CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 54 & Codon = tt-

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a54F54del1delttTtt-405034680.85629627553-27555

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a54F54del1ttTtt-34684050All0.000663
ORF7a54F54del1ttTtt-12481409AY.40.001942
ORF7a54F54del1ttTtt-324519AY.250.001949
ORF7a54F54del1ttTtt-386397B.1.1.70.000346
ORF7a54F54del1ttTtt-276278AY.260.007814
ORF7a54F54del1ttTtt-232240AY.430.001028
ORF7a54F54del1ttTtt-108124AY.1030.000671
ORF7a54F54del1ttTtt-92123B.1.617.20.000346
ORF7a54F54del1ttTtt-110114AY.390.002718
ORF7a54F54del1ttTtt-103106AY.290.001625
ORF7a54F54del1ttTtt-6190AY.440.000371
ORF7a54F54del1ttTtt-7181AY.30.000706
ORF7a54F54del1ttTtt-6165AY.4.20.001323
ORF7a54F54del1ttTtt-232AY.70.000392
ORF7a54F54del1ttTtt-1028AY.1000.00046
ORF7a54F54del1ttTtt-2727AY.46.60.00195
ORF7a54F54del1ttTtt-425AY.39.10.000158
ORF7a54F54del1ttTtt-2424AY.1070.011184
ORF7a54F54del1ttTtt-2424AY.1200.000892
ORF7a54F54del1ttTtt-1923AY.470.000591
ORF7a54F54del1ttTtt-1522AY.50.00031
ORF7a54F54del1ttTtt-2020AY.60.000823
ORF7a54F54del1ttTtt-1515AY.450.001825
ORF7a54F54del1ttTtt-1313AY.200.000505
ORF7a54F54del1ttTtt-1313AY.300.005144
ORF7a54F54del1ttTtt-1313B.1.1.2580.042345
ORF7a54F54del1ttTtt-99AY.980.000711
ORF7a54F54del1ttTtt-78AY.1020.000186
ORF7a54F54del1ttTtt-88AY.1130.001139
ORF7a54F54del1ttTtt-88AY.1190.000282
ORF7a54F54del1ttTtt-17AY.900.000684
ORF7a54F54del1ttTtt-77P.10.00011
ORF7a54F54del1ttTtt-56AY.330.000334
ORF7a54F54del1ttTtt-66AY.98.10.000291
ORF7a54F54del1ttTtt-66B.1.20.000053
ORF7a54F54del1ttTtt-55AY.1180.000313
ORF7a54F54del1ttTtt-55AY.130.000805
ORF7a54F54del1ttTtt-55AY.350.001165
ORF7a54F54del1ttTtt-55AY.420.000201
ORF7a54F54del1ttTtt-44AY.1140.000924
ORF7a54F54del1ttTtt-34AY.230.000209
ORF7a54F54del1ttTtt-44AY.870.003331
ORF7a54F54del1ttTtt-44AY.90.00027
ORF7a54F54del1ttTtt-44AY.99.20.000369
ORF7a54F54del1ttTtt-44B.1.10.000073
ORF7a54F54del1ttTtt-44B.1.1600.000125
ORF7a54F54del1ttTtt-44Q.10.000505
ORF7a54F54del1ttTtt-33AY.3.10.000256
ORF7a54F54del1ttTtt-23AY.340.000194
ORF7a54F54del1ttTtt-13AY.460.000104
ORF7a54F54del1ttTtt-33AY.540.000286
ORF7a54F54del1ttTtt-33AY.620.001307
ORF7a54F54del1ttTtt-33AY.650.001599
ORF7a54F54del1ttTtt-33B.10.000027
ORF7a54F54del1ttTtt-33B.1.1770.00004
ORF7a54F54del1ttTtt-33B.1.3510.000089
ORF7a54F54del1ttTtt-33Q.80.000495
ORF7a54F54del1ttTtt-22AY.1090.001479
ORF7a54F54del1ttTtt-12AY.1170.000085
ORF7a54F54del1ttTtt-22AY.120.10.000642
ORF7a54F54del1ttTtt-22AY.20.000712
ORF7a54F54del1ttTtt-22AY.29.10.000441
ORF7a54F54del1ttTtt-22AY.46.40.000329
ORF7a54F54del1ttTtt-12AY.46.50.000198
ORF7a54F54del1ttTtt-22AY.490.00639
ORF7a54F54del1ttTtt-12AY.640.000595
ORF7a54F54del1ttTtt-22AY.7.20.001119
ORF7a54F54del1ttTtt-22B.1.1.2200.003717
ORF7a54F54del1ttTtt-22B.1.1.3720.001377
ORF7a54F54del1ttTtt-22B.1.1.5190.000079
ORF7a54F54del1ttTtt-22B.1.5250.000226
ORF7a54F54del1ttTtt-11AY.1100.000113
ORF7a54F54del1ttTtt-11AY.1160.000287
ORF7a54F54del1ttTtt-11AY.120.000316
ORF7a54F54del1ttTtt-11AY.1210.000135
ORF7a54F54del1ttTtt-11AY.140.000088
ORF7a54F54del1ttTtt-11AY.190.00114
ORF7a54F54del1ttTtt-11AY.220.002092
ORF7a54F54del1ttTtt-11AY.370.000316
ORF7a54F54del1ttTtt-11AY.4.40.000409
ORF7a54F54del1ttTtt-11AY.480.000465
ORF7a54F54del1ttTtt-11AY.520.000814
ORF7a54F54del1ttTtt-11AY.570.000656
ORF7a54F54del1ttTtt-11AY.610.000105
ORF7a54F54del1ttTtt-11AY.660.00107
ORF7a54F54del1ttTtt-11AY.7.10.000113
ORF7a54F54del1ttTtt-11AY.750.000056
ORF7a54F54del1ttTtt-11AY.790.001211
ORF7a54F54del1ttTtt-11AY.880.000884
ORF7a54F54del1ttTtt-11AY.960.002075
ORF7a54F54del1ttTtt-11B.1.1.1940.00495
ORF7a54F54del1ttTtt-11B.1.1.2050.003717
ORF7a54F54del1ttTtt-11B.1.1.2090.008929
ORF7a54F54del1ttTtt-11B.1.1.2410.00207
ORF7a54F54del1ttTtt-11B.1.1.2840.000107
ORF7a54F54del1ttTtt-11B.1.1.4320.001266
ORF7a54F54del1ttTtt-11B.1.160.160.000929
ORF7a54F54del1ttTtt-11B.1.177.210.000076
ORF7a54F54del1ttTtt-11B.1.214.20.0006
ORF7a54F54del1ttTtt-11B.1.2360.002053
ORF7a54F54del1ttTtt-11B.1.2580.000067
ORF7a54F54del1ttTtt-11B.1.258.90.005
ORF7a54F54del1ttTtt-11B.1.36.350.002604
ORF7a54F54del1ttTtt-11B.1.416.10.001563
ORF7a54F54del1ttTtt-11B.1.5750.000303
ORF7a54F54del1ttTtt-11B.1.6210.000089
ORF7a54F54del1ttTtt-11B.110.005128
ORF7a54F54del1ttTtt-11C.36.30.000567