CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 55 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a55A55AsyngcAgcT205730.35609827556-27558

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a55A55AgcAgcT73205All0.000014
ORF7a55A55AgcAgcT335AY.40.000005
ORF7a55A55AgcAgcT1135B.1.1.70.00001
ORF7a55A55AgcAgcT2324AY.120.10.007384
ORF7a55A55AgcAgcT612B.1.617.20.000023
ORF7a55A55AgcAgcT59AY.250.00003
ORF7a55A55AgcAgcT17B.1.5250.000113
ORF7a55A55AgcAgcT44AY.1130.00057
ORF7a55A55AgcAgcT24AY.430.000009
ORF7a55A55AgcAgcT14P.10.000016
ORF7a55A55AgcAgcT13AY.390.000025
ORF7a55A55AgcAgcT13AY.440.000006
ORF7a55A55AgcAgcT13B.10.000009
ORF7a55A55AgcAgcT13B.1.3510.00003
ORF7a55A55AgcAgcT220.111111
ORF7a55A55AgcAgcT22AY.330.000134
ORF7a55A55AgcAgcT22B.1.1.3230.028169
ORF7a55A55AgcAgcT11AY.10.000396
ORF7a55A55AgcAgcT11AY.1170.000085
ORF7a55A55AgcAgcT11AY.130.000161
ORF7a55A55AgcAgcT11AY.470.000031
ORF7a55A55AgcAgcT11AY.5.30.000337
ORF7a55A55AgcAgcT11AY.750.000056
ORF7a55A55AgcAgcT11B.1.1.5190.00004