CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 52 & Codon = a--

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52del2delaACa--181218070.99724127547-27549

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52del2aACa--18071812All0.000346
ORF7a52N52del2aACa--659660B.1.617.20.002481
ORF7a52N52del2aACa--566566AY.430.002508
ORF7a52N52del2aACa--111111AY.40.000173
ORF7a52N52del2aACa--8383AY.250.000499
ORF7a52N52del2aACa--3737AY.1030.00023
ORF7a52N52del2aACa--3333AY.460.003435
ORF7a52N52del2aACa--3233B.1.1.70.000029
ORF7a52N52del2aACa--2828AY.290.000442
ORF7a52N52del2aACa--2525AY.1180.001566
ORF7a52N52del2aACa--2222AY.440.000134
ORF7a52N52del2aACa--1818AY.260.00051
ORF7a52N52del2aACa--1818AY.30.000179
ORF7a52N52del2aACa--1313B.1.1770.000171
ORF7a52N52del2aACa--1010AY.1200.000372
ORF7a52N52del2aACa--99AY.120.002845
ORF7a52N52del2aACa--99AY.990.009444
ORF7a52N52del2aACa--88AY.50.000165
ORF7a52N52del2aACa--77AY.7.10.000789
ORF7a52N52del2aACa--77B.1.1.2840.000752
ORF7a52N52del2aACa--77P.10.00011
ORF7a52N52del2aACa--66AY.100.00318
ORF7a52N52del2aACa--66AY.1020.000159
ORF7a52N52del2aACa--56AY.1190.000177
ORF7a52N52del2aACa--66AY.390.000148
ORF7a52N52del2aACa--66B.1.1.30.052174
ORF7a52N52del2aACa--55AY.1000.00023
ORF7a52N52del2aACa--55AY.98.10.000242
ORF7a52N52del2aACa--44AY.1070.001864
ORF7a52N52del2aACa--44AY.140.000352
ORF7a52N52del2aACa--44AY.240.001724
ORF7a52N52del2aACa--44AY.330.000267
ORF7a52N52del2aACa--33AY.1100.000338
ORF7a52N52del2aACa--33AY.1170.000254
ORF7a52N52del2aACa--33AY.230.000209
ORF7a52N52del2aACa--33AY.46.60.000217
ORF7a52N52del2aACa--33AY.470.000093
ORF7a52N52del2aACa--22AY.340.000194
ORF7a52N52del2aACa--22AY.360.000296
ORF7a52N52del2aACa--22AY.4.20.000043
ORF7a52N52del2aACa--22AY.420.00008
ORF7a52N52del2aACa--22AY.880.001768
ORF7a52N52del2aACa--22AY.9.10.000167
ORF7a52N52del2aACa--22AY.980.000158
ORF7a52N52del2aACa--22AY.99.20.000184
ORF7a52N52del2aACa--12B.1.20.000009
ORF7a52N52del2aACa--22B.1.3510.000059
ORF7a52N52del2aACa--11AY.10.000396
ORF7a52N52del2aACa--11AY.1130.000142
ORF7a52N52del2aACa--11AY.120.10.000321
ORF7a52N52del2aACa--11AY.200.000039
ORF7a52N52del2aACa--11AY.29.10.000221
ORF7a52N52del2aACa--11AY.3.10.000085
ORF7a52N52del2aACa--11AY.39.10.00004
ORF7a52N52del2aACa--11AY.4.40.000409
ORF7a52N52del2aACa--11AY.4.50.000107
ORF7a52N52del2aACa--11AY.530.000288
ORF7a52N52del2aACa--11AY.540.000095
ORF7a52N52del2aACa--11AY.60.000041
ORF7a52N52del2aACa--11AY.730.000665
ORF7a52N52del2aACa--11AY.9.20.000037
ORF7a52N52del2aACa--11B.1.1.2580.003257
ORF7a52N52del2aACa--11B.1.5670.003333