CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 52 & Codon = aTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52InonsynaAcaTc52260.527547-27549

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52IaAcaTc2652All0.000005
ORF7a52N52IaAcaTc216AY.250.000012
ORF7a52N52IaAcaTc49B.1.617.20.000015
ORF7a52N52IaAcaTc66AY.440.000037
ORF7a52N52IaAcaTc14B.1.1.70.000001
ORF7a52N52IaAcaTc22AY.1020.000053
ORF7a52N52IaAcaTc22AY.40.000003
ORF7a52N52IaAcaTc11AY.1030.000006
ORF7a52N52IaAcaTc11AY.1200.000037
ORF7a52N52IaAcaTc11AY.390.000025
ORF7a52N52IaAcaTc11AY.450.000122
ORF7a52N52IaAcaTc11AY.460.000104
ORF7a52N52IaAcaTc11AY.610.000105
ORF7a52N52IaAcaTc11B.10.000009
ORF7a52N52IaAcaTc11B.1.1770.000013
ORF7a52N52IaAcaTc11B.1.5150.014493