CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 49 & Codon = Ata

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a49L49InonsynCtaAta3203080.962527538-27540

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a49L49ICtaAta308320All0.000059
ORF7a49L49ICtaAta256256AY.40.000398
ORF7a49L49ICtaAta1212B.1.1.3690.005355
ORF7a49L49ICtaAta69AY.250.000036
ORF7a49L49ICtaAta44AY.520.003257
ORF7a49L49ICtaAta33AY.1030.000019
ORF7a49L49ICtaAta33B.1.617.20.000011
ORF7a49L49ICtaAta22AY.260.000057
ORF7a49L49ICtaAta22AY.440.000012
ORF7a49L49ICtaAta22B.1.1.70.000002
ORF7a49L49ICtaAta22B.1.20.000018
ORF7a49L49ICtaAta11A.290.005319
ORF7a49L49ICtaAta11AY.1050.000643
ORF7a49L49ICtaAta11AY.30.00001
ORF7a49L49ICtaAta11AY.4.20.000022
ORF7a49L49ICtaAta11AY.430.000004
ORF7a49L49ICtaAta11AY.470.000031
ORF7a49L49ICtaAta11AY.570.000656
ORF7a49L49ICtaAta11AY.70.000196
ORF7a49L49ICtaAta11AY.750.000056
ORF7a49L49ICtaAta11AY.90.000068
ORF7a49L49ICtaAta11B.1.1.5190.00004
ORF7a49L49ICtaAta11B.1.177.210.000076
ORF7a49L49ICtaAta11B.1.2580.000067
ORF7a49L49ICtaAta11B.1.258.170.000104
ORF7a49L49ICtaAta11B.1.4270.00005
ORF7a49L49ICtaAta11B.1.6370.000073