CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 52 & Codon = aGc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52SnonsynaAcaGc72580.80555627547-27549

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52SaAcaGc5872All0.000011
ORF7a52N52SaAcaGc1111D.20.000825
ORF7a52N52SaAcaGc210AY.250.000012
ORF7a52N52SaAcaGc1010P.1.100.002695
ORF7a52N52SaAcaGc56B.1.1.70.000004
ORF7a52N52SaAcaGc46B.1.617.20.000015
ORF7a52N52SaAcaGc33P.1.10.000953
ORF7a52N52SaAcaGc12AY.1190.000035
ORF7a52N52SaAcaGc22AY.30.00002
ORF7a52N52SaAcaGc22AY.40.000003
ORF7a52N52SaAcaGc22B.10.000018
ORF7a52N52SaAcaGc22C.140.008658
ORF7a52N52SaAcaGc11AY.290.000016
ORF7a52N52SaAcaGc11AY.39.10.00004
ORF7a52N52SaAcaGc11AY.430.000004
ORF7a52N52SaAcaGc11AY.450.000122
ORF7a52N52SaAcaGc11AY.46.20.000635
ORF7a52N52SaAcaGc11AY.600.000938
ORF7a52N52SaAcaGc11AY.9.10.000084
ORF7a52N52SaAcaGc11AY.9.20.000037
ORF7a52N52SaAcaGc11B.1.1.3180.000302
ORF7a52N52SaAcaGc11B.1.1.5190.00004
ORF7a52N52SaAcaGc11B.1.1770.000013
ORF7a52N52SaAcaGc11B.1.20.000009
ORF7a52N52SaAcaGc11B.1.4290.000024
ORF7a52N52SaAcaGc11B.1.5750.000303