CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 5 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a5L5LsynctTctA7782710.34832927406-27408

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a5L5LctTctA271778All0.000052
ORF7a5L5LctTctA30187B.1.1.70.000027
ORF7a5L5LctTctA132138AY.50.002726
ORF7a5L5LctTctA360AY.40.000005
ORF7a5L5LctTctA244B.1.617.20.000008
ORF7a5L5LctTctA4041AY.1030.000248
ORF7a5L5LctTctA2028B.1.4290.000471
ORF7a5L5LctTctA2525AY.330.001669
ORF7a5L5LctTctA118B.1.5960.000087
ORF7a5L5LctTctA113AY.440.000006
ORF7a5L5LctTctA412AY.250.000024
ORF7a5L5LctTctA111AY.430.000004
ORF7a5L5LctTctA34AY.60.000123
ORF7a5L5LctTctA23AY.1020.000053
ORF7a5L5LctTctA22AY.840.000875
ORF7a5L5LctTctA11AY.1110.000183
ORF7a5L5LctTctA11AY.580.000907
ORF7a5L5LctTctA11B.1.1.330.000421
ORF7a5L5LctTctA11B.1.214.20.0006
ORF7a5L5LctTctA11C.180.002591