcAgc11AY.1060.000335
ORF7a58C58CtgCtgT11AY.1070.000466
ORF7a58C58delTGC---11AY.110.001339
ORF7a58C58DTGcGAc11AY.1100.000113
ORF7a58C58GTgcGgc11AY.1110.000183
ORF7a58C58del2tGCt--11AY.1130.000142
ORF7a58C58FtGctTc11AY.1170.000085
ORF7a58C58del2tGCt--11AY.1170.000085
ORF7a58C58YtGctAc11AY.1190.000035
ORF7a58C58CtgCtgT11AY.1190.000035
ORF7a58C58STgcAgc11AY.1200.000037
ORF7a58C58del1tgCtg-11AY.1200.000037
ORF7a58C58YtGctAc11AY.140.000088
ORF7a58C58del2TGc--c11AY.140.000088
ORF7a58C58FtGctTc11AY.170.008197
ORF7a58C58del2TGc--c11AY.230.00007
ORF7a58C58STgcAgc11AY.230.00007
ORF7a58C58FtGctTc11AY.230.00007
ORF7a58C58MTGCATG11AY.250.000006
ORF7a58C58XtGCtAA11AY.250.000006
ORF7a58C58QTGCCAA11AY.250.000006
ORF7a58C58del1Tgc-gc11AY.250.000006
ORF7a58C58WtgCtgG11AY.250.000006
ORF7a58C58RTgCCgT11AY.260.000028
ORF7a58C58GTgcGgc11AY.270.000065
ORF7a58C58CtgCtgT11AY.290.000016
ORF7a58C58RTgcCgc11AY.30.00001
ORF7a58C58del1TGC-NN11AY.3.10.000085
ORF7a58C58FtGctTc11AY.300.000396
ORF7a58C58delTGC---11AY.320.000532
ORF7a58C58CtgCtgT11AY.330.000067
ORF7a58C58del1tgCtg-11AY.340.000097
ORF7a58C58del1tgCtg-11AY.360.000148
ORF7a58C58FtGctTc11AY.380.000499
ORF7a58C58delTGC---11AY.380.000499
ORF7a58C58DTGcGAc11AY.390.000025
ORF7a58C58del2tGCt--11AY.390.000025
ORF7a58C58CtgCtgT11AY.39.10.00004
ORF7a58C58YtGctAc11AY.39.1.10.000725
ORF7a58C58LTGCCTT11AY.40.000002
ORF7a58C58QTGCCAG11AY.40.000002
ORF7a58C58del2TGc--c11AY.4.20.000022
ORF7a58C58CtgCtgT11AY.4.20.000022
ORF7a58C58CtgCtgT11AY.4.40.000409
ORF7a58C58FtGctTc11AY.410.000294
ORF7a58C58del2tGCt--11AY.420.00004
ORF7a58C58CtgCtgT11AY.420.00004
ORF7a58C58DTGcGAc11AY.430.000004
ORF7a58C58YtGctAc11AY.430.000004
ORF7a58C58XtgCtgA11AY.430.000004
ORF7a58C58DTGcGAc11AY.440.000006
ORF7a58C58LTGCCTT11AY.440.000006
ORF7a58C58HTGcCAc11AY.440.000006
ORF7a58C58FtGctTc11AY.440.000006
ORF7a58C58XtgCtgA11AY.450.000122
ORF7a58C58CtgCtgT11AY.460.000104
ORF7a58C58FtGctTc11AY.46.10.001027
ORF7a58C58FtGctTc11AY.46.20.000635
ORF7a58C58del2tGCt--11AY.46.60.000072
ORF7a58C58FtGctTc11AY.480.000465
ORF7a58C58del1tgCtg-11AY.50.000021
ORF7a58C58CtgCtgT11AY.50.000021
ORF7a58C58LtGCtTA11AY.540.000095
ORF7a58C58FtGctTc11AY.560.001605
ORF7a58C58XtgCtgA11AY.590.00053
ORF7a58C58CtgCtgT11AY.590.00053
ORF7a58C58del1Tgc-gc11AY.640.000595
ORF7a58C58FtGctTc11AY.690.000187
ORF7a58C58GTgcGgc11AY.7.20.000559
ORF7a58C58del2TGc--c11AY.7.20.000559
ORF7a58C58delTGC---11AY.720.001361
ORF7a58C58CtgCtgT11AY.750.000056
ORF7a58C58delTGC---11AY.810.001992
ORF7a58C58FtGctTc11AY.860.00083
ORF7a58C58delTGC---11AY.890.004902
ORF7a58C58FtGctTc11AY.900.000684
ORF7a58C58del1tgCtg-11AY.940.000443
ORF7a58C58delTGC---11AY.940.000443
ORF7a58C58FtGctTc11AY.950.000761
ORF7a58C58FtGctTc11AY.990.001049
ORF7a58C58FtGctTc11AY.99.20.000092
ORF7a58C58delTGC---11AZ.20.000821
ORF7a58C58FtGctTc11AZ.20.000821
ORF7a58C58delTGC---11B0.000128
ORF7a58C58FtGctTc11B0.000128
ORF7a58C58WtgCtgG11B.1.10.000018
ORF7a58C58FtGctTc11B.1.10.000018
ORF7a58C58STgcAgc11B.1.1.10.000327
ORF7a58C58FtGctTc11B.1.1.10.000327
ORF7a58C58delTGC---11B.1.1.1570.000913
ORF7a58C58delTGC---11B.1.1.1740.003378
ORF7a58C58StGCtCT11B.1.1.1890.001513
ORF7a58C58delTGC---11B.1.1.1920.002309
ORF7a58C58delTGC---11B.1.1.1940.00495
ORF7a58C58FtGctTc11B.1.1.2010.02439
ORF7a58C58delTGC---11B.1.1.2050.003717
ORF7a58C58delTGC---11B.1.1.2070.001182
ORF7a58C58delTGC---11B.1.1.2090.008929
ORF7a58C58delTGC---11B.1.1.2400.004695
ORF7a58C58delTGC---11B.1.1.2410.00207
ORF7a58C58delTGC---11B.1.1.2770.000759
ORF7a58C58FtGctTc11B.1.1.2770.000759
ORF7a58C58StGCtCT11B.1.1.2820.011628
ORF7a58C58delTGC---11B.1.1.2980.000862
ORF7a58C58delTGC---11B.1.1.3030.002762
ORF7a58C58StGCtCT11B.1.1.3050.003861
ORF7a58C58delTGC---11B.1.1.3110.000358
ORF7a58C58delTGC---11B.1.1.330.000421
ORF7a58C58delTGC---11B.1.1.3480.000796
ORF7a58C58CtgCtgT11B.1.1.3650.005587
ORF7a58C58delTGC---11B.1.1.3660.015873
ORF7a58C58GTgcGgc11B.1.1.3980.003226
ORF7a58C58WtgCtgG11B.1.1.4110.014706
ORF7a58C58delTGC---11B.1.1.4320.001266
ORF7a58C58delTGC---11B.1.1.4370.010417
ORF7a58C58STgcAgc11B.1.1.5190.00004
ORF7a58C58delTGC---11B.1.1.5250.005464
ORF7a58C58WtgCtgG11B.1.1.70.000001
ORF7a58C58del2TGc--c11B.1.1.700.000341
ORF7a58C58delTGC---11B.1.1.700.000341
ORF7a58C58delTGC---11B.1.1150.021739
ORF7a58C58del1tgCtg-11B.1.1280.000635
ORF7a58C58delTGC---11B.1.1400.018868
ORF7a58C58CtgCtgT11B.1.160.160.000929
ORF7a58C58del2tGCt--11B.1.160.260.002421
ORF7a58C58RTgCCgA11B.1.1770.000013
ORF7a58C58YtGctAc11B.1.1770.000013
ORF7a58C58STgcAgc11B.1.177.120.000152
ORF7a58C58delTGC---11B.1.177.150.000631
ORF7a58C58StGctCc11B.1.177.210.000076
ORF7a58C58NTGCAAT11B.1.177.210.000076
ORF7a58C58STgcAgc11B.1.177.330.001645
ORF7a58C58delTGC---11B.1.177.40.000211
ORF7a58C58del2TGc--c11B.1.177.50.001242
ORF7a58C58delTGC---11B.1.177.500.004695
ORF7a58C58CtgCtgT11B.1.177.510.004566
ORF7a58C58delTGC---11B.1.177.530.002392
ORF7a58C58delTGC---11B.1.177.620.001192
ORF7a58C58delTGC---11B.1.177.630.002703
ORF7a58C58delTGC---11B.1.177.70.000165
ORF7a58C58delTGC---11B.1.177.80.000752
ORF7a58C58GTgcGgc11B.1.177.800.001912
ORF7a58C58delTGC---11B.1.177.830.001481
ORF7a58C58STgcAgc11B.1.20.000009
ORF7a58C58YtGctAc11B.1.20.000009
ORF7a58C58CtgCtgT11B.1.20.000009
ORF7a58C58FtGctTc11B.1.214.20.0006
ORF7a58C58del2tGCt--11B.1.2210.000071
ORF7a58C58delTGC---11B.1.2360.002053
ORF7a58C58delTGC---11B.1.2400.000216
ORF7a58C58YtGctAc11B.1.2400.000216
ORF7a58C58CtgCtgT11B.1.2580.000067
ORF7a58C58delTGC---11B.1.258.170.000104
ORF7a58C58CtgCtgT11B.1.258.90.005
ORF7a58C58delTGC---11B.1.2650.001271
ORF7a58C58CtgCtgT11B.1.3510.00003
ORF7a58C58ATGCGCT11B.1.3510.00003
ORF7a58C58YtGCtAT11B.1.3510.00003
ORF7a58C58TTGcACc11B.1.3510.00003
ORF7a58C58FtGctTc11B.1.351.20.000303
ORF7a58C58delTGC---11B.1.351.30.000876
ORF7a58C58StGCtCT11B.1.360.000146
ORF7a58C58CtgCtgT11B.1.36.290.000517
ORF7a58C58delTGC---11B.1.36.350.002604
ORF7a58C58delTGC---11B.1.3710.001122
ORF7a58C58delTGC---11B.1.3890.001002
ORF7a58C58delTGC---11B.1.4010.008197
ORF7a58C58delTGC---11B.1.4060.006061
ORF7a58C58StGCtCG11B.1.4160.001269
ORF7a58C58YtGctAc11B.1.4270.00005
ORF7a58C58YtGctAc11B.1.4290.000024
ORF7a58C58StGCtCT11B.1.4380.006536
ORF7a58C58delTGC---11B.1.438.10.000107
ORF7a58C58FtGctTc11B.1.4530.003236
ORF7a58C58delTGC---11B.1.4590.004082
ORF7a58C58XtgCtgA11B.1.4590.004082
ORF7a58C58delTGC---11B.1.466.20.000391
ORF7a58C58CtgCtgT11B.1.466.20.000391
ORF7a58C58delTGC---11B.1.4680.005714
ORF7a58C58delTGC---11B.1.4970.000315
ORF7a58C58YtGctAc11B.1.5050.004386
ORF7a58C58delTGC---11B.1.5170.000427
ORF7a58C58StGCtCT11B.1.5250.000113
ORF7a58C58CtgCtgT11B.1.5250.000113
ORF7a58C58del2tGCt--11B.1.5250.000113
ORF7a58C58YtGctAc11B.1.5260.000024
ORF7a58C58delTGC---11B.1.5340.0125
ORF7a58C58delTGC---11B.1.5350.028571
ORF7a58C58FtGctTc11B.1.5510.00129
ORF7a58C58delTGC---11B.1.5640.000426
ORF7a58C58delTGC---11B.1.5650.00081
ORF7a58C58delTGC---11B.1.5680.001111
ORF7a58C58delTGC---11B.1.5760.000907
ORF7a58C58delTGC---11B.1.5770.000687
ORF7a58C58XtgCtgA11B.1.5880.00091
ORF7a58C58del1TGC-NN11B.1.5960.000087
ORF7a58C58delTGC---11B.1.6090.000479
ORF7a58C58delTGC---11B.1.617.10.000129
ORF7a58C58del2tGCt--11B.1.617.10.000129
ORF7a58C58RTgcCgc11B.1.617.20.000004
ORF7a58C58CtgCtgT11B.1.6210.000089
ORF7a58C58del2tGCt--11B.1.6230.000536
ORF7a58C58delTGC---11B.1.6270.00202
ORF7a58C58del1tgCtg-11B.1.6370.000073
ORF7a58C58delTGC---11B.1.6380.052632
ORF7a58C58delTGC---11B.1.9.10.032258
ORF7a58C58delTGC---11B.110.005128
ORF7a58C58delTGC---11B.390.002331
ORF7a58C58RTgcCgc11B.40.002208
ORF7a58C58XtgCtgA11B.60.00091
ORF7a58C58delTGC---11C.280.04
ORF7a58C58CtgCtgT11C.36.30.000567
ORF7a58C58StGctCc11D.20.000075
ORF7a58C58delTGC---11K.30.006173
ORF7a58C58CtgCtgT11P.10.000016
ORF7a58C58RTgcCgc11P.10.000016
ORF7a58C58del2tGCt--11P.10.000016
ORF7a58C58YtGctAc11P.10.000016
ORF7a58C58delTGC---11P.1.10.000318
ORF7a58C58CtgCtgT11P.1.100.000269
ORF7a58C58delTGC---11P.1.130.000898
ORF7a58C58STgcAgc11P.1.140.000048
ORF7a58C58RTgcCgc11P.1.160.000374
ORF7a58C58delTGC---11P.1.170.000162
ORF7a58C58delTGC---11P.1.30.034483
ORF7a58C58delTGC---11P.1.40.000977
ORF7a58C58FtGctTc11P.20.000187
ORF7a58C58CtgCtgT11P.20.000187
ORF7a58C58YtGctAc11Q.10.000126
ORF7a58C58STgcAgc11Q.10.000126
ORF7a58C58delTGC---11Q.70.001111
ORF7a58C58CtgCtgT11Q.80.000165
ORF7a58C58XtgCtgA11W.30.005263