CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 56 & Codon = ctC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56LsynctGctC124894810.038513927559-27561

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56LctGctC48112489All0.000092
ORF7a56L56LctGctC13942B.1.1.70.000012
ORF7a56L56LctGctC153750AY.40.000238
ORF7a56L56LctGctC2649B.10.000018
ORF7a56L56LctGctC6520B.1.617.20.000023
ORF7a56L56LctGctC4442AY.1030.000025
ORF7a56L56LctGctC261267AY.99.20.024053
ORF7a56L56LctGctC3237AY.430.000013
ORF7a56L56LctGctC2224AY.250.000012
ORF7a56L56LctGctC8131B.1.20.00007
ORF7a56L56LctGctC2108AY.4.20.000043
ORF7a56L56LctGctC139AY.390.000025
ORF7a56L56LctGctC230AY.1020.000053
ORF7a56L56LctGctC120AY.290.000016
ORF7a56L56LctGctC112B.1.4270.00005
ORF7a56L56LctGctC19Q.10.000126
ORF7a56L56LctGctC88B.1.5950.002088
ORF7a56L56LctGctC16AY.980.000079
ORF7a56L56LctGctC25AY.360.000296
ORF7a56L56LctGctC15B.1.6370.000073
ORF7a56L56LctGctC13AY.140.000088
ORF7a56L56LctGctC23AY.550.001835
ORF7a56L56LctGctC12AY.270.000065
ORF7a56L56LctGctC12AY.7.10.000113
ORF7a56L56LctGctC11AY.700.000209
ORF7a56L56LctGctC11B.1.1.3470.018182
ORF7a56L56LctGctC11B.1.1080.005814
ORF7a56L56LctGctC11B.1.428.20.033333