CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 5 & Codon = cCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a5L5PnonsyncTtcCt297428710.96536627406-27408

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a5L5PcTtcCt28712974All0.000549
ORF7a5L5PcTtcCt25362536AY.40.003947
ORF7a5L5PcTtcCt2763AY.850.011534
ORF7a5L5PcTtcCt5055B.1.617.20.000188
ORF7a5L5PcTtcCt3540B.1.1.70.000031
ORF7a5L5PcTtcCt3434R.10.00306
ORF7a5L5PcTtcCt1527P.10.000236
ORF7a5L5PcTtcCt416AY.300.001583
ORF7a5L5PcTtcCt1616B.1.1.3320.5
ORF7a5L5PcTtcCt1113AY.430.000049
ORF7a5L5PcTtcCt1111B.10.000101
ORF7a5L5PcTtcCt410AY.390.000099
ORF7a5L5PcTtcCt1010B.1.1770.000132
ORF7a5L5PcTtcCt88AY.250.000048
ORF7a5L5PcTtcCt67AY.1020.000159
ORF7a5L5PcTtcCt37AY.39.10.000119
ORF7a5L5PcTtcCt77B.1.20.000062
ORF7a5L5PcTtcCt77B.1.4090.005469
ORF7a5L5PcTtcCt66AY.30.00006
ORF7a5L5PcTtcCt25AY.1010.000981
ORF7a5L5PcTtcCt55AY.1160.001434
ORF7a5L5PcTtcCt55B.1.5260.000118
ORF7a5L5PcTtcCt25P.20.000373
ORF7a5L5PcTtcCt44AY.420.000161
ORF7a5L5PcTtcCt24AY.620.000871
ORF7a5L5PcTtcCt24AY.670.000929
ORF7a5L5PcTtcCt44B.1.10.000073
ORF7a5L5PcTtcCt23AY.470.000062
ORF7a5L5PcTtcCt23AY.99.20.000184
ORF7a5L5PcTtcCt33B.1.6210.000266
ORF7a5L5PcTtcCt12AY.1030.000006
ORF7a5L5PcTtcCt22AY.1170.000169
ORF7a5L5PcTtcCt22AY.440.000012
ORF7a5L5PcTtcCt12AY.460.000104
ORF7a5L5PcTtcCt22AY.9.20.000073
ORF7a5L5PcTtcCt22B.1.2210.000142
ORF7a5L5PcTtcCt22B.1.2430.000139
ORF7a5L5PcTtcCt22B.1.617.10.000258
ORF7a5L5PcTtcCt12P.1.120.000484
ORF7a5L5PcTtcCt12P.70.004367
ORF7a5L5PcTtcCt11AD.20.000219
ORF7a5L5PcTtcCt11AY.1050.000643
ORF7a5L5PcTtcCt11AY.1110.000183
ORF7a5L5PcTtcCt11AY.1190.000035
ORF7a5L5PcTtcCt11AY.23.10.000417
ORF7a5L5PcTtcCt11AY.270.000065
ORF7a5L5PcTtcCt11AY.290.000016
ORF7a5L5PcTtcCt11AY.330.000067
ORF7a5L5PcTtcCt11AY.4.50.000107
ORF7a5L5PcTtcCt11AY.730.000665
ORF7a5L5PcTtcCt11AY.90.000068
ORF7a5L5PcTtcCt11AY.9.10.000084
ORF7a5L5PcTtcCt11B0.000128
ORF7a5L5PcTtcCt11B.1.1.2220.000204
ORF7a5L5PcTtcCt11B.1.1.280.000311
ORF7a5L5PcTtcCt11B.1.1.2840.000107
ORF7a5L5PcTtcCt11B.1.1.370.000193
ORF7a5L5PcTtcCt11B.1.1.5190.00004
ORF7a5L5PcTtcCt11B.1.177.420.000894
ORF7a5L5PcTtcCt11B.1.177.600.000218
ORF7a5L5PcTtcCt11B.1.2230.002778
ORF7a5L5PcTtcCt11B.1.3490.000715
ORF7a5L5PcTtcCt11B.1.3510.00003
ORF7a5L5PcTtcCt11B.1.4270.00005
ORF7a5L5PcTtcCt11B.1.4290.000024
ORF7a5L5PcTtcCt11B.1.438.10.000107
ORF7a5L5PcTtcCt11B.1.4690.00361
ORF7a5L5PcTtcCt11B.1.5680.001111
ORF7a5L5PcTtcCt11B.1.5960.000087
ORF7a5L5PcTtcCt11D.20.000075
ORF7a5L5PcTtcCt11P.1.80.004785
ORF7a5L5PcTtcCt11U.30.003861