CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 54 & Codon = -tt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a54F54del1delTtt-tt40505750.14197527553-27555

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a54F54del1Ttt-tt5754050All0.00011
ORF7a54F54del1Ttt-tt1611409AY.40.000251
ORF7a54F54del1Ttt-tt195519AY.250.001173
ORF7a54F54del1Ttt-tt11397B.1.1.70.00001
ORF7a54F54del1Ttt-tt2278AY.260.000057
ORF7a54F54del1Ttt-tt7240AY.430.000031
ORF7a54F54del1Ttt-tt16124AY.1030.000099
ORF7a54F54del1Ttt-tt30123B.1.617.20.000113
ORF7a54F54del1Ttt-tt3114AY.390.000074
ORF7a54F54del1Ttt-tt3106AY.290.000047
ORF7a54F54del1Ttt-tt2890AY.440.00017
ORF7a54F54del1Ttt-tt1081AY.30.000099
ORF7a54F54del1Ttt-tt465AY.4.20.000087
ORF7a54F54del1Ttt-tt3032AY.70.00588
ORF7a54F54del1Ttt-tt1828AY.1000.000828
ORF7a54F54del1Ttt-tt2125AY.39.10.000832
ORF7a54F54del1Ttt-tt423AY.470.000124
ORF7a54F54del1Ttt-tt722AY.50.000145
ORF7a54F54del1Ttt-tt18AY.1020.000027
ORF7a54F54del1Ttt-tt67AY.900.004107
ORF7a54F54del1Ttt-tt16AY.330.000067
ORF7a54F54del1Ttt-tt14AY.230.00007
ORF7a54F54del1Ttt-tt13AY.340.000097
ORF7a54F54del1Ttt-tt23AY.460.000208
ORF7a54F54del1Ttt-tt12AY.1170.000085
ORF7a54F54del1Ttt-tt22AY.4.2.10.000298
ORF7a54F54del1Ttt-tt12AY.46.50.000198
ORF7a54F54del1Ttt-tt12AY.640.000595
ORF7a54F54del1Ttt-tt22AY.730.001331
ORF7a54F54del1Ttt-tt11AY.10.000396
ORF7a54F54del1Ttt-tt11AY.1110.000183
ORF7a54F54del1Ttt-tt11AY.240.000431
ORF7a54F54del1Ttt-tt11AY.360.000148
ORF7a54F54del1Ttt-tt11AY.9.10.000084
ORF7a54F54del1Ttt-tt11B.1.6300.005236