CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 56 & Codon = Ttg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56LsynCtgTtg1248959410.47569927559-27561

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56LCtgTtg594112489All0.001136
ORF7a56L56LCtgTtg51465146AY.690.960612
ORF7a56L56LCtgTtg248942B.1.1.70.000222
ORF7a56L56LCtgTtg68750AY.40.000106
ORF7a56L56LCtgTtg9649B.10.000082
ORF7a56L56LCtgTtg124520B.1.617.20.000467
ORF7a56L56LCtgTtg8442AY.1030.00005
ORF7a56L56LCtgTtg16237AY.430.000071
ORF7a56L56LCtgTtg72224AY.250.000433
ORF7a56L56LCtgTtg7212AY.440.000043
ORF7a56L56LCtgTtg3164B.1.1.2840.000322
ORF7a56L56LCtgTtg2131B.1.20.000018
ORF7a56L56LCtgTtg1988AY.30.000189
ORF7a56L56LCtgTtg586P.10.000079
ORF7a56L56LCtgTtg366B.1.1770.00004
ORF7a56L56LCtgTtg1350B.1.10.000236
ORF7a56L56LCtgTtg4345B.400.015665
ORF7a56L56LCtgTtg439AY.390.000099
ORF7a56L56LCtgTtg233AY.330.000134
ORF7a56L56LCtgTtg332B.1.5260.000071
ORF7a56L56LCtgTtg230AY.1020.000053
ORF7a56L56LCtgTtg128AY.50.000021
ORF7a56L56LCtgTtg228B.1.1.5190.000079
ORF7a56L56LCtgTtg126B.1.3510.00003
ORF7a56L56LCtgTtg325AY.460.000312
ORF7a56L56LCtgTtg422B.1.4290.000094
ORF7a56L56LCtgTtg1122P.1.70.003512
ORF7a56L56LCtgTtg919B.1.617.10.001161
ORF7a56L56LCtgTtg316B.1.1.2220.000612
ORF7a56L56LCtgTtg215AY.340.000194
ORF7a56L56LCtgTtg115AY.98.10.000048
ORF7a56L56LCtgTtg114AY.200.000039
ORF7a56L56LCtgTtg213B.1.6190.001742
ORF7a56L56LCtgTtg412B.1.4270.000202
ORF7a56L56LCtgTtg211B.1.36.170.000988
ORF7a56L56LCtgTtg110AY.4.50.000107
ORF7a56L56LCtgTtg110AY.46.60.000072
ORF7a56L56LCtgTtg710B.1.5750.002124
ORF7a56L56LCtgTtg110C.370.000116
ORF7a56L56LCtgTtg19AY.1190.000035
ORF7a56L56LCtgTtg88B.1.258.220.021333
ORF7a56L56LCtgTtg78B.1.619.10.00449
ORF7a56L56LCtgTtg38B.1.6210.000266
ORF7a56L56LCtgTtg68C.160.006363
ORF7a56L56LCtgTtg88N.40.034043
ORF7a56L56LCtgTtg17AY.470.000031
ORF7a56L56LCtgTtg17AY.720.001361
ORF7a56L56LCtgTtg26AY.300.000791
ORF7a56L56LCtgTtg36AY.39.10.000119
ORF7a56L56LCtgTtg15AY.360.000148
ORF7a56L56LCtgTtg15AY.5.40.000277
ORF7a56L56LCtgTtg15AY.590.00053
ORF7a56L56LCtgTtg25B.1.1.280.000622
ORF7a56L56LCtgTtg55B.1.2340.00066
ORF7a56L56LCtgTtg45C.36.30.002269
ORF7a56L56LCtgTtg34B.1.1.500.002037
ORF7a56L56LCtgTtg44B.1.177.80.00301
ORF7a56L56LCtgTtg24B.1.4990.002101
ORF7a56L56LCtgTtg23AY.130.000322
ORF7a56L56LCtgTtg13B.1.2060.000816
ORF7a56L56LCtgTtg13Q.80.000165
ORF7a56L56LCtgTtg12AY.1070.000466
ORF7a56L56LCtgTtg12AY.190.00114
ORF7a56L56LCtgTtg22AY.320.001065
ORF7a56L56LCtgTtg12AY.7.20.000559
ORF7a56L56LCtgTtg22B.1.1.2300.018349
ORF7a56L56LCtgTtg22B.1.177.880.024691
ORF7a56L56LCtgTtg11A.210.00277
ORF7a56L56LCtgTtg11AY.1110.000183
ORF7a56L56LCtgTtg11AY.370.000316
ORF7a56L56LCtgTtg11AY.570.000656
ORF7a56L56LCtgTtg11B.1.1.1890.001513
ORF7a56L56LCtgTtg11B.1.1.510.001718
ORF7a56L56LCtgTtg11B.1.1660.008475
ORF7a56L56LCtgTtg11B.1.2360.002053
ORF7a56L56LCtgTtg11B.1.258.90.005
ORF7a56L56LCtgTtg11B.1.5520.015152
ORF7a56L56LCtgTtg11B.1.5730.006098
ORF7a56L56LCtgTtg11P.1.170.000162