CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 57

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a57T57deldelACT---2665026650127562-27564
ORF7a57T57del1delacTac-162316140.99445527562-27564
ORF7a57T57del1delACT-NN162340.0024645727562-27564
ORF7a57T57del1delaCTa-N162310.00061614327562-27564
ORF7a57T57del1delACT-AN162310.00061614327562-27564
ORF7a57T57del1delAcTTc-162310.00061614327562-27564
ORF7a57T57del1delaCTa-Y162310.00061614327562-27564
ORF7a57T57del1delACt-Tt162310.00061614327562-27564
ORF7a57T57InonsynaCtaTt2081920.92307727562-27564
ORF7a57T57InonsynaCTaTC208130.062527562-27564
ORF7a57T57InonsynaCTaTA20830.014423127562-27564
ORF7a57T57NnonsynaCtaAt1891820.96296327562-27564
ORF7a57T57NnonsynaCTaAC18970.03703727562-27564
ORF7a57T57TsynacTacG180930.51666727562-27564
ORF7a57T57TsynacTacC180630.3527562-27564
ORF7a57T57TsynacTacA180240.13333327562-27564
ORF7a57T57PnonsynActCct99910.91919227562-27564
ORF7a57T57PnonsynAcTCcC9940.04040427562-27564
ORF7a57T57PnonsynAcTCcA9930.03030327562-27564
ORF7a57T57PnonsynAcTCcG9910.01010127562-27564
ORF7a57T57del2delaCTa--93510.54838727562-27564
ORF7a57T57del2delACt--t93330.35483927562-27564
ORF7a57T57del2delACT--N9340.043010827562-27564
ORF7a57T57del2delACTG--9320.021505427562-27564
ORF7a57T57del2delACT--W9310.010752727562-27564
ORF7a57T57del2delACT--C9310.010752727562-27564
ORF7a57T57del2delACT--K9310.010752727562-27564
ORF7a57T57AnonsynActGct9090127562-27564
ORF7a57T57SnonsynActTct35190.54285727562-27564
ORF7a57T57SnonsynaCtaGt35120.34285727562-27564
ORF7a57T57SnonsynAcTTcA3510.028571427562-27564
ORF7a57T57SnonsynAcTTcC3510.028571427562-27564
ORF7a57T57SnonsynAcTTcG3510.028571427562-27564
ORF7a57T57SnonsynaCTaGC3510.028571427562-27564
ORF7a57T57LnonsynACtCTt1460.42857127562-27564
ORF7a57T57LnonsynACTTTG1430.21428627562-27564
ORF7a57T57LnonsynACTCTA1420.14285727562-27564
ORF7a57T57LnonsynACTTTA1410.071428627562-27564
ORF7a57T57LnonsynACTCTC1410.071428627562-27564
ORF7a57T57LnonsynACTCTG1410.071428627562-27564
ORF7a57T57VnonsynACTGTA1260.527562-27564
ORF7a57T57VnonsynACtGTt1240.33333327562-27564
ORF7a57T57VnonsynACTGTG1220.16666727562-27564
ORF7a57T57KnonsynaCTaAA1180.72727327562-27564
ORF7a57T57KnonsynaCTaAG1130.27272727562-27564
ORF7a57T57FnonsynACtTTt860.7527562-27564
ORF7a57T57FnonsynACTTTC820.2527562-27564
ORF7a57T57RnonsynaCTaGA530.627562-27564
ORF7a57T57YnonsynACtTAt530.627562-27564
ORF7a57T57RnonsynaCTaGG520.427562-27564
ORF7a57T57YnonsynACTTAC520.427562-27564
ORF7a57T57MnonsynaCTaTG33127562-27564
ORF7a57T57CnonsynACTTGC210.527562-27564
ORF7a57T57CnonsynACtTGt210.527562-27564
ORF7a57T57HnonsynACtCAt11127562-27564
ORF7a57T57QnonsynACTCAA11127562-27564
ORF7a57T57DnonsynACtGAt11127562-27564
ORF7a57T57XnonsynACTTAG11127562-27564
ORF7a57T57EnonsynACTGAA11127562-27564

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a57T57delACT---2665026650All0.005097
ORF7a57T57delACT---1159411594AY.40.018045
ORF7a57T57delACT---27142714B.1.617.20.010219
ORF7a57T57delACT---17751775B.1.1.70.001589
ORF7a57T57delACT---16651665AY.120.10.53451
ORF7a57T57del1acTac-16141623All0.000309
ORF7a57T57del1ACT-NN41623All0.000001
ORF7a57T57del1aCTa-N11623All0
ORF7a57T57del1ACt-Tt11623All0
ORF7a57T57del1aCTa-Y11623All0
ORF7a57T57del1ACT-AN11623All0
ORF7a57T57del1AcTTc-11623All0
ORF7a57T57delACT---14791479AY.250.008896
ORF7a57T57delACT---841841AY.430.003726
ORF7a57T57delACT---532532AY.1030.003303
ORF7a57T57del1acTac-480481B.1.617.20.001807
ORF7a57T57del1ACT-AN1481B.1.617.20.000004
ORF7a57T57delACT---425425AY.260.012032
ORF7a57T57delACT---422422AY.30.004197
ORF7a57T57delACT---379379AY.390.009366
ORF7a57T57delACT---370370AY.440.002252
ORF7a57T57delACT---311311AY.1020.008246
ORF7a57T57delACT---255255AY.290.004022
ORF7a57T57del1acTac-231233AY.40.00036
ORF7a57T57del1ACT-NN2233AY.40.000003
ORF7a57T57IaCtaTt192208All0.000037
ORF7a57T57IaCTaTC13208All0.000002
ORF7a57T57IaCTaTA3208All0.000001
ORF7a57T57del1acTac-205206B.1.1.70.000184
ORF7a57T57del1ACT-NN1206B.1.1.70.000001
ORF7a57T57delACT---196196B.1.3510.005826
ORF7a57T57delACT---191191AY.1200.007101
ORF7a57T57NaCtaAt182189All0.000035
ORF7a57T57NaCTaAC7189All0.000001
ORF7a57T57delACT---181181B.1.177.210.013841
ORF7a57T57TacTacG93180All0.000018
ORF7a57T57TacTacC63180All0.000012
ORF7a57T57TacTacA24180All0.000005
ORF7a57T57delACT---167167AY.4.20.003622
ORF7a57T57del1acTac-133133AY.980.010506
ORF7a57T57delACT---112112AY.470.003484
ORF7a57T57delACT---111111AY.1000.005107
ORF7a57T57delACT---111111AY.1190.003919
ORF7a57T57delACT---110110AY.7.10.012397
ORF7a57T57PActCct9199All0.000017
ORF7a57T57PAcTCcC499All0.000001
ORF7a57T57PAcTCcA399All0.000001
ORF7a57T57PAcTCcG199All0
ORF7a57T57del2aCTa--5193All0.00001
ORF7a57T57del2ACt--t3393All0.000006
ORF7a57T57del2ACT--N493All0.000001
ORF7a57T57del2ACTG--293All0
ORF7a57T57del2ACT--C193All0
ORF7a57T57del2ACT--K193All0
ORF7a57T57del2ACT--W193All0
ORF7a57T57AActGct9090All0.000017
ORF7a57T57delACT---8787B.1.1770.001146
ORF7a57T57NaCtaAt8284B.1.1.70.000073
ORF7a57T57NaCTaAC284B.1.1.70.000002
ORF7a57T57delACT---8282AY.46.40.013489
ORF7a57T57del1acTac-7676AY.1030.000472
ORF7a57T57delACT---7171AY.46.60.005127
ORF7a57T57del1acTac-7070B.1.5260.001645
ORF7a57T57del1acTac-6768AY.440.000408
ORF7a57T57del1ACT-NN168AY.440.000006
ORF7a57T57delACT---6767AY.50.001383
ORF7a57T57delACT---6565B.1.20.000572
ORF7a57T57PActCct5959AY.40.000092
ORF7a57T57del1acTac-5959B.10.00054
ORF7a57T57delACT---5858AY.3.10.004945
ORF7a57T57delACT---5757AY.330.003806
ORF7a57T57delACT---5757B.10.000522
ORF7a57T57delACT---5555AY.39.10.002179
ORF7a57T57delACT---5555AY.450.006693
ORF7a57T57delACT---5555AY.750.003081
ORF7a57T57delACT---5454AY.420.002172
ORF7a57T57delACT---5454AY.60.002221
ORF7a57T57delACT---5252AY.1130.007404
ORF7a57T57delACT---5252AY.230.003627
ORF7a57T57delACT---4848AY.200.001866
ORF7a57T57delACT---4848AY.460.004996
ORF7a57T57delACT---4747B.1.5260.001105
ORF7a57T57delACT---4545AY.1070.020969
ORF7a57T57delACT---4545B.1.1.2840.004833
ORF7a57T57delACT---4545B.1.6210.003983
ORF7a57T57delACT---4444AY.130.007083
ORF7a57T57delACT---4343P.10.000677
ORF7a57T57delACT---4242AY.540.004005
ORF7a57T57delACT---3939AY.980.003081
ORF7a57T57delACT---3636AY.1100.004057
ORF7a57T57delACT---3636AY.98.10.001744
ORF7a57T57SActTct1935All0.000004
ORF7a57T57SaCtaGt1235All0.000002
ORF7a57T57SAcTTcC135All0
ORF7a57T57SaCTaGC135All0
ORF7a57T57SAcTTcG135All0
ORF7a57T57SAcTTcA135All0
ORF7a57T57delACT---3535AY.1180.002193
ORF7a57T57IaCtaTt3434AY.7.20.019016
ORF7a57T57delACT---3131AY.340.003006
ORF7a57T57delACT---3030AY.70.00588
ORF7a57T57delACT---3030AY.90.002028
ORF7a57T57TacTacG2929AY.430.000128
ORF7a57T57delACT---2828AY.1170.002366
ORF7a57T57IaCtaTt2728AY.40.000042
ORF7a57T57IaCTaTC128AY.40.000002
ORF7a57T57delACT---2828AY.600.026266
ORF7a57T57delACT---2828B.1.10.000508
ORF7a57T57AActGct2727AY.250.000162
ORF7a57T57TacTacC1427B.1.1.70.000013
ORF7a57T57TacTacA727B.1.1.70.000006
ORF7a57T57TacTacG627B.1.1.70.000005
ORF7a57T57delACT---2525AY.190.028506
ORF7a57T57delACT---2525AY.7.20.013982
ORF7a57T57delACT---2525B.1.1.2140.001386
ORF7a57T57delACT---2424AY.9.10.002009
ORF7a57T57del1acTac-2424AY.910.017531
ORF7a57T57IaCtaTt2324B.1.1.70.000021
ORF7a57T57IaCTaTC124B.1.1.70.000001
ORF7a57T57delACT---2323AY.300.009102
ORF7a57T57del1acTac-2323AY.330.001536
ORF7a57T57delACT---2020AY.1210.002706
ORF7a57T57NaCtaAt2020B.1.2430.001392
ORF7a57T57TacTacG1119AY.40.000017
ORF7a57T57TacTacC819AY.40.000012
ORF7a57T57delACT---1818AY.1060.006028
ORF7a57T57NaCtaAt1818AY.430.00008
ORF7a57T57delACT---1818AY.610.001886
ORF7a57T57delACT---1818AY.9.20.000661
ORF7a57T57delACT---1818AY.99.20.001659
ORF7a57T57delACT---1818B.1.6370.001315
ORF7a57T57delACT---1717AY.4.50.001827
ORF7a57T57delACT---1717AY.740.001966
ORF7a57T57NaCtaAt1717B.1.617.20.000064
ORF7a57T57del2aCTa--917B.1.617.20.000034
ORF7a57T57del2ACt--t417B.1.617.20.000015
ORF7a57T57del2ACTG--217B.1.617.20.000008
ORF7a57T57del2ACT--W117B.1.617.20.000004
ORF7a57T57del2ACT--K117B.1.617.20.000004
ORF7a57T57delACT---1616AY.10.006332
ORF7a57T57delACT---1616R.10.00144
ORF7a57T57IaCtaTt1515AY.16.10.007049
ORF7a57T57delACT---1515AY.360.002223
ORF7a57T57delACT---1515B.1.1.2220.00306
ORF7a57T57delACT---1515B.1.4290.000353
ORF7a57T57delACT---1515B.1.5960.001307
ORF7a57T57delACT---1515C.370.001741
ORF7a57T57LACtCTt614All0.000001
ORF7a57T57LACTTTG314All0.000001
ORF7a57T57LACTCTA214All0
ORF7a57T57LACTCTC114All0
ORF7a57T57LACTTTA114All0
ORF7a57T57LACTCTG114All0
ORF7a57T57delACT---1414AY.1110.002564
ORF7a57T57delACT---1414AY.1140.003235
ORF7a57T57delACT---1414AY.1160.004015
ORF7a57T57del1acTac-1414AY.4.20.000304
ORF7a57T57delACT---1414AY.46.20.008895
ORF7a57T57delACT---1414B.1.1.2580.045603
ORF7a57T57delACT---1414B.1.1600.000437
ORF7a57T57del1acTac-1313AY.250.000078
ORF7a57T57delACT---1313AY.680.003559
ORF7a57T57TacTacC1313B.1.1.2980.011207
ORF7a57T57del1acTac-1313B.1.20.000114
ORF7a57T57VACTGTA612All0.000001
ORF7a57T57VACtGTt412All0.000001
ORF7a57T57VACTGTG212All0
ORF7a57T57delACT---1212AY.140.001056
ORF7a57T57delACT---1212AY.370.003793
ORF7a57T57delACT---1212B.1.2430.000835
ORF7a57T57delACT---1212B.1.3240.019262
ORF7a57T57KaCTaAA811All0.000002
ORF7a57T57KaCTaAG311All0.000001
ORF7a57T57NaCtaAt911AY.250.000054
ORF7a57T57NaCTaAC211AY.250.000012
ORF7a57T57del1acTac-1111AY.30.000109
ORF7a57T57delACT---1111AY.870.009159
ORF7a57T57delACT---1111AY.990.011542
ORF7a57T57IaCTaTC711B.1.3510.000208
ORF7a57T57IaCtaTt311B.1.3510.000089
ORF7a57T57IaCTaTA111B.1.3510.00003
ORF7a57T57delACT---1010AY.120.003161
ORF7a57T57delACT---1010AY.350.00233
ORF7a57T57delACT---1010AY.4.2.10.00149
ORF7a57T57del1acTac-1010AY.430.000044
ORF7a57T57delACT---1010AY.840.004374
ORF7a57T57TacTacG1010B.1.1.3050.03861
ORF7a57T57delACT---1010B.1.4270.000505
ORF7a57T57delACT---99AY.1090.006657
ORF7a57T57del2aCTa--79AY.40.000011
ORF7a57T57del2ACT--N29AY.40.000003
ORF7a57T57SActTct89B.1.1.70.000007
ORF7a57T57SaCtaGt19B.1.1.70.000001
ORF7a57T57delACT---99B.1.258.90.045
ORF7a57T57delACT---99B.1.5250.001018
ORF7a57T57AActGct99B.1.617.20.000034
ORF7a57T57IaCtaTt79B.1.617.20.000026
ORF7a57T57IaCTaTA29B.1.617.20.000008
ORF7a57T57delACT---99L.10.017143
ORF7a57T57FACtTTt68All0.000001
ORF7a57T57FACTTTC28All0
ORF7a57T57PActCct88AY.1030.00005
ORF7a57T57del1acTac-88AY.1190.000282
ORF7a57T57del1acTac-88AY.1200.000297
ORF7a57T57delACT---88AY.270.000518
ORF7a57T57delACT---88AY.29.10.001764
ORF7a57T57AActGct88AY.430.000035
ORF7a57T57del1acTac-88AY.540.000763
ORF7a57T57delACT---88AY.620.003486
ORF7a57T57delACT---88B.1.1.2310.024768
ORF7a57T57AActGct88B.1.1.70.000007
ORF7a57T57del2ACt--t58B.1.1.70.000004
ORF7a57T57del2aCTa--38B.1.1.70.000003
ORF7a57T57del2aCTa--88B.1.1770.000105
ORF7a57T57IaCtaTt88B.1.1770.000105
ORF7a57T57VACTGTA68B.1.617.20.000023
ORF7a57T57VACtGTt28B.1.617.20.000008
ORF7a57T57delACT---88P.1.150.001859
ORF7a57T57delACT---88Q.80.001319
ORF7a57T57SaCtaGt37AY.250.000018
ORF7a57T57SaCTaGC17AY.250.000006
ORF7a57T57SAcTTcA17AY.250.000006
ORF7a57T57SAcTTcC17AY.250.000006
ORF7a57T57SAcTTcG17AY.250.000006
ORF7a57T57IaCtaTt57AY.260.000142
ORF7a57T57del2ACt--t47AY.260.000113
ORF7a57T57del2aCTa--27AY.260.000057
ORF7a57T57IaCTaTC27AY.260.000057
ORF7a57T57del2ACT--N17AY.260.000028
ORF7a57T57AActGct77AY.40.000011
ORF7a57T57del1acTac-77AY.70.001372
ORF7a57T57delACT---77AY.710.003325
ORF7a57T57IaCtaTt77AY.750.000392
ORF7a57T57delACT---77AY.850.00299
ORF7a57T57delACT---77B.1.1.5190.000278
ORF7a57T57del1acTac-77B.1.4270.000353
ORF7a57T57delACT---66AY.100.00318
ORF7a57T57IaCtaTt56AY.250.00003
ORF7a57T57FACtTTt46AY.250.000024
ORF7a57T57FACTTTC26AY.250.000012
ORF7a57T57LACTTTG26AY.250.000012
ORF7a57T57LACTCTA16AY.250.000006
ORF7a57T57LACTCTC16AY.250.000006
ORF7a57T57LACTTTA16AY.250.000006
ORF7a57T57IaCTaTC16AY.250.000006
ORF7a57T57LACTCTG16AY.250.000006
ORF7a57T57del1acTac-66AY.360.000889
ORF7a57T57del2ACt--t66AY.420.000241
ORF7a57T57delACT---66AY.46.10.00616
ORF7a57T57del1acTac-66AY.46.40.000987
ORF7a57T57delACT---66AY.46.50.00119
ORF7a57T57delACT---66AY.650.003198
ORF7a57T57delACT---66AY.900.004107
ORF7a57T57delACT---66AY.910.004383
ORF7a57T57delACT---66AY.920.001724
ORF7a57T57del1acTac-56B.1.3510.000149
ORF7a57T57del1aCTa-Y16B.1.3510.00003
ORF7a57T57delACT---66B.1.3750.004918
ORF7a57T57del1acTac-66P.10.000095
ORF7a57T57IaCtaTt66P.10.000095
ORF7a57T57delACT---66Q.10.000758
ORF7a57T57NaCtaAt55A.23.10.003521
ORF7a57T57RaCTaGA35All0.000001
ORF7a57T57YACtTAt35All0.000001
ORF7a57T57YACTTAC25All0
ORF7a57T57RaCTaGG25All0
ORF7a57T57del1acTac-55AY.1000.00023
ORF7a57T57SActTct55AY.120.00158
ORF7a57T57delACT---55AY.160.001898
ORF7a57T57YACtTAt35AY.250.000018
ORF7a57T57YACTTAC25AY.250.000012
ORF7a57T57PActCct25AY.250.000012
ORF7a57T57PAcTCcG15AY.250.000006
ORF7a57T57PAcTCcA15AY.250.000006
ORF7a57T57PAcTCcC15AY.250.000006
ORF7a57T57del1acTac-55AY.260.000142
ORF7a57T57del2aCTa--35AY.30.00003
ORF7a57T57del2ACt--t25AY.30.00002
ORF7a57T57delACT---55AY.4.40.002046
ORF7a57T57del1acTac-55AY.470.000156
ORF7a57T57delACT---55AY.480.002326
ORF7a57T57delACT---55AY.5.40.001384
ORF7a57T57delACT---55AY.520.004072
ORF7a57T57delACT---55AY.660.005348
ORF7a57T57del2aCTa--35AY.70.000588
ORF7a57T57del2ACt--t25AY.70.000392
ORF7a57T57del1acTac-55AY.7.10.000564
ORF7a57T57delACT---55AY.800.005643
ORF7a57T57delACT---55AY.950.003805
ORF7a57T57TacTacG55B.1.1.2140.000277
ORF7a57T57del1acTac-45B.1.1.2140.000222
ORF7a57T57del1AcTTc-15B.1.1.2140.000055
ORF7a57T57delACT---55B.1.1.560.089286
ORF7a57T57SaCtaGt45B.1.617.20.000015
ORF7a57T57SActTct15B.1.617.20.000004
ORF7a57T57delACT---55B.1.700.121951
ORF7a57T57AActGct55C.370.00058
ORF7a57T57TacTacG55P.10.000079
ORF7a57T57delACT---55P.1.140.000239
ORF7a57T57delACT---55P.20.000933
ORF7a57T57IaCtaTt55R.10.00045
ORF7a57T57PActCct240.111111
ORF7a57T57PAcTCcC240.111111
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ORF7a57T57NaCtaAt44AY.1020.000106
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ORF7a57T57del1aCTa-N14AY.1020.000027
ORF7a57T57del1acTac-44AY.1080.00441
ORF7a57T57TacTacA44AY.130.000644
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ORF7a57T57TacTacG24AY.250.000012
ORF7a57T57KaCTaAA24AY.250.000012
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ORF7a57T57del1acTac-44AY.290.000063
ORF7a57T57AActGct44AY.30.00004
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ORF7a57T57del1acTac-44AY.450.000487
ORF7a57T57del1acTac-44AY.5.40.001107
ORF7a57T57delACT---44AY.590.002119
ORF7a57T57delACT---44AY.730.002661
ORF7a57T57del1acTac-44AY.900.002738
ORF7a57T57delACT---44B.1.214.20.002398
ORF7a57T57delACT---44B.1.2340.000528
ORF7a57T57TacTacG44B.1.2580.000266
ORF7a57T57TacTacA34B.1.3510.000089
ORF7a57T57TacTacC14B.1.3510.00003
ORF7a57T57TacTacC44B.1.360.000584
ORF7a57T57TacTacC24B.1.617.20.000008
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ORF7a57T57TacTacG14B.1.617.20.000004
ORF7a57T57del1acTac-44B.1.6210.000354
ORF7a57T57delACT---44D.20.0003
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ORF7a57T57PActCct33AY.1190.000106
ORF7a57T57del1acTac-33AY.200.000117
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ORF7a57T57NaCtaAt33AY.30.00003
ORF7a57T57IaCtaTt33AY.340.000291
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ORF7a57T57delACT---33AY.4.30.002525
ORF7a57T57delACT---33AY.400.002893
ORF7a57T57delACT---33AY.410.000882
ORF7a57T57NaCtaAt33AY.440.000018
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ORF7a57T57delACT---33AY.530.000863
ORF7a57T57del1acTac-33AY.610.000314
ORF7a57T57delACT---33AY.690.00056
ORF7a57T57delACT---33AY.75.10.000541
ORF7a57T57delACT---33AY.860.00249
ORF7a57T57delACT---33AY.880.002653
ORF7a57T57delACT---33AY.930.000819
ORF7a57T57TacTacG33B.10.000027
ORF7a57T57IaCtaTt33B.10.000027
ORF7a57T57TacTacG33B.1.10.000054
ORF7a57T57delACT---33B.1.1.1210.007282
ORF7a57T57delACT---33B.1.1.3180.000905
ORF7a57T57PActCct23B.1.1.70.000002
ORF7a57T57PAcTCcC13B.1.1.70.000001
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ORF7a57T57NaCtaAt33B.1.1770.00004
ORF7a57T57KaCTaAA33B.1.177.210.000229
ORF7a57T57delACT---33B.1.177.60.00293
ORF7a57T57delACT---33B.1.177.600.000655
ORF7a57T57TacTacA13B.1.20.000009
ORF7a57T57TacTacG13B.1.20.000009
ORF7a57T57TacTacC13B.1.20.000009
ORF7a57T57del1acTac-33B.1.214.20.001799
ORF7a57T57AActGct33B.1.3510.000089
ORF7a57T57PAcTCcA23B.1.3510.000059
ORF7a57T57PActCct13B.1.3510.00003
ORF7a57T57delACT---33B.1.351.20.000908
ORF7a57T57delACT---33B.1.360.000438
ORF7a57T57delACT---33B.1.5750.00091
ORF7a57T57delACT---33B.1.5820.001472
ORF7a57T57delACT---33B.1.6260.017143
ORF7a57T57delACT---33P.1.160.001122
ORF7a57T57TacTacC220.111111
ORF7a57T57delACT---220.111111
ORF7a57T57delACT---22A.280.005291
ORF7a57T57CACtTGt12All0
ORF7a57T57CACTTGC12All0
ORF7a57T57del1acTac-22AY.100.00106
ORF7a57T57delACT---22AY.1010.000981
ORF7a57T57del2aCTa--22AY.1020.000053
ORF7a57T57IaCtaTt22AY.1030.000012
ORF7a57T57delACT---22AY.1080.002205
ORF7a57T57delACT---22AY.116.10.000623
ORF7a57T57TacTacC22AY.1190.000071
ORF7a57T57delACT---22AY.120.20.002571
ORF7a57T57delACT---22AY.120.2.10.000997
ORF7a57T57delACT---22AY.20.000712
ORF7a57T57delACT---22AY.220.004184
ORF7a57T57CACTTGC12AY.250.000006
ORF7a57T57CACtTGt12AY.250.000006
ORF7a57T57NaCtaAt22AY.270.000129
ORF7a57T57TacTacG22AY.30.00002
ORF7a57T57IaCtaTt22AY.30.00002
ORF7a57T57IaCtaTt22AY.390.000049
ORF7a57T57del2aCTa--22AY.4.20.000043
ORF7a57T57TacTacA12AY.4.50.000107
ORF7a57T57TacTacC12AY.4.50.000107
ORF7a57T57IaCtaTt22AY.430.000009
ORF7a57T57del2aCTa--12AY.430.000004
ORF7a57T57del2ACt--t12AY.430.000004
ORF7a57T57TacTacG22AY.440.000012
ORF7a57T57IaCtaTt22AY.440.000012
ORF7a57T57TacTacG22AY.460.000208
ORF7a57T57del1acTac-22AY.460.000208
ORF7a57T57del2aCTa--22AY.460.000208
ORF7a57T57delACT---22AY.490.00639
ORF7a57T57del2ACt--t22AY.50.000041
ORF7a57T57delACT---22AY.510.001818
ORF7a57T57delACT---22AY.570.001312
ORF7a57T57delACT---22AY.640.00119
ORF7a57T57delACT---22AY.700.000417
ORF7a57T57del1acTac-22AY.750.000112
ORF7a57T57PActCct22AY.750.000112
ORF7a57T57delACT---22AY.790.002421
ORF7a57T57delACT---22AY.80.001212
ORF7a57T57del1acTac-22AY.90.000135
ORF7a57T57del1acTac-22AY.99.20.000184
ORF7a57T57SaCtaGt12B.10.000009
ORF7a57T57SActTct12B.10.000009
ORF7a57T57del1acTac-22B.1.10.000036
ORF7a57T57delACT---22B.1.1.10.000653
ORF7a57T57delACT---22B.1.1.2200.003717
ORF7a57T57delACT---22B.1.1.250.001137
ORF7a57T57del1acTac-22B.1.1.2840.000215
ORF7a57T57AActGct22B.1.1.3110.000716
ORF7a57T57delACT---22B.1.1.370.000386
ORF7a57T57delACT---22B.1.1.3720.001377
ORF7a57T57del1acTac-22B.1.1.5190.000079
ORF7a57T57delACT---22B.1.1.5210.010695
ORF7a57T57VACtGTt22B.1.1.70.000002
ORF7a57T57AActGct22B.1.1770.000026
ORF7a57T57delACT---22B.1.177.160.001329
ORF7a57T57IaCtaTt22B.1.177.210.000153
ORF7a57T57TacTacC22B.1.177.210.000153
ORF7a57T57del1acTac-12B.1.177.210.000076
ORF7a57T57NaCtaAt12B.1.177.210.000076
ORF7a57T57NaCTaAC12B.1.177.210.000076
ORF7a57T57del1ACt-Tt12B.1.177.210.000076
ORF7a57T57delACT---22B.1.177.430.002954
ORF7a57T57delACT---22B.1.177.550.004662
ORF7a57T57delACT---22B.1.177.810.000379
ORF7a57T57delACT---22B.1.177.860.000367
ORF7a57T57PActCct22B.1.2210.000142
ORF7a57T57delACT---22B.1.2210.000142
ORF7a57T57NaCTaAC22B.1.221.40.008333
ORF7a57T57TacTacG22B.1.2430.000139
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ORF7a57T57delACT---22B.1.2580.000133
ORF7a57T57delACT---22B.1.258.110.000793
ORF7a57T57PActCct22B.1.258.170.000208
ORF7a57T57delACT---22B.1.2640.024691
ORF7a57T57delACT---22B.1.3110.000549
ORF7a57T57KaCTaAA22B.1.3510.000059
ORF7a57T57LACTCTA12B.1.3510.00003
ORF7a57T57LACtCTt12B.1.3510.00003
ORF7a57T57del1acTac-22B.1.3690.00057
ORF7a57T57delACT---22B.1.416.10.003125
ORF7a57T57IaCtaTt22B.1.4270.000101
ORF7a57T57del1acTac-22B.1.4290.000047
ORF7a57T57delACT---22B.1.4700.002809
ORF7a57T57delACT---22B.1.5950.000522
ORF7a57T57LACtCTt22B.1.617.20.000008
ORF7a57T57RaCTaGA12B.1.617.20.000004
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ORF7a57T57KaCTaAA12B.1.617.20.000004
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ORF7a57T57delACT---22B.1.617.30.00597
ORF7a57T57AActGct22B.1.617.30.00597
ORF7a57T57delACT---22B.1.621.10.001012
ORF7a57T57delACT---22C.36.30.001134
ORF7a57T57TacTacG12C.370.000116
ORF7a57T57TacTacC12C.370.000116
ORF7a57T57del1acTac-22P.1.140.000096
ORF7a57T57delACT---22P.1.17.10.00175
ORF7a57T57delACT---22P.1.20.002312
ORF7a57T57del1acTac-22Q.80.00033
ORF7a57T57delACT---11A.10.000282
ORF7a57T57AActGct11A.2.40.003367
ORF7a57T57delACT---11A.2.5.30.010309
ORF7a57T57delACT---11A.23.10.000704
ORF7a57T57delACT---11AD.20.000219
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ORF7a57T57XACTTAG11All0
ORF7a57T57DACtGAt11All0
ORF7a57T57EACTGAA11All0
ORF7a57T57delACT---11AU.30.00211
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ORF7a57T57IaCtaTt11AY.10.000396
ORF7a57T57MaCTaTG11AY.10.000396
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ORF7a57T57AActGct11AY.1000.000046
ORF7a57T57IaCtaTt11AY.1000.000046
ORF7a57T57del1acTac-11AY.1010.00049
ORF7a57T57SActTct11AY.1030.000006
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ORF7a57T57TacTacC11AY.1030.000006
ORF7a57T57delACT---11AY.1040.001984
ORF7a57T57delACT---11AY.1050.000643
ORF7a57T57PActCct11AY.1050.000643
ORF7a57T57del1acTac-11AY.1060.000335
ORF7a57T57TacTacC11AY.1060.000335
ORF7a57T57PActCct11AY.1060.000335
ORF7a57T57delACT---11AY.110.001339
ORF7a57T57IaCtaTt11AY.1100.000113
ORF7a57T57del2ACT--C11AY.1110.000183
ORF7a57T57TacTacC11AY.1110.000183
ORF7a57T57IaCtaTt11AY.1170.000085
ORF7a57T57LACtCTt11AY.1190.000035
ORF7a57T57IaCtaTt11AY.1200.000037
ORF7a57T57IaCtaTt11AY.120.10.000321
ORF7a57T57del1acTac-11AY.120.10.000321
ORF7a57T57IaCtaTt11AY.120.20.001285
ORF7a57T57del1acTac-11AY.140.000088
ORF7a57T57del2aCTa--11AY.140.000088
ORF7a57T57PActCct11AY.160.00038
ORF7a57T57AActGct11AY.200.000039
ORF7a57T57NaCtaAt11AY.230.00007
ORF7a57T57IaCTaTC11AY.230.00007
ORF7a57T57del2aCTa--11AY.230.00007
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ORF7a57T57XACTTAG11AY.250.000006
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ORF7a57T57TacTacA11AY.260.000028
ORF7a57T57IaCtaTt11AY.290.000016
ORF7a57T57PActCct11AY.290.000016
ORF7a57T57LACtCTt11AY.3.10.000085
ORF7a57T57del1acTac-11AY.3.10.000085
ORF7a57T57IaCtaTt11AY.300.000396
ORF7a57T57delACT---11AY.320.000532
ORF7a57T57del2aCTa--11AY.34.10.00051
ORF7a57T57IaCtaTt11AY.360.000148
ORF7a57T57del1acTac-11AY.370.000316
ORF7a57T57delACT---11AY.380.000499
ORF7a57T57del1acTac-11AY.390.000025
ORF7a57T57del1acTac-11AY.39.20.001541
ORF7a57T57delACT---11AY.39.20.001541
ORF7a57T57VACTGTG11AY.40.000002
ORF7a57T57DACtGAt11AY.40.000002
ORF7a57T57del1acTac-11AY.4.2.10.000149
ORF7a57T57del1acTac-11AY.420.00004
ORF7a57T57PActCct11AY.430.000004
ORF7a57T57del2ACt--t11AY.440.000006
ORF7a57T57VACTGTG11AY.440.000006
ORF7a57T57PActCct11AY.440.000006
ORF7a57T57del2aCTa--11AY.46.40.000165
ORF7a57T57del1acTac-11AY.46.50.000198
ORF7a57T57AActGct11AY.46.60.000072
ORF7a57T57del1acTac-11AY.46.60.000072
ORF7a57T57del1acTac-11AY.50.000021
ORF7a57T57TacTacA11AY.570.000656
ORF7a57T57IaCtaTt11AY.60.000041
ORF7a57T57del1acTac-11AY.620.000436
ORF7a57T57del1acTac-11AY.640.000595
ORF7a57T57del2ACt--t11AY.7.10.000113
ORF7a57T57delACT---11AY.720.001361
ORF7a57T57del1acTac-11AY.790.001211
ORF7a57T57delACT---11AY.810.001992
ORF7a57T57del2aCTa--11AY.840.000437
ORF7a57T57del1acTac-11AY.840.000437
ORF7a57T57delACT---11AY.890.004902
ORF7a57T57del1acTac-11AY.9.20.000037
ORF7a57T57PActCct11AY.900.000684
ORF7a57T57delACT---11AY.940.000443
ORF7a57T57IaCtaTt11AY.98.10.000048
ORF7a57T57del1acTac-11AY.98.10.000048
ORF7a57T57delACT---11AZ.20.000821
ORF7a57T57delACT---11B0.000128
ORF7a57T57del2ACt--t11B.10.000009
ORF7a57T57AActGct11B.10.000009
ORF7a57T57NaCtaAt11B.10.000009
ORF7a57T57IaCtaTt11B.1.10.000018
ORF7a57T57SActTct11B.1.10.000018
ORF7a57T57delACT---11B.1.1.1570.000913
ORF7a57T57delACT---11B.1.1.1740.003378
ORF7a57T57delACT---11B.1.1.1920.002309
ORF7a57T57delACT---11B.1.1.1940.00495
ORF7a57T57delACT---11B.1.1.2050.003717
ORF7a57T57delACT---11B.1.1.2070.001182
ORF7a57T57delACT---11B.1.1.2090.008929
ORF7a57T57NaCtaAt11B.1.1.2100.005714
ORF7a57T57delACT---11B.1.1.2400.004695
ORF7a57T57delACT---11B.1.1.2410.00207
ORF7a57T57del2aCTa--11B.1.1.250.000569
ORF7a57T57delACT---11B.1.1.2770.000759
ORF7a57T57delACT---11B.1.1.2980.000862
ORF7a57T57delACT---11B.1.1.3030.002762
ORF7a57T57del1acTac-11B.1.1.3110.000358
ORF7a57T57delACT---11B.1.1.330.000421
ORF7a57T57NaCtaAt11B.1.1.330.000421
ORF7a57T57delACT---11B.1.1.3480.000796
ORF7a57T57IaCtaTt11B.1.1.3480.000796
ORF7a57T57delACT---11B.1.1.3660.015873
ORF7a57T57delACT---11B.1.1.4320.001266
ORF7a57T57delACT---11B.1.1.4370.010417
ORF7a57T57IaCtaTt11B.1.1.500.000679
ORF7a57T57IaCtaTt11B.1.1.5190.00004
ORF7a57T57delACT---11B.1.1.5250.005464
ORF7a57T57IaCtaTt11B.1.1.580.005376
ORF7a57T57LACtCTt11B.1.1.70.000001
ORF7a57T57delACT---11B.1.1.700.000341
ORF7a57T57TacTacC11B.1.1.700.000341
ORF7a57T57delACT---11B.1.1150.021739
ORF7a57T57delACT---11B.1.1400.018868
ORF7a57T57NaCtaAt11B.1.1600.000031
ORF7a57T57AActGct11B.1.1600.000031
ORF7a57T57del1acTac-11B.1.1600.000031
ORF7a57T57TacTacC11B.1.160.220.006757
ORF7a57T57TacTacG11B.1.160.320.004292
ORF7a57T57delACT---11B.1.177.100.000878
ORF7a57T57TacTacA11B.1.177.150.000631
ORF7a57T57PActCct11B.1.177.210.000076
ORF7a57T57IaCtaTt11B.1.177.40.000211
ORF7a57T57delACT---11B.1.177.50.001242
ORF7a57T57delACT---11B.1.177.500.004695
ORF7a57T57delACT---11B.1.177.530.002392
ORF7a57T57delACT---11B.1.177.570.000281
ORF7a57T57IaCtaTt11B.1.177.570.000281
ORF7a57T57delACT---11B.1.177.620.001192
ORF7a57T57delACT---11B.1.177.630.002703
ORF7a57T57delACT---11B.1.177.70.000165
ORF7a57T57del1acTac-11B.1.177.80.000752
ORF7a57T57del1acTac-11B.1.177.810.000189
ORF7a57T57delACT---11B.1.177.830.001481
ORF7a57T57TacTacC11B.1.177.860.000183
ORF7a57T57NaCtaAt11B.1.20.000009
ORF7a57T57AActGct11B.1.20.000009
ORF7a57T57IaCtaTt11B.1.20.000009
ORF7a57T57AActGct11B.1.2340.000132
ORF7a57T57delACT---11B.1.2360.002053
ORF7a57T57delACT---11B.1.2400.000216
ORF7a57T57IaCtaTt11B.1.2580.000067
ORF7a57T57del1acTac-11B.1.2580.000067
ORF7a57T57delACT---11B.1.258.170.000104
ORF7a57T57delACT---11B.1.2650.001271
ORF7a57T57TacTacA11B.1.3110.000275
ORF7a57T57NaCtaAt11B.1.3510.00003
ORF7a57T57QACTCAA11B.1.3510.00003
ORF7a57T57FACtTTt11B.1.3510.00003
ORF7a57T57HACtCAt11B.1.3510.00003
ORF7a57T57delACT---11B.1.351.30.000876
ORF7a57T57IaCtaTt11B.1.3560.001727
ORF7a57T57delACT---11B.1.36.350.002604
ORF7a57T57delACT---11B.1.3710.001122
ORF7a57T57del1acTac-11B.1.3890.001002
ORF7a57T57NaCtaAt11B.1.3980.002976
ORF7a57T57delACT---11B.1.4010.008197
ORF7a57T57delACT---11B.1.4060.006061
ORF7a57T57IaCtaTt11B.1.4290.000024
ORF7a57T57delACT---11B.1.438.10.000107
ORF7a57T57delACT---11B.1.4590.004082
ORF7a57T57TacTacC11B.1.466.20.000391
ORF7a57T57NaCtaAt11B.1.466.20.000391
ORF7a57T57delACT---11B.1.466.20.000391
ORF7a57T57delACT---11B.1.4680.005714
ORF7a57T57delACT---11B.1.4970.000315
ORF7a57T57AActGct11B.1.4970.000315
ORF7a57T57delACT---11B.1.5170.000427
ORF7a57T57del2ACT--N11B.1.5250.000113
ORF7a57T57del1acTac-11B.1.5250.000113
ORF7a57T57AActGct11B.1.5250.000113
ORF7a57T57AActGct11B.1.5260.000024
ORF7a57T57del2aCTa--11B.1.5260.000024
ORF7a57T57del1acTac-11B.1.5340.0125
ORF7a57T57delACT---11B.1.5350.028571
ORF7a57T57SActTct11B.1.5610.000397
ORF7a57T57del1acTac-11B.1.5640.000426
ORF7a57T57delACT---11B.1.5650.00081
ORF7a57T57del1acTac-11B.1.5650.00081
ORF7a57T57delACT---11B.1.5680.001111
ORF7a57T57delACT---11B.1.5760.000907
ORF7a57T57TacTacG11B.1.5800.004065
ORF7a57T57TacTacA11B.1.5880.00091
ORF7a57T57TacTacG11B.1.5960.000087
ORF7a57T57IaCtaTt11B.1.5970.00463
ORF7a57T57TacTacC11B.1.6000.005848
ORF7a57T57del1acTac-11B.1.6090.000479
ORF7a57T57TacTacG11B.1.6120.002653
ORF7a57T57delACT---11B.1.617.10.000129
ORF7a57T57del2ACt--t11B.1.617.10.000129
ORF7a57T57EACTGAA11B.1.617.20.000004
ORF7a57T57MaCTaTG11B.1.617.20.000004
ORF7a57T57IaCtaTt11B.1.617.30.002985
ORF7a57T57del1acTac-11B.1.6270.00202
ORF7a57T57del1acTac-11B.1.6370.000073
ORF7a57T57delACT---11B.1.6380.052632
ORF7a57T57delACT---11B.1.9.10.032258
ORF7a57T57delACT---11B.110.005128
ORF7a57T57delACT---11B.390.002331
ORF7a57T57IaCtaTt11C.350.000774
ORF7a57T57del1acTac-11C.370.000116
ORF7a57T57NaCtaAt11C.370.000116
ORF7a57T57TacTacC11C.37.10.002618
ORF7a57T57delACT---11K.30.006173
ORF7a57T57TacTacC11L.30.003546
ORF7a57T57NaCtaAt11P.10.000016
ORF7a57T57delACT---11P.1.10.000318
ORF7a57T57delACT---11P.1.130.000898
ORF7a57T57delACT---11P.1.170.000162
ORF7a57T57delACT---11P.1.30.034483
ORF7a57T57AActGct11P.1.40.000977
ORF7a57T57delACT---11P.1.40.000977
ORF7a57T57IaCtaTt11P.20.000187
ORF7a57T57delACT---11Q.70.001111
ORF7a57T57SActTct11Q.80.000165
ORF7a57T57TacTacC11R.10.00009
ORF7a57T57del1acTac-11R.10.00009
ORF7a57T57AActGct11W.40.001351