CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 5

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a5L5deldelCTT---64076407127406-27408
ORF7a5L5PnonsyncTtcCt297428710.96536627406-27408
ORF7a5L5PnonsyncTTcCG29741010.03396127406-27408
ORF7a5L5PnonsyncTTcCC297420.00067249527406-27408
ORF7a5L5FnonsynCttTtt222722260.99955127406-27408
ORF7a5L5FnonsynCtTTtC222710.00044903527406-27408
ORF7a5L5LsynctTctC7783700.47557827406-27408
ORF7a5L5LsynctTctA7782710.34832927406-27408
ORF7a5L5LsynctTctG7781370.17609327406-27408
ORF7a5L5InonsynCttAtt5065040.99604727406-27408
ORF7a5L5InonsynCtTAtC50620.0039525727406-27408
ORF7a5L5VnonsynCttGtt1451420.9793127406-27408
ORF7a5L5VnonsynCtTGtC14520.013793127406-27408
ORF7a5L5VnonsynCtTGtA14510.0068965527406-27408
ORF7a5L5RnonsyncTtcGt1261230.9761927406-27408
ORF7a5L5RnonsyncTTcGG12620.01587327406-27408
ORF7a5L5RnonsyncTTcGA12610.0079365127406-27408
ORF7a5L5del1delcTtc-t67450.67164227406-27408
ORF7a5L5del1delCtt-tt67160.23880627406-27408
ORF7a5L5del1delctTct-6720.029850727406-27408
ORF7a5L5del1delCtT-tN6720.029850727406-27408
ORF7a5L5del1delCtT-tC6710.014925427406-27408
ORF7a5L5del1delCTT-NN6710.014925427406-27408
ORF7a5L5HnonsyncTtcAt40390.97527406-27408
ORF7a5L5HnonsyncTTcAC4010.02527406-27408
ORF7a5L5del2delcTTc--19160.84210527406-27408
ORF7a5L5del2delCTT--N1930.15789527406-27408
ORF7a5L5SnonsynCTtTCt12100.83333327406-27408
ORF7a5L5SnonsynCTtAGt1220.16666727406-27408
ORF7a5L5TnonsynCTTACG540.827406-27408
ORF7a5L5TnonsynCTTACC510.227406-27408
ORF7a5L5CnonsynCTtTGt33127406-27408
ORF7a5L5GnonsynCTtGGt320.66666727406-27408
ORF7a5L5GnonsynCTTGGG310.33333327406-27408
ORF7a5L5DnonsynCTtGAt22127406-27408
ORF7a5L5NnonsynCTtAAt22127406-27408
ORF7a5L5MnonsynCtTAtG11127406-27408
ORF7a5L5KnonsynCTTAAG11127406-27408

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a5L5delCTT---64076407All0.001225
ORF7a5L5delCTT---57685768B.1.1.70.005164
ORF7a5L5PcTtcCt28712974All0.000549
ORF7a5L5PcTTcCG1012974All0.000019
ORF7a5L5PcTTcCC22974All0
ORF7a5L5PcTtcCt25362536AY.40.003947
ORF7a5L5FCttTtt22262227All0.000426
ORF7a5L5FCtTTtC12227All0
ORF7a5L5LctTctC370778All0.000071
ORF7a5L5LctTctA271778All0.000052
ORF7a5L5LctTctG137778All0.000026
ORF7a5L5FCttTtt750750B.1.1.70.000671
ORF7a5L5ICttAtt504506All0.000096
ORF7a5L5ICtTAtC2506All0
ORF7a5L5ICttAtt377377AY.40.000587
ORF7a5L5LctTctC144187B.1.1.70.000129
ORF7a5L5LctTctA30187B.1.1.70.000027
ORF7a5L5LctTctG13187B.1.1.70.000012
ORF7a5L5delCTT---179179B.1.177.210.013688
ORF7a5L5FCttTtt169169AY.40.000263
ORF7a5L5VCttGtt142145All0.000027
ORF7a5L5VCtTGtC2145All0
ORF7a5L5VCtTGtA1145All0
ORF7a5L5LctTctA132138AY.50.002726
ORF7a5L5LctTctG5138AY.50.000103
ORF7a5L5LctTctC1138AY.50.000021
ORF7a5L5delCTT---135135AY.40.00021
ORF7a5L5RcTtcGt123126All0.000024
ORF7a5L5RcTTcGG2126All0
ORF7a5L5RcTTcGA1126All0
ORF7a5L5RcTtcGt99101B.1.1.70.000089
ORF7a5L5RcTTcGG2101B.1.1.70.000002
ORF7a5L5FCttTtt8383AY.1030.000515
ORF7a5L5del1cTtc-t4567All0.000009
ORF7a5L5del1Ctt-tt1667All0.000003
ORF7a5L5del1ctTct-267All0
ORF7a5L5del1CtT-tN267All0
ORF7a5L5del1CTT-NN167All0
ORF7a5L5del1CtT-tC167All0
ORF7a5L5PcTTcCG3663AY.850.015378
ORF7a5L5PcTtcCt2763AY.850.011534
ORF7a5L5FCttTtt6363B.1.617.20.000237
ORF7a5L5FCttTtt6161B.1.20.000537
ORF7a5L5LctTctC5760AY.40.000089
ORF7a5L5LctTctA360AY.40.000005
ORF7a5L5VCttGtt5859B.1.1.70.000052
ORF7a5L5VCtTGtA159B.1.1.70.000001
ORF7a5L5PcTtcCt5055B.1.617.20.000188
ORF7a5L5PcTTcCG555B.1.617.20.000019
ORF7a5L5FCttTtt4646AY.1020.00122
ORF7a5L5FCttTtt4545B.10.000412
ORF7a5L5FCttTtt4444B.1.4270.002222
ORF7a5L5LctTctC2944B.1.617.20.000109
ORF7a5L5LctTctG1344B.1.617.20.000049
ORF7a5L5LctTctA244B.1.617.20.000008
ORF7a5L5LctTctA4041AY.1030.000248
ORF7a5L5LctTctC141AY.1030.000006
ORF7a5L5HcTtcAt3940All0.000007
ORF7a5L5HcTTcAC140All0
ORF7a5L5PcTtcCt3540B.1.1.70.000031
ORF7a5L5PcTTcCG540B.1.1.70.000004
ORF7a5L5FCttTtt4040B.1.4290.000941
ORF7a5L5FCttTtt3939B.1.5260.000917
ORF7a5L5FCttTtt3434AY.30.000338
ORF7a5L5PcTtcCt3434R.10.00306
ORF7a5L5FCttTtt3232AY.260.000906
ORF7a5L5FCttTtt3232B.1.3960.022583
ORF7a5L5FCttTtt3030P.10.000473
ORF7a5L5FCttTtt2929AY.750.001625
ORF7a5L5LctTctG2828AY.850.011961
ORF7a5L5LctTctA2028B.1.4290.000471
ORF7a5L5LctTctC828B.1.4290.000188
ORF7a5L5FCttTtt2727AY.250.000162
ORF7a5L5FCttTtt2727AY.360.004002
ORF7a5L5PcTtcCt1527P.10.000236
ORF7a5L5PcTTcCG1127P.10.000173
ORF7a5L5PcTTcCC127P.10.000016
ORF7a5L5LctTctA2525AY.330.001669
ORF7a5L5FCttTtt2525AY.440.000152
ORF7a5L5FCttTtt2525AZ.10.021683
ORF7a5L5FCttTtt2424B.1.1770.000316
ORF7a5L5FCttTtt2323B.1.10.000417
ORF7a5L5FCttTtt2323B.1.3510.000684
ORF7a5L5ICttAtt2222B.1.617.20.000083
ORF7a5L5delCTT---2121AY.290.000331
ORF7a5L5FCttTtt2121B.1.1.1890.03177
ORF7a5L5ICttAtt2121B.1.1.70.000019
ORF7a5L5FCttTtt2020B.1.1.5190.000794
ORF7a5L5del2cTTc--1619All0.000003
ORF7a5L5del2CTT--N319All0.000001
ORF7a5L5FCttTtt1919AY.1000.000874
ORF7a5L5VCttGtt1919AY.230.001325
ORF7a5L5FCttTtt1919B.1.3240.030498
ORF7a5L5LctTctG1919B.1.5650.015397
ORF7a5L5delCTT---1818AY.30.000179
ORF7a5L5FCttTtt1818AY.430.00008
ORF7a5L5LctTctC1718B.1.5960.001481
ORF7a5L5LctTctA118B.1.5960.000087
ORF7a5L5LctTctG1418P.10.000221
ORF7a5L5LctTctC418P.10.000063
ORF7a5L5delCTT---1616AY.250.000096
ORF7a5L5PcTTcCG1216AY.300.004749
ORF7a5L5PcTtcCt416AY.300.001583
ORF7a5L5PcTtcCt1616B.1.1.3320.5
ORF7a5L5FCttTtt1616B.1.2430.001113
ORF7a5L5FCttTtt1515AY.230.001046
ORF7a5L5ICttAtt1414AY.1030.000087
ORF7a5L5delCTT---1414AY.1030.000087
ORF7a5L5delCTT---1414AY.430.000062
ORF7a5L5FCttTtt1414AY.50.000289
ORF7a5L5delCTT---1414B.10.000128
ORF7a5L5FCttTtt1414B.1.1.2300.12844
ORF7a5L5FCttTtt1414B.1.2580.000932
ORF7a5L5delCTT---1414B.1.617.20.000053
ORF7a5L5FCttTtt1414C.370.001625
ORF7a5L5del1cTtc-t913AY.1030.000056
ORF7a5L5del1Ctt-tt413AY.1030.000025
ORF7a5L5PcTtcCt1113AY.430.000049
ORF7a5L5PcTTcCG213AY.430.000009
ORF7a5L5LctTctC1013AY.440.000061
ORF7a5L5LctTctG213AY.440.000012
ORF7a5L5LctTctA113AY.440.000006
ORF7a5L5SCTtTCt1012All0.000002
ORF7a5L5SCTtAGt212All0
ORF7a5L5LctTctC812AY.250.000048
ORF7a5L5LctTctA412AY.250.000024
ORF7a5L5delCTT---1212AY.390.000297
ORF7a5L5delCTT---1212AY.440.000073
ORF7a5L5FCttTtt1212B.1.177.430.017725
ORF7a5L5LctTctC1012B.1.20.000088
ORF7a5L5LctTctG212B.1.20.000018
ORF7a5L5FCttTtt1111AY.200.000428
ORF7a5L5LctTctG911AY.430.00004
ORF7a5L5LctTctC111AY.430.000004
ORF7a5L5LctTctA111AY.430.000004
ORF7a5L5FCttTtt1111AY.46.40.00181
ORF7a5L5PcTtcCt1111B.10.000101
ORF7a5L5PcTTcCG610AY.390.000148
ORF7a5L5PcTtcCt410AY.390.000099
ORF7a5L5PcTtcCt1010B.1.1770.000132
ORF7a5L5FCttTtt1010B.1.177.810.001893
ORF7a5L5del1cTtc-t910B.1.617.20.000034
ORF7a5L5del1Ctt-tt110B.1.617.20.000004
ORF7a5L5LctTctC1010C.370.001161
ORF7a5L5LctTctC99AY.1200.000335
ORF7a5L5delCTT---99B.1.1.2840.000967
ORF7a5L5FCttTtt99B.1.1.4340.003137
ORF7a5L5FCttTtt99B.1.177.50.01118
ORF7a5L5delCTT---99C.80.040179
ORF7a5L5del1cTtc-t88AY.1020.000212
ORF7a5L5FCttTtt88AY.1190.000282
ORF7a5L5PcTtcCt88AY.250.000048
ORF7a5L5FCttTtt88AY.290.000126
ORF7a5L5FCttTtt88AY.3.10.000682
ORF7a5L5FCttTtt88AY.390.000198
ORF7a5L5ICttAtt88AY.440.000049
ORF7a5L5FCttTtt88AY.470.000249
ORF7a5L5del1cTtc-t58B.1.1.70.000004
ORF7a5L5del1CtT-tN28B.1.1.70.000002
ORF7a5L5del1CTT-NN18B.1.1.70.000001
ORF7a5L5HcTtcAt88B.1.1600.00025
ORF7a5L5FCttTtt88B.1.1600.00025
ORF7a5L5VCttGtt88B.1.2580.000532
ORF7a5L5FCttTtt88B.1.3690.002282
ORF7a5L5VCttGtt88B.1.5250.000905
ORF7a5L5FCttTtt88B.400.002914
ORF7a5L5PcTtcCt67AY.1020.000159
ORF7a5L5PcTTcCG17AY.1020.000027
ORF7a5L5delCTT---77AY.1180.000439
ORF7a5L5PcTTcCG47AY.39.10.000158
ORF7a5L5PcTtcCt37AY.39.10.000119
ORF7a5L5SCTtTCt77AY.40.000011
ORF7a5L5delCTT---77B.1.1.2140.000388
ORF7a5L5delCTT---77B.1.1770.000092
ORF7a5L5PcTtcCt77B.1.20.000062
ORF7a5L5PcTtcCt77B.1.4090.005469
ORF7a5L5VCttGtt77B.1.4290.000165
ORF7a5L5delCTT---77C.370.000812
ORF7a5L5delCTT---77P.10.00011
ORF7a5L5ICttAtt66AY.250.000036
ORF7a5L5PcTtcCt66AY.30.00006
ORF7a5L5VCttGtt66AY.390.000148
ORF7a5L5delCTT---66AY.470.000187
ORF7a5L5FCttTtt66AY.570.003937
ORF7a5L5FCttTtt66B.1.1.1960.034286
ORF7a5L5FCttTtt66B.1.177.600.001311
ORF7a5L5delCTT---66B.1.20.000053
ORF7a5L5FCttTtt66B.1.258.170.000624
ORF7a5L5FCttTtt66B.1.351.20.001815
ORF7a5L5delCTT---66B.1.5260.000141
ORF7a5L5FCttTtt66B.1.5960.000523
ORF7a5L5FCttTtt66R.10.00054
ORF7a5L5TCTTACG45All0.000001
ORF7a5L5TCTTACC15All0
ORF7a5L5PcTTcCG35AY.1010.001471
ORF7a5L5PcTtcCt25AY.1010.000981
ORF7a5L5FCttTtt55AY.1060.001674
ORF7a5L5PcTtcCt55AY.1160.001434
ORF7a5L5delCTT---55AY.260.000142
ORF7a5L5FCttTtt45AY.330.000267
ORF7a5L5FCtTTtC15AY.330.000067
ORF7a5L5FCttTtt55AY.4.2.10.000745
ORF7a5L5FCttTtt55AY.420.000201
ORF7a5L5FCttTtt55AY.980.000395
ORF7a5L5delCTT---55AY.98.10.000242
ORF7a5L5FCttTtt55B.1.1.1530.005476
ORF7a5L5FCttTtt55B.1.177.170.004105
ORF7a5L5delCTT---55B.1.177.440.002595
ORF7a5L5PcTtcCt55B.1.5260.000118
ORF7a5L5PcTTcCG35P.20.00056
ORF7a5L5PcTtcCt25P.20.000373
ORF7a5L5delCTT---55Q.80.000825
ORF7a5L5HcTtcAt440.222222
ORF7a5L5delCTT---44AY.1060.00134
ORF7a5L5FCttTtt44AY.1180.000251
ORF7a5L5LctTctG44AY.300.001583
ORF7a5L5FCttTtt44AY.350.000932
ORF7a5L5ICttAtt44AY.390.000099
ORF7a5L5VCtTGtC24AY.40.000003
ORF7a5L5VCttGtt24AY.40.000003
ORF7a5L5PcTtcCt44AY.420.000161
ORF7a5L5VCttGtt44AY.430.000018
ORF7a5L5LctTctA34AY.60.000123
ORF7a5L5LctTctC14AY.60.000041
ORF7a5L5PcTTcCG24AY.620.000871
ORF7a5L5PcTtcCt24AY.620.000871
ORF7a5L5PcTTcCG24AY.670.000929
ORF7a5L5PcTtcCt24AY.670.000929
ORF7a5L5LctTctC34AY.99.20.000276
ORF7a5L5LctTctG14AY.99.20.000092
ORF7a5L5PcTtcCt44B.1.10.000073
ORF7a5L5delCTT---44B.1.10.000073
ORF7a5L5LctTctC34B.1.1770.00004
ORF7a5L5LctTctG14B.1.1770.000013
ORF7a5L5VCttGtt44B.1.20.000035
ORF7a5L5delCTT---44B.1.4290.000094
ORF7a5L5FCttTtt44B.1.9.40.02454
ORF7a5L5FCttTtt44D.20.0003
ORF7a5L5FCttTtt44P.1.140.000191
ORF7a5L5delCTT---44P.1.160.001496
ORF7a5L5CCTtTGt33All0.000001
ORF7a5L5GCTtGGt23All0
ORF7a5L5GCTTGGG13All0
ORF7a5L5LctTctG33AY.1010.001471
ORF7a5L5LctTctA23AY.1020.000053
ORF7a5L5LctTctG13AY.1020.000027
ORF7a5L5del1Ctt-tt33AY.1100.000338
ORF7a5L5FCttTtt33AY.16.10.00141
ORF7a5L5RcTtcGt33AY.260.000085
ORF7a5L5LctTctC33AY.270.000194
ORF7a5L5del1Ctt-tt33AY.290.000047
ORF7a5L5FCttTtt33AY.370.000948
ORF7a5L5LctTctC23AY.390.000049
ORF7a5L5LctTctG13AY.390.000025
ORF7a5L5ICttAtt33AY.430.000013
ORF7a5L5PcTtcCt23AY.470.000062
ORF7a5L5PcTTcCG13AY.470.000031
ORF7a5L5ICttAtt33AY.7.20.001678
ORF7a5L5LctTctG33AY.940.001328
ORF7a5L5PcTtcCt23AY.99.20.000184
ORF7a5L5PcTTcCG13AY.99.20.000092
ORF7a5L5HcTtcAt33B.1.10.000054
ORF7a5L5FCttTtt33B.1.1.10.00098
ORF7a5L5LctTctC33B.1.1.1890.004539
ORF7a5L5FCttTtt33B.1.1.3050.011583
ORF7a5L5FCttTtt33B.1.1.4120.022901
ORF7a5L5ICttAtt33B.1.1.4290.013825
ORF7a5L5del2cTTc--33B.1.1.70.000003
ORF7a5L5ICttAtt33B.1.1770.00004
ORF7a5L5FCttTtt33B.1.177.570.000843
ORF7a5L5FCttTtt33B.1.177.70.000495
ORF7a5L5del2cTTc--33B.1.20.000026
ORF7a5L5delCTT---33B.1.2340.000396
ORF7a5L5FCttTtt33B.1.2340.000396
ORF7a5L5HcTtcAt33B.1.2400.000647
ORF7a5L5LctTctC33B.1.258.140.002941
ORF7a5L5FCttTtt33B.1.36.290.001552
ORF7a5L5VCttGtt33B.1.4270.000151
ORF7a5L5ICttAtt33B.1.4290.000071
ORF7a5L5del2CTT--N33B.1.438.10.000322
ORF7a5L5ICttAtt33B.1.438.10.000322
ORF7a5L5FCttTtt33B.1.617.10.000387
ORF7a5L5RcTtcGt33B.1.617.20.000011
ORF7a5L5LctTctC33B.1.6210.000266
ORF7a5L5PcTtcCt33B.1.6210.000266
ORF7a5L5delCTT---33B.1.6260.017143
ORF7a5L5RcTtcGt220.111111
ORF7a5L5GCTtGGt220.111111
ORF7a5L5ICttAtt220.111111
ORF7a5L5VCttGtt220.111111
ORF7a5L5SCTtAGt220.111111
ORF7a5L5NCTtAAt220.111111
ORF7a5L5CCTtTGt220.111111
ORF7a5L5DCTtGAt220.111111
ORF7a5L5delCTT---22A.280.005291
ORF7a5L5NCTtAAt22All0
ORF7a5L5DCTtGAt22All0
ORF7a5L5delCTT---22AY.1000.000092
ORF7a5L5PcTTcCG12AY.1030.000006
ORF7a5L5PcTtcCt12AY.1030.000006
ORF7a5L5HcTtcAt22AY.116.10.000623
ORF7a5L5PcTtcCt22AY.1170.000169
ORF7a5L5VCttGtt22AY.1190.000071
ORF7a5L5delCTT---22AY.1190.000071
ORF7a5L5ICttAtt22AY.120.000632
ORF7a5L5delCTT---22AY.200.000078
ORF7a5L5delCTT---22AY.29.10.000441
ORF7a5L5LctTctC22AY.30.00002
ORF7a5L5delCTT---22AY.3.10.000171
ORF7a5L5delCTT---22AY.330.000134
ORF7a5L5LctTctG22AY.39.10.000079
ORF7a5L5RcTtcGt22AY.40.000003
ORF7a5L5del2cTTc--22AY.40.000003
ORF7a5L5delCTT---22AY.420.00008
ORF7a5L5del1Ctt-tt22AY.440.000012
ORF7a5L5PcTtcCt22AY.440.000012
ORF7a5L5SCTtTCt22AY.440.000012
ORF7a5L5PcTtcCt12AY.460.000104
ORF7a5L5PcTTcCG12AY.460.000104
ORF7a5L5FCttTtt22AY.540.000191
ORF7a5L5FCttTtt22AY.590.001059
ORF7a5L5FCttTtt22AY.60.000082
ORF7a5L5LctTctG22AY.620.000871
ORF7a5L5FCttTtt22AY.620.000871
ORF7a5L5LctTctG22AY.670.000929
ORF7a5L5FCttTtt22AY.740.000231
ORF7a5L5delCTT---22AY.750.000112
ORF7a5L5ICttAtt22AY.75.10.000361
ORF7a5L5LctTctA22AY.840.000875
ORF7a5L5PcTtcCt22AY.9.20.000073
ORF7a5L5VCttGtt22AY.940.000885
ORF7a5L5FCttTtt22AY.99.20.000184
ORF7a5L5ICttAtt22B.10.000018
ORF7a5L5LctTctC22B.1.10.000036
ORF7a5L5RcTtcGt22B.1.10.000036
ORF7a5L5FCttTtt22B.1.1.1410.004024
ORF7a5L5LctTctG22B.1.1.2070.002364
ORF7a5L5FCttTtt22B.1.1.2140.000111
ORF7a5L5HcTtcAt22B.1.1.2220.000408
ORF7a5L5FCttTtt22B.1.1.2840.000215
ORF7a5L5FCttTtt22B.1.1.3170.000823
ORF7a5L5FCttTtt22B.1.1.390.001019
ORF7a5L5FCttTtt22B.1.1.4320.002532
ORF7a5L5HcTTcAC12B.1.1.70.000001
ORF7a5L5HcTtcAt12B.1.1.70.000001
ORF7a5L5FCttTtt22B.1.110.30.001437
ORF7a5L5delCTT---22B.1.1600.000062
ORF7a5L5FCttTtt22B.1.160.140.004237
ORF7a5L5FCttTtt22B.1.160.230.009662
ORF7a5L5RcTtcGt22B.1.177.570.000562
ORF7a5L5delCTT---22B.1.177.860.000367
ORF7a5L5FCttTtt22B.1.177.860.000367
ORF7a5L5FCttTtt22B.1.177.90.002663
ORF7a5L5ICttAtt22B.1.20.000018
ORF7a5L5RcTtcGt22B.1.20.000018
ORF7a5L5del1cTtc-t12B.1.20.000009
ORF7a5L5del1Ctt-tt12B.1.20.000009
ORF7a5L5ICttAtt22B.1.2180.010309
ORF7a5L5PcTtcCt22B.1.2210.000142
ORF7a5L5PcTtcCt22B.1.2430.000139
ORF7a5L5delCTT---22B.1.258.110.000793
ORF7a5L5LctTctG22B.1.258.30.00335
ORF7a5L5FCttTtt22B.1.3110.000549
ORF7a5L5delCTT---22B.1.3510.000059
ORF7a5L5LctTctC22B.1.3510.000059
ORF7a5L5FCttTtt22B.1.360.000292
ORF7a5L5delCTT---22B.1.360.000292
ORF7a5L5FCttTtt22B.1.36.180.00084
ORF7a5L5RcTtcGt22B.1.36.380.003284
ORF7a5L5LctTctC12B.1.4270.00005
ORF7a5L5LctTctG12B.1.4270.00005
ORF7a5L5FCttTtt22B.1.5160.003914
ORF7a5L5FCttTtt22B.1.5890.015152
ORF7a5L5delCTT---22B.1.5960.000174
ORF7a5L5VCttGtt22B.1.5960.000174
ORF7a5L5LctTctC22B.1.617.10.000258
ORF7a5L5PcTtcCt22B.1.617.10.000258
ORF7a5L5HcTtcAt22B.1.617.20.000008
ORF7a5L5del2cTTc--22B.1.617.20.000008
ORF7a5L5delCTT---22B.1.6210.000177
ORF7a5L5FCttTtt22B.1.6210.000177
ORF7a5L5delCTT---22B.1.6370.000146
ORF7a5L5LctTctC22B.150.035088
ORF7a5L5FCttTtt22C.36.30.001134
ORF7a5L5PcTtcCt12P.1.120.000484
ORF7a5L5LctTctC12P.1.120.000484
ORF7a5L5LctTctG12P.1.120.000484
ORF7a5L5PcTTcCG12P.1.120.000484
ORF7a5L5LctTctC22P.1.140.000096
ORF7a5L5VCttGtt22P.1.170.000324
ORF7a5L5TCTTACC12P.1.20.001156
ORF7a5L5LctTctG12P.1.20.001156
ORF7a5L5PcTTcCC12P.1.20.001156
ORF7a5L5LctTctC12P.1.20.001156
ORF7a5L5TCTTACG12P.1.20.001156
ORF7a5L5PcTTcCG12P.1.20.001156
ORF7a5L5PcTtcCt12P.70.004367
ORF7a5L5PcTTcCG12P.70.004367
ORF7a5L5delCTT---22Q.10.000253
ORF7a5L5FCttTtt22Q.80.00033
ORF7a5L5delCTT---11A0.000387
ORF7a5L5LctTctC11A.10.000282
ORF7a5L5FCttTtt11A.2.50.000499
ORF7a5L5FCttTtt11A.23.10.000704
ORF7a5L5PcTtcCt11AD.20.000219
ORF7a5L5MCtTAtG11All0
ORF7a5L5KCTTAAG11All0
ORF7a5L5FCttTtt11AU.10.001266
ORF7a5L5FCttTtt11AY.100.00053
ORF7a5L5TCTTACG11AY.1010.00049
ORF7a5L5ICtTAtC11AY.1010.00049
ORF7a5L5ICttAtt11AY.1020.000027
ORF7a5L5del1cTtc-t11AY.1050.000643
ORF7a5L5PcTtcCt11AY.1050.000643
ORF7a5L5delCTT---11AY.1070.000466
ORF7a5L5LctTctC11AY.1070.000466
ORF7a5L5delCTT---11AY.1080.001103
ORF7a5L5delCTT---11AY.1090.00074
ORF7a5L5FCttTtt11AY.1100.000113
ORF7a5L5PcTtcCt11AY.1110.000183
ORF7a5L5LctTctA11AY.1110.000183
ORF7a5L5del1cTtc-t11AY.1130.000142
ORF7a5L5FCttTtt11AY.1130.000142
ORF7a5L5LctTctC11AY.1140.000231
ORF7a5L5LctTctC11AY.1150.005208
ORF7a5L5FCttTtt11AY.1160.000287
ORF7a5L5FCttTtt11AY.1170.000085
ORF7a5L5LctTctC11AY.1170.000085
ORF7a5L5ICttAtt11AY.1170.000085
ORF7a5L5del1CtT-tC11AY.1170.000085
ORF7a5L5ICttAtt11AY.1190.000035
ORF7a5L5PcTtcCt11AY.1190.000035
ORF7a5L5FCttTtt11AY.120.000316
ORF7a5L5delCTT---11AY.1200.000037
ORF7a5L5FCttTtt11AY.1200.000037
ORF7a5L5del1cTtc-t11AY.1200.000037
ORF7a5L5HcTtcAt11AY.120.10.000321
ORF7a5L5delCTT---11AY.120.10.000321
ORF7a5L5VCttGtt11AY.120.20.001285
ORF7a5L5LctTctC11AY.120.2.10.000498
ORF7a5L5del1cTtc-t11AY.1210.000135
ORF7a5L5delCTT---11AY.1210.000135
ORF7a5L5FCttTtt11AY.130.000161
ORF7a5L5FCttTtt11AY.220.002092
ORF7a5L5LctTctC11AY.230.00007
ORF7a5L5del1cTtc-t11AY.230.00007
ORF7a5L5FCttTtt11AY.23.10.000417
ORF7a5L5PcTtcCt11AY.23.10.000417
ORF7a5L5VCttGtt11AY.250.000006
ORF7a5L5LctTctG11AY.260.000028
ORF7a5L5FCttTtt11AY.270.000065
ORF7a5L5PcTtcCt11AY.270.000065
ORF7a5L5GCTTGGG11AY.290.000016
ORF7a5L5del2cTTc--11AY.290.000016
ORF7a5L5ICttAtt11AY.290.000016
ORF7a5L5PcTtcCt11AY.290.000016
ORF7a5L5ICttAtt11AY.30.00001
ORF7a5L5delCTT---11AY.320.000532
ORF7a5L5FCttTtt11AY.320.000532
ORF7a5L5PcTtcCt11AY.330.000067
ORF7a5L5HcTtcAt11AY.330.000067
ORF7a5L5ICttAtt11AY.330.000067
ORF7a5L5FCttTtt11AY.340.000097
ORF7a5L5LctTctC11AY.340.000097
ORF7a5L5delCTT---11AY.340.000097
ORF7a5L5VCttGtt11AY.380.000499
ORF7a5L5del1cTtc-t11AY.390.000025
ORF7a5L5del1ctTct-11AY.40.000002
ORF7a5L5HcTtcAt11AY.40.000002
ORF7a5L5delCTT---11AY.4.20.000022
ORF7a5L5LctTctC11AY.4.20.000022
ORF7a5L5RcTtcGt11AY.4.20.000022
ORF7a5L5FCttTtt11AY.4.20.000022
ORF7a5L5PcTtcCt11AY.4.50.000107
ORF7a5L5VCttGtt11AY.420.00004
ORF7a5L5delCTT---11AY.450.000122
ORF7a5L5del1cTtc-t11AY.450.000122
ORF7a5L5FCttTtt11AY.460.000104
ORF7a5L5PcTTcCG11AY.46.10.001027
ORF7a5L5del1cTtc-t11AY.46.40.000165
ORF7a5L5LctTctC11AY.470.000031
ORF7a5L5ICttAtt11AY.5.30.000337
ORF7a5L5delCTT---11AY.540.000095
ORF7a5L5LctTctA11AY.580.000907
ORF7a5L5HcTtcAt11AY.60.000041
ORF7a5L5VCttGtt11AY.60.000041
ORF7a5L5ICttAtt11AY.60.000041
ORF7a5L5ICttAtt11AY.610.000105
ORF7a5L5delCTT---11AY.660.00107
ORF7a5L5FCttTtt11AY.680.000274
ORF7a5L5FCttTtt11AY.690.000187
ORF7a5L5FCttTtt11AY.700.000209
ORF7a5L5PcTtcCt11AY.730.000665
ORF7a5L5VCttGtt11AY.740.000116
ORF7a5L5LctTctC11AY.75.10.00018
ORF7a5L5FCttTtt11AY.75.10.00018
ORF7a5L5delCTT---11AY.790.001211
ORF7a5L5PcTTcCG11AY.790.001211
ORF7a5L5HcTtcAt11AY.790.001211
ORF7a5L5delCTT---11AY.840.000437
ORF7a5L5FCttTtt11AY.850.000427
ORF7a5L5PcTtcCt11AY.90.000068
ORF7a5L5delCTT---11AY.90.000068
ORF7a5L5PcTtcCt11AY.9.10.000084
ORF7a5L5del1cTtc-t11AY.9.20.000037
ORF7a5L5delCTT---11AY.9.20.000037
ORF7a5L5delCTT---11AY.940.000443
ORF7a5L5LctTctC11AY.980.000079
ORF7a5L5delCTT---11AY.990.001049
ORF7a5L5FCttTtt11AY.990.001049
ORF7a5L5ICttAtt11B0.000128
ORF7a5L5PcTtcCt11B0.000128
ORF7a5L5del2cTTc--11B.10.000009
ORF7a5L5HcTtcAt11B.10.000009
ORF7a5L5del1Ctt-tt11B.10.000009
ORF7a5L5RcTtcGt11B.10.000009
ORF7a5L5ICttAtt11B.1.10.000018
ORF7a5L5KCTTAAG11B.1.10.000018
ORF7a5L5LctTctC11B.1.1.10.000327
ORF7a5L5FCttTtt11B.1.1.1350.004695
ORF7a5L5FCttTtt11B.1.1.1980.001468
ORF7a5L5delCTT---11B.1.1.2070.001182
ORF7a5L5LctTctC11B.1.1.2160.00089
ORF7a5L5delCTT---11B.1.1.2220.000204
ORF7a5L5PcTtcCt11B.1.1.2220.000204
ORF7a5L5FCttTtt11B.1.1.250.000569
ORF7a5L5FCttTtt11B.1.1.2560.013699
ORF7a5L5delCTT---11B.1.1.2580.003257
ORF7a5L5FCttTtt11B.1.1.2730.006757
ORF7a5L5FCttTtt11B.1.1.280.000311
ORF7a5L5PcTtcCt11B.1.1.280.000311
ORF7a5L5PcTtcCt11B.1.1.2840.000107
ORF7a5L5FCttTtt11B.1.1.2940.001266
ORF7a5L5FCttTtt11B.1.1.3110.000358
ORF7a5L5LctTctA11B.1.1.330.000421
ORF7a5L5FCttTtt11B.1.1.3620.005618
ORF7a5L5FCttTtt11B.1.1.370.000193
ORF7a5L5PcTtcCt11B.1.1.370.000193
ORF7a5L5FCttTtt11B.1.1.3720.000689
ORF7a5L5LctTctC11B.1.1.3780.007299
ORF7a5L5FCttTtt11B.1.1.410.006329
ORF7a5L5RcTtcGt11B.1.1.4850.016667
ORF7a5L5FCttTtt11B.1.1.500.000679
ORF7a5L5LctTctC11B.1.1.5190.00004
ORF7a5L5delCTT---11B.1.1.5190.00004
ORF7a5L5PcTtcCt11B.1.1.5190.00004
ORF7a5L5LctTctG11B.1.1.5210.005348
ORF7a5L5SCTtTCt11B.1.1.70.000001
ORF7a5L5CCTtTGt11B.1.1.70.000001
ORF7a5L5FCttTtt11B.1.1030.019231
ORF7a5L5delCTT---11B.1.1150.021739
ORF7a5L5FCttTtt11B.1.1400.018868
ORF7a5L5HcTtcAt11B.1.1470.000756
ORF7a5L5LctTctC11B.1.1600.000031
ORF7a5L5FCttTtt11B.1.160.100.008065
ORF7a5L5FCttTtt11B.1.160.300.002976
ORF7a5L5delCTT---11B.1.1610.017241
ORF7a5L5VCttGtt11B.1.1770.000013
ORF7a5L5HcTtcAt11B.1.1770.000013
ORF7a5L5FCttTtt11B.1.177.100.000878
ORF7a5L5del2cTTc--11B.1.177.120.000152
ORF7a5L5PcTtcCt11B.1.177.420.000894
ORF7a5L5PcTtcCt11B.1.177.600.000218
ORF7a5L5delCTT---11B.1.177.630.002703
ORF7a5L5FCttTtt11B.1.177.730.000566
ORF7a5L5FCttTtt11B.1.177.750.001041
ORF7a5L5delCTT---11B.1.177.810.000189
ORF7a5L5HcTtcAt11B.1.20.000009
ORF7a5L5FCttTtt11B.1.214.20.0006
ORF7a5L5LctTctA11B.1.214.20.0006
ORF7a5L5delCTT---11B.1.2210.000071
ORF7a5L5PcTtcCt11B.1.2230.002778
ORF7a5L5LctTctC11B.1.2340.000132
ORF7a5L5del2cTTc--11B.1.2340.000132
ORF7a5L5HcTtcAt11B.1.2340.000132
ORF7a5L5ICttAtt11B.1.2400.000216
ORF7a5L5delCTT---11B.1.2400.000216
ORF7a5L5ICttAtt11B.1.2430.00007
ORF7a5L5FCttTtt11B.1.2560.017241
ORF7a5L5ICttAtt11B.1.2580.000067
ORF7a5L5ICttAtt11B.1.258.170.000104
ORF7a5L5ICttAtt11B.1.258.40.003448
ORF7a5L5HcTtcAt11B.1.258.70.001912
ORF7a5L5ICttAtt11B.1.3010.005917
ORF7a5L5VCttGtt11B.1.3110.000275
ORF7a5L5FCttTtt11B.1.3460.001311
ORF7a5L5PcTtcCt11B.1.3490.000715
ORF7a5L5PcTtcCt11B.1.3510.00003
ORF7a5L5del1ctTct-11B.1.3510.00003
ORF7a5L5FCttTtt11B.1.36.170.000494
ORF7a5L5LctTctC11B.1.36.290.000517
ORF7a5L5del1cTtc-t11B.1.3620.001541
ORF7a5L5FCttTtt11B.1.3750.00082
ORF7a5L5VCttGtt11B.1.3960.000706
ORF7a5L5FCttTtt11B.1.3980.002976
ORF7a5L5ICttAtt11B.1.3980.002976
ORF7a5L5LctTctC11B.1.4040.001302
ORF7a5L5FCttTtt11B.1.4070.035714
ORF7a5L5FCttTtt11B.1.4130.004255
ORF7a5L5delCTT---11B.1.4270.00005
ORF7a5L5PcTtcCt11B.1.4270.00005
ORF7a5L5PcTtcCt11B.1.4290.000024
ORF7a5L5PcTtcCt11B.1.438.10.000107
ORF7a5L5FCttTtt11B.1.438.10.000107
ORF7a5L5LctTctG11B.1.4620.007246
ORF7a5L5FCttTtt11B.1.466.20.000391
ORF7a5L5delCTT---11B.1.466.20.000391
ORF7a5L5delCTT---11B.1.4680.005714
ORF7a5L5PcTtcCt11B.1.4690.00361
ORF7a5L5delCTT---11B.1.4700.001404
ORF7a5L5FCttTtt11B.1.4700.001404
ORF7a5L5FCttTtt11B.1.5090.000866
ORF7a5L5FCttTtt11B.1.5170.000427
ORF7a5L5delCTT---11B.1.5250.000113
ORF7a5L5ICttAtt11B.1.5260.000024
ORF7a5L5HcTtcAt11B.1.5260.000024
ORF7a5L5FCttTtt11B.1.5400.009709
ORF7a5L5PcTtcCt11B.1.5680.001111
ORF7a5L5del1cTtc-t11B.1.5740.002151
ORF7a5L5RcTTcGA11B.1.5760.000907
ORF7a5L5ICttAtt11B.1.5760.000907
ORF7a5L5LctTctC11B.1.5820.000491
ORF7a5L5FCttTtt11B.1.5820.000491
ORF7a5L5LctTctC11B.1.5950.000261
ORF7a5L5PcTtcCt11B.1.5960.000087
ORF7a5L5ICttAtt11B.1.5960.000087
ORF7a5L5del1cTtc-t11B.1.5960.000087
ORF7a5L5del1cTtc-t11B.1.6060.006024
ORF7a5L5delCTT---11B.1.617.10.000129
ORF7a5L5delCTT---11B.1.617.30.002985
ORF7a5L5delCTT---11B.1.6200.000946
ORF7a5L5VCttGtt11B.1.6210.000089
ORF7a5L5delCTT---11B.1.6300.005236
ORF7a5L5FCttTtt11B.1.6340.003425
ORF7a5L5VCttGtt11B.1.6360.006711
ORF7a5L5FCttTtt11B.30.000831
ORF7a5L5LctTctC11B.510.047619
ORF7a5L5VCttGtt11C.140.004329
ORF7a5L5HcTtcAt11C.160.00106
ORF7a5L5FCttTtt11C.160.00106
ORF7a5L5LctTctA11C.180.002591
ORF7a5L5FCttTtt11C.230.005814
ORF7a5L5delCTT---11C.36.30.000567
ORF7a5L5del1Ctt-tt11C.370.000116
ORF7a5L5LctTctC11D.20.000075
ORF7a5L5PcTtcCt11D.20.000075
ORF7a5L5FCttTtt11N.60.007092
ORF7a5L5ICttAtt11P.10.000016
ORF7a5L5HcTtcAt11P.10.000016
ORF7a5L5VCttGtt11P.10.000016
ORF7a5L5del2cTTc--11P.10.000016
ORF7a5L5TCTTACG11P.10.000016
ORF7a5L5RcTtcGt11P.10.000016
ORF7a5L5FCttTtt11P.1.10.000318
ORF7a5L5FCttTtt11P.1.150.000232
ORF7a5L5TCTTACG11P.1.150.000232
ORF7a5L5RcTtcGt11P.1.170.000162
ORF7a5L5FCttTtt11P.1.170.000162
ORF7a5L5MCtTAtG11P.1.20.001156
ORF7a5L5ICtTAtC11P.1.20.001156
ORF7a5L5PcTtcCt11P.1.80.004785
ORF7a5L5LctTctG11P.20.000187
ORF7a5L5delCTT---11P.20.000187
ORF7a5L5FCttTtt11P.50.013699
ORF7a5L5LctTctG11P.70.004367
ORF7a5L5delCTT---11Q.50.016949
ORF7a5L5FCttTtt11Q.50.016949
ORF7a5L5RcTtcGt11Q.80.000165
ORF7a5L5LctTctC11Q.80.000165
ORF7a5L5PcTtcCt11U.30.003861
ORF7a5L5del2cTTc--11W.40.001351