CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 5 & Codon = cCG

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a5L5PnonsyncTTcCG29741010.03396127406-27408

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a5L5PcTTcCG1012974All0.000019
ORF7a5L5PcTTcCG3663AY.850.015378
ORF7a5L5PcTTcCG555B.1.617.20.000019
ORF7a5L5PcTTcCG540B.1.1.70.000004
ORF7a5L5PcTTcCG1127P.10.000173
ORF7a5L5PcTTcCG1216AY.300.004749
ORF7a5L5PcTTcCG213AY.430.000009
ORF7a5L5PcTTcCG610AY.390.000148
ORF7a5L5PcTTcCG17AY.1020.000027
ORF7a5L5PcTTcCG47AY.39.10.000158
ORF7a5L5PcTTcCG35AY.1010.001471
ORF7a5L5PcTTcCG35P.20.00056
ORF7a5L5PcTTcCG24AY.620.000871
ORF7a5L5PcTTcCG24AY.670.000929
ORF7a5L5PcTTcCG13AY.470.000031
ORF7a5L5PcTTcCG13AY.99.20.000092
ORF7a5L5PcTTcCG12AY.1030.000006
ORF7a5L5PcTTcCG12AY.460.000104
ORF7a5L5PcTTcCG12P.1.120.000484
ORF7a5L5PcTTcCG12P.1.20.001156
ORF7a5L5PcTTcCG12P.70.004367
ORF7a5L5PcTTcCG11AY.46.10.001027
ORF7a5L5PcTTcCG11AY.790.001211