CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 56 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56LsynctGctA124891870.014973227559-27561

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56LctGctA18712489All0.000036
ORF7a56L56LctGctA92942B.1.1.70.000082
ORF7a56L56LctGctA16750AY.40.000025
ORF7a56L56LctGctA1649B.10.000009
ORF7a56L56LctGctA4520B.1.617.20.000015
ORF7a56L56LctGctA4442AY.1030.000025
ORF7a56L56LctGctA1237AY.430.000004
ORF7a56L56LctGctA7224AY.250.000042
ORF7a56L56LctGctA2212AY.440.000012
ORF7a56L56LctGctA1131B.1.20.000009
ORF7a56L56LctGctA9108AY.4.20.000195
ORF7a56L56LctGctA150B.1.10.000018
ORF7a56L56LctGctA239AY.390.000049
ORF7a56L56LctGctA832B.1.5260.000188
ORF7a56L56LctGctA328AY.50.000062
ORF7a56L56LctGctA128B.1.1.5190.00004
ORF7a56L56LctGctA226B.1.3510.000059
ORF7a56L56LctGctA122B.1.4290.000024
ORF7a56L56LctGctA120AY.290.000016
ORF7a56L56LctGctA316B.1.1.2220.000612
ORF7a56L56LctGctA310B.1.5750.00091
ORF7a56L56LctGctA48AY.1160.001147
ORF7a56L56LctGctA38B.1.177.210.000229
ORF7a56L56LctGctA18B.1.6210.000089
ORF7a56L56LctGctA17AY.470.000031
ORF7a56L56LctGctA250.111111
ORF7a56L56LctGctA15AY.610.000105
ORF7a56L56LctGctA15B.1.2430.00007
ORF7a56L56LctGctA25B.1.6370.000146
ORF7a56L56LctGctA13B0.000128
ORF7a56L56LctGctA33B.1.1.930.076923
ORF7a56L56LctGctA22B.1.221.40.008333
ORF7a56L56LctGctA12B.1.466.20.000391
ORF7a56L56LctGctA12B.1.5170.000427
ORF7a56L56LctGctA11AY.4.2.10.000149
ORF7a56L56LctGctA11B.1.36.360.000602