CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 55 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a55A55PnonsynGcaCca41400.9756127556-27558

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a55A55PGcaCca4041All0.000008
ORF7a55A55PGcaCca77AY.250.000042
ORF7a55A55PGcaCca55B.1.1.70.000004
ORF7a55A55PGcaCca22AY.40.000003
ORF7a55A55PGcaCca22AY.99.20.000184
ORF7a55A55PGcaCca22B.1.20.000018
ORF7a55A55PGcaCca12B.1.5250.000113
ORF7a55A55PGcaCca22B.1.617.20.000008
ORF7a55A55PGcaCca11AY.200.000039
ORF7a55A55PGcaCca11AY.270.000065
ORF7a55A55PGcaCca11AY.290.000016
ORF7a55A55PGcaCca11AY.30.00001
ORF7a55A55PGcaCca11AY.330.000067
ORF7a55A55PGcaCca11AY.39.10.00004
ORF7a55A55PGcaCca11AY.430.000004
ORF7a55A55PGcaCca11AY.50.000021
ORF7a55A55PGcaCca11B.10.000009
ORF7a55A55PGcaCca11B.1.1.4110.014706
ORF7a55A55PGcaCca11B.1.3320.003497
ORF7a55A55PGcaCca11B.1.3510.00003
ORF7a55A55PGcaCca11B.1.36.250.002208
ORF7a55A55PGcaCca11B.1.4970.000315
ORF7a55A55PGcaCca11B.1.4990.00105
ORF7a55A55PGcaCca11B.1.5260.000024
ORF7a55A55PGcaCca11B.1.5960.000087
ORF7a55A55PGcaCca11B.1.6370.000073
ORF7a55A55PGcaCca11D.20.000075