CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF7a | 45 | P45L | nonsyn | cCa | cTa | 85277 | 70702 | 0.829086 | 27526-27528 | |
ORF7a | 45 | P45L | nonsyn | CCa | TTa | 85277 | 14535 | 0.170445 | 27526-27528 | |
ORF7a | 45 | P45L | nonsyn | cCA | cTT | 85277 | 35 | 0.000410427 | 27526-27528 | |
ORF7a | 45 | P45L | nonsyn | cCA | cTG | 85277 | 3 | 0.0000351795 | 27526-27528 | |
ORF7a | 45 | P45L | nonsyn | cCA | cTC | 85277 | 2 | 0.000023453 | 27526-27528 | |
ORF7a | 45 | P45S | nonsyn | Cca | Tca | 3288 | 3263 | 0.992397 | 27526-27528 | |
ORF7a | 45 | P45S | nonsyn | CcA | TcT | 3288 | 22 | 0.006691 | 27526-27528 | |
ORF7a | 45 | P45S | nonsyn | CcA | TcC | 3288 | 2 | 0.000608273 | 27526-27528 | |
ORF7a | 45 | P45S | nonsyn | CCA | AGT | 3288 | 1 | 0.000304136 | 27526-27528 | |
ORF7a | 45 | P45del | del | CCA | --- | 3002 | 3002 | 1 | 27526-27528 | |
ORF7a | 45 | P45R | nonsyn | cCa | cGa | 1016 | 1012 | 0.996063 | 27526-27528 | |
ORF7a | 45 | P45R | nonsyn | cCA | cGT | 1016 | 2 | 0.0019685 | 27526-27528 | |
ORF7a | 45 | P45R | nonsyn | CCa | AGa | 1016 | 1 | 0.000984252 | 27526-27528 | |
ORF7a | 45 | P45R | nonsyn | cCA | cGG | 1016 | 1 | 0.000984252 | 27526-27528 | |
ORF7a | 45 | P45P | syn | ccA | ccT | 581 | 242 | 0.416523 | 27526-27528 | |
ORF7a | 45 | P45P | syn | ccA | ccC | 581 | 181 | 0.311532 | 27526-27528 | |
ORF7a | 45 | P45P | syn | ccA | ccG | 581 | 158 | 0.271945 | 27526-27528 | |
ORF7a | 45 | P45del2 | del | CCa | --a | 181 | 117 | 0.646409 | 27526-27528 | |
ORF7a | 45 | P45del2 | del | cCA | c-- | 181 | 63 | 0.348066 | 27526-27528 | |
ORF7a | 45 | P45del2 | del | CCA | T-- | 181 | 1 | 0.00552486 | 27526-27528 | |
ORF7a | 45 | P45Q | nonsyn | cCa | cAa | 127 | 127 | 1 | 27526-27528 | |
ORF7a | 45 | P45T | nonsyn | Cca | Aca | 82 | 72 | 0.878049 | 27526-27528 | |
ORF7a | 45 | P45T | nonsyn | CcA | AcT | 82 | 10 | 0.121951 | 27526-27528 | |
ORF7a | 45 | P45del1 | del | ccA | cc- | 65 | 59 | 0.907692 | 27526-27528 | |
ORF7a | 45 | P45del1 | del | CcA | Ac- | 65 | 2 | 0.0307692 | 27526-27528 | |
ORF7a | 45 | P45del1 | del | CCA | TT- | 65 | 2 | 0.0307692 | 27526-27528 | |
ORF7a | 45 | P45del1 | del | Cca | -ca | 65 | 1 | 0.0153846 | 27526-27528 | |
ORF7a | 45 | P45del1 | del | CcA | -cN | 65 | 1 | 0.0153846 | 27526-27528 | |
ORF7a | 45 | P45F | nonsyn | CCA | TTT | 47 | 42 | 0.893617 | 27526-27528 | |
ORF7a | 45 | P45F | nonsyn | CCA | TTC | 47 | 5 | 0.106383 | 27526-27528 | |
ORF7a | 45 | P45A | nonsyn | Cca | Gca | 34 | 23 | 0.676471 | 27526-27528 | |
ORF7a | 45 | P45A | nonsyn | CcA | GcT | 34 | 10 | 0.294118 | 27526-27528 | |
ORF7a | 45 | P45A | nonsyn | CcA | GcC | 34 | 1 | 0.0294118 | 27526-27528 | |
ORF7a | 45 | P45K | nonsyn | CCa | AAa | 26 | 26 | 1 | 27526-27528 | |
ORF7a | 45 | P45V | nonsyn | CCA | GTT | 25 | 15 | 0.6 | 27526-27528 | |
ORF7a | 45 | P45V | nonsyn | CCa | GTa | 25 | 7 | 0.28 | 27526-27528 | |
ORF7a | 45 | P45V | nonsyn | CCA | GTC | 25 | 3 | 0.12 | 27526-27528 | |
ORF7a | 45 | P45I | nonsyn | CCA | ATT | 22 | 13 | 0.590909 | 27526-27528 | |
ORF7a | 45 | P45I | nonsyn | CCa | ATa | 22 | 8 | 0.363636 | 27526-27528 | |
ORF7a | 45 | P45I | nonsyn | CCA | ATC | 22 | 1 | 0.0454545 | 27526-27528 | |
ORF7a | 45 | P45X | nonsyn | CCa | TAa | 18 | 17 | 0.944444 | 27526-27528 | |
ORF7a | 45 | P45D | nonsyn | CCA | GAT | 18 | 16 | 0.888889 | 27526-27528 | |
ORF7a | 45 | P45Y | nonsyn | CCA | TAT | 18 | 15 | 0.833333 | 27526-27528 | |
ORF7a | 45 | P45Y | nonsyn | CCA | TAC | 18 | 3 | 0.166667 | 27526-27528 | |
ORF7a | 45 | P45D | nonsyn | CCA | GAC | 18 | 2 | 0.111111 | 27526-27528 | |
ORF7a | 45 | P45X | nonsyn | CCa | TGa | 18 | 1 | 0.0555556 | 27526-27528 | |
ORF7a | 45 | P45H | nonsyn | cCA | cAT | 11 | 9 | 0.818182 | 27526-27528 | |
ORF7a | 45 | P45H | nonsyn | cCA | cAC | 11 | 2 | 0.181818 | 27526-27528 | |
ORF7a | 45 | P45N | nonsyn | CCA | AAT | 9 | 7 | 0.777778 | 27526-27528 | |
ORF7a | 45 | P45N | nonsyn | CCA | AAC | 9 | 2 | 0.222222 | 27526-27528 | |
ORF7a | 45 | P45E | nonsyn | CCa | GAa | 6 | 5 | 0.833333 | 27526-27528 | |
ORF7a | 45 | P45E | nonsyn | CCA | GAG | 6 | 1 | 0.166667 | 27526-27528 | |
ORF7a | 45 | P45C | nonsyn | CCA | TGT | 3 | 3 | 1 | 27526-27528 | |
ORF7a | 45 | P45G | nonsyn | CCa | GGa | 2 | 1 | 0.5 | 27526-27528 | |
ORF7a | 45 | P45G | nonsyn | CCA | GGT | 2 | 1 | 0.5 | 27526-27528 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF7a | 45 | P45L | cCa | cTa | 70702 | 85277 | All | 0.013523 |
ORF7a | 45 | P45L | CCa | TTa | 14535 | 85277 | All | 0.00278 |
ORF7a | 45 | P45L | cCA | cTT | 35 | 85277 | All | 0.000007 |
ORF7a | 45 | P45L | cCA | cTG | 3 | 85277 | All | 0.000001 |
ORF7a | 45 | P45L | cCA | cTC | 2 | 85277 | All | 0 |
ORF7a | 45 | P45L | cCa | cTa | 37538 | 45921 | B.1.617.2 | 0.141346 |
ORF7a | 45 | P45L | CCa | TTa | 8361 | 45921 | B.1.617.2 | 0.031483 |
ORF7a | 45 | P45L | cCA | cTT | 18 | 45921 | B.1.617.2 | 0.000068 |
ORF7a | 45 | P45L | cCA | cTG | 3 | 45921 | B.1.617.2 | 0.000011 |
ORF7a | 45 | P45L | cCA | cTC | 1 | 45921 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45L | cCa | cTa | 18153 | 22482 | AY.43 | 0.080426 |
ORF7a | 45 | P45L | CCa | TTa | 4328 | 22482 | AY.43 | 0.019175 |
ORF7a | 45 | P45L | cCA | cTT | 1 | 22482 | AY.43 | 0.000004 |
ORF7a | 45 | P45S | Cca | Tca | 3263 | 3288 | All | 0.000624 |
ORF7a | 45 | P45S | CcA | TcT | 22 | 3288 | All | 0.000004 |
ORF7a | 45 | P45S | CcA | TcC | 2 | 3288 | All | 0 |
ORF7a | 45 | P45S | CCA | AGT | 1 | 3288 | All | 0 |
ORF7a | 45 | P45del | CCA | --- | 3002 | 3002 | All | 0.000574 |
ORF7a | 45 | P45L | cCa | cTa | 1910 | 2287 | AY.44 | 0.011626 |
ORF7a | 45 | P45L | CCa | TTa | 377 | 2287 | AY.44 | 0.002295 |
ORF7a | 45 | P45L | cCa | cTa | 2083 | 2088 | B.1.1.7 | 0.001865 |
ORF7a | 45 | P45L | CCa | TTa | 5 | 2088 | B.1.1.7 | 0.000004 |
ORF7a | 45 | P45S | Cca | Tca | 2050 | 2050 | AY.4 | 0.003191 |
ORF7a | 45 | P45L | cCa | cTa | 1750 | 1779 | AY.4 | 0.002724 |
ORF7a | 45 | P45L | CCa | TTa | 29 | 1779 | AY.4 | 0.000045 |
ORF7a | 45 | P45L | cCa | cTa | 1261 | 1275 | AY.12 | 0.398546 |
ORF7a | 45 | P45L | CCa | TTa | 14 | 1275 | AY.12 | 0.004425 |
ORF7a | 45 | P45L | cCa | cTa | 525 | 1041 | AY.102 | 0.01392 |
ORF7a | 45 | P45L | CCa | TTa | 516 | 1041 | AY.102 | 0.013681 |
ORF7a | 45 | P45R | cCa | cGa | 1012 | 1016 | All | 0.000194 |
ORF7a | 45 | P45R | cCA | cGT | 2 | 1016 | All | 0 |
ORF7a | 45 | P45R | CCa | AGa | 1 | 1016 | All | 0 |
ORF7a | 45 | P45R | cCA | cGG | 1 | 1016 | All | 0 |
ORF7a | 45 | P45R | cCa | cGa | 901 | 901 | B.1.160 | 0.0281 |
ORF7a | 45 | P45L | cCa | cTa | 595 | 695 | AY.46 | 0.061928 |
ORF7a | 45 | P45L | CCa | TTa | 100 | 695 | AY.46 | 0.010408 |
ORF7a | 45 | P45L | cCa | cTa | 590 | 590 | AY.4.2 | 0.012796 |
ORF7a | 45 | P45P | ccA | ccT | 242 | 581 | All | 0.000046 |
ORF7a | 45 | P45P | ccA | ccC | 181 | 581 | All | 0.000035 |
ORF7a | 45 | P45P | ccA | ccG | 158 | 581 | All | 0.00003 |
ORF7a | 45 | P45del | CCA | --- | 498 | 498 | AY.25 | 0.002995 |
ORF7a | 45 | P45L | cCa | cTa | 473 | 495 | AY.119 | 0.016701 |
ORF7a | 45 | P45L | CCa | TTa | 22 | 495 | AY.119 | 0.000777 |
ORF7a | 45 | P45L | cCa | cTa | 470 | 487 | AY.111 | 0.086081 |
ORF7a | 45 | P45L | CCa | TTa | 17 | 487 | AY.111 | 0.003114 |
ORF7a | 45 | P45L | cCa | cTa | 378 | 444 | AY.39 | 0.009341 |
ORF7a | 45 | P45L | CCa | TTa | 66 | 444 | AY.39 | 0.001631 |
ORF7a | 45 | P45del | CCA | --- | 438 | 438 | B.1.1.7 | 0.000392 |
ORF7a | 45 | P45L | cCa | cTa | 381 | 401 | AY.103 | 0.002366 |
ORF7a | 45 | P45L | CCa | TTa | 20 | 401 | AY.103 | 0.000124 |
ORF7a | 45 | P45del | CCA | --- | 290 | 290 | B.1.617.2 | 0.001092 |
ORF7a | 45 | P45S | Cca | Tca | 279 | 279 | B.1.1.7 | 0.00025 |
ORF7a | 45 | P45del | CCA | --- | 265 | 265 | AY.4 | 0.000412 |
ORF7a | 45 | P45L | cCa | cTa | 218 | 250 | AY.25 | 0.001311 |
ORF7a | 45 | P45L | CCa | TTa | 17 | 250 | AY.25 | 0.000102 |
ORF7a | 45 | P45L | cCA | cTT | 14 | 250 | AY.25 | 0.000084 |
ORF7a | 45 | P45L | cCA | cTC | 1 | 250 | AY.25 | 0.000006 |
ORF7a | 45 | P45L | cCa | cTa | 213 | 237 | AY.116 | 0.061084 |
ORF7a | 45 | P45L | CCa | TTa | 24 | 237 | AY.116 | 0.006883 |
ORF7a | 45 | P45L | cCa | cTa | 196 | 222 | AY.34.1 | 0.099949 |
ORF7a | 45 | P45L | CCa | TTa | 26 | 222 | AY.34.1 | 0.013259 |
ORF7a | 45 | P45L | cCa | cTa | 165 | 186 | AY.117 | 0.013945 |
ORF7a | 45 | P45L | CCa | TTa | 21 | 186 | AY.117 | 0.001775 |
ORF7a | 45 | P45del | CCA | --- | 182 | 182 | B.1.177.21 | 0.013918 |
ORF7a | 45 | P45del2 | CCa | --a | 117 | 181 | All | 0.000022 |
ORF7a | 45 | P45del2 | cCA | c-- | 63 | 181 | All | 0.000012 |
ORF7a | 45 | P45del2 | CCA | T-- | 1 | 181 | All | 0 |
ORF7a | 45 | P45L | cCa | cTa | 178 | 178 | B.1.621 | 0.015756 |
ORF7a | 45 | P45L | cCa | cTa | 142 | 159 | AY.5.4 | 0.039292 |
ORF7a | 45 | P45L | CCa | TTa | 17 | 159 | AY.5.4 | 0.004704 |
ORF7a | 45 | P45L | cCa | cTa | 72 | 142 | AY.5.3 | 0.024291 |
ORF7a | 45 | P45L | CCa | TTa | 70 | 142 | AY.5.3 | 0.023617 |
ORF7a | 45 | P45S | Cca | Tca | 127 | 134 | B.1.617.2 | 0.000478 |
ORF7a | 45 | P45S | CcA | TcT | 7 | 134 | B.1.617.2 | 0.000026 |
ORF7a | 45 | P45L | cCa | cTa | 133 | 133 | AY.26 | 0.003765 |
ORF7a | 45 | P45L | cCa | cTa | 118 | 133 | AY.45 | 0.014359 |
ORF7a | 45 | P45L | CCa | TTa | 15 | 133 | AY.45 | 0.001825 |
ORF7a | 45 | P45L | cCa | cTa | 108 | 132 | AY.84 | 0.047244 |
ORF7a | 45 | P45L | CCa | TTa | 24 | 132 | AY.84 | 0.010499 |
ORF7a | 45 | P45Q | cCa | cAa | 127 | 127 | All | 0.000024 |
ORF7a | 45 | P45S | Cca | Tca | 123 | 123 | AY.43 | 0.000545 |
ORF7a | 45 | P45L | cCa | cTa | 118 | 118 | AY.46.4 | 0.019411 |
ORF7a | 45 | P45L | CCa | TTa | 92 | 108 | AY.59 | 0.048729 |
ORF7a | 45 | P45L | cCa | cTa | 16 | 108 | AY.59 | 0.008475 |
ORF7a | 45 | P45L | cCa | cTa | 103 | 103 | AY.41 | 0.030276 |
ORF7a | 45 | P45L | cCa | cTa | 90 | 103 | AY.5 | 0.001858 |
ORF7a | 45 | P45L | CCa | TTa | 13 | 103 | AY.5 | 0.000268 |
ORF7a | 45 | P45del | CCA | --- | 102 | 102 | AY.3 | 0.001015 |
ORF7a | 45 | P45del | CCA | --- | 98 | 98 | AY.103 | 0.000608 |
ORF7a | 45 | P45L | cCa | cTa | 69 | 98 | AY.63 | 0.026692 |
ORF7a | 45 | P45L | CCa | TTa | 29 | 98 | AY.63 | 0.011219 |
ORF7a | 45 | P45L | cCa | cTa | 89 | 90 | AY.46.2 | 0.056544 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 90 | AY.46.2 | 0.000635 |
ORF7a | 45 | P45L | cCa | cTa | 90 | 90 | P.1 | 0.001418 |
ORF7a | 45 | P45L | cCa | cTa | 88 | 88 | B.1.2 | 0.000775 |
ORF7a | 45 | P45L | cCa | cTa | 85 | 87 | B.1 | 0.000779 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 87 | B.1 | 0.000018 |
ORF7a | 45 | P45S | Cca | Tca | 86 | 86 | AY.3 | 0.000855 |
ORF7a | 45 | P45L | cCa | cTa | 66 | 83 | AY.23 | 0.004603 |
ORF7a | 45 | P45L | CCa | TTa | 17 | 83 | AY.23 | 0.001186 |
ORF7a | 45 | P45T | Cca | Aca | 72 | 82 | All | 0.000014 |
ORF7a | 45 | P45T | CcA | AcT | 10 | 82 | All | 0.000002 |
ORF7a | 45 | P45del | CCA | --- | 80 | 80 | AY.43 | 0.000354 |
ORF7a | 45 | P45S | Cca | Tca | 79 | 79 | AY.103 | 0.000491 |
ORF7a | 45 | P45L | cCa | cTa | 72 | 74 | AY.3 | 0.000716 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 74 | AY.3 | 0.00001 |
ORF7a | 45 | P45L | cCA | cTT | 1 | 74 | AY.3 | 0.00001 |
ORF7a | 45 | P45L | cCa | cTa | 49 | 72 | AY.32 | 0.026092 |
ORF7a | 45 | P45L | CCa | TTa | 23 | 72 | AY.32 | 0.012247 |
ORF7a | 45 | P45L | cCa | cTa | 72 | 72 | B.1.177 | 0.000948 |
ORF7a | 45 | P45L | cCa | cTa | 69 | 70 | AY.33 | 0.004608 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 70 | AY.33 | 0.000067 |
ORF7a | 45 | P45del | CCA | --- | 68 | 68 | AY.39 | 0.00168 |
ORF7a | 45 | P45del | CCA | --- | 66 | 66 | AY.44 | 0.000402 |
ORF7a | 45 | P45del1 | ccA | cc- | 59 | 65 | All | 0.000011 |
ORF7a | 45 | P45del1 | CCA | TT- | 2 | 65 | All | 0 |
ORF7a | 45 | P45del1 | CcA | Ac- | 2 | 65 | All | 0 |
ORF7a | 45 | P45del1 | CcA | -cN | 1 | 65 | All | 0 |
ORF7a | 45 | P45del1 | Cca | -ca | 1 | 65 | All | 0 |
ORF7a | 45 | P45del | CCA | --- | 63 | 63 | AY.100 | 0.002898 |
ORF7a | 45 | P45del2 | CCa | --a | 62 | 62 | AY.4 | 0.000096 |
ORF7a | 45 | P45L | cCa | cTa | 54 | 62 | AY.46.6 | 0.003899 |
ORF7a | 45 | P45L | CCa | TTa | 8 | 62 | AY.46.6 | 0.000578 |
ORF7a | 45 | P45L | CCa | TTa | 36 | 61 | AY.118 | 0.002255 |
ORF7a | 45 | P45L | cCa | cTa | 25 | 61 | AY.118 | 0.001566 |
ORF7a | 45 | P45L | cCa | cTa | 57 | 61 | AY.58 | 0.051724 |
ORF7a | 45 | P45L | CCa | TTa | 4 | 61 | AY.58 | 0.00363 |
ORF7a | 45 | P45S | Cca | Tca | 43 | 60 | AY.25 | 0.000259 |
ORF7a | 45 | P45S | CcA | TcT | 15 | 60 | AY.25 | 0.00009 |
ORF7a | 45 | P45S | CcA | TcC | 1 | 60 | AY.25 | 0.000006 |
ORF7a | 45 | P45S | CCA | AGT | 1 | 60 | AY.25 | 0.000006 |
ORF7a | 45 | P45L | CCa | TTa | 49 | 59 | AY.10 | 0.025967 |
ORF7a | 45 | P45L | cCa | cTa | 10 | 59 | AY.10 | 0.005299 |
ORF7a | 45 | P45L | cCa | cTa | 59 | 59 | B.1.1 | 0.00107 |
ORF7a | 45 | P45del | CCA | --- | 58 | 58 | AY.39.1 | 0.002298 |
ORF7a | 45 | P45del | CCA | --- | 57 | 57 | AY.29 | 0.000899 |
ORF7a | 45 | P45L | cCa | cTa | 55 | 57 | AY.98 | 0.004345 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 57 | AY.98 | 0.000158 |
ORF7a | 45 | P45L | cCa | cTa | 48 | 55 | AY.105 | 0.030868 |
ORF7a | 45 | P45L | CCa | TTa | 7 | 55 | AY.105 | 0.004502 |
ORF7a | 45 | P45L | cCa | cTa | 43 | 53 | AY.89 | 0.210784 |
ORF7a | 45 | P45L | CCa | TTa | 10 | 53 | AY.89 | 0.04902 |
ORF7a | 45 | P45L | cCa | cTa | 35 | 52 | AY.42 | 0.001408 |
ORF7a | 45 | P45L | CCa | TTa | 17 | 52 | AY.42 | 0.000684 |
ORF7a | 45 | P45L | cCa | cTa | 52 | 52 | B.1.1.28 | 0.016184 |
ORF7a | 45 | P45P | ccA | ccC | 26 | 52 | B.1.2 | 0.000229 |
ORF7a | 45 | P45P | ccA | ccG | 21 | 52 | B.1.2 | 0.000185 |
ORF7a | 45 | P45P | ccA | ccT | 5 | 52 | B.1.2 | 0.000044 |
ORF7a | 45 | P45L | cCa | cTa | 49 | 51 | AY.88 | 0.043324 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 51 | AY.88 | 0.001768 |
ORF7a | 45 | P45P | ccA | ccG | 22 | 49 | B.1.1.7 | 0.00002 |
ORF7a | 45 | P45P | ccA | ccT | 15 | 49 | B.1.1.7 | 0.000013 |
ORF7a | 45 | P45P | ccA | ccC | 12 | 49 | B.1.1.7 | 0.000011 |
ORF7a | 45 | P45F | CCA | TTT | 42 | 47 | All | 0.000008 |
ORF7a | 45 | P45F | CCA | TTC | 5 | 47 | All | 0.000001 |
ORF7a | 45 | P45L | cCa | cTa | 39 | 47 | AY.92 | 0.011204 |
ORF7a | 45 | P45L | CCa | TTa | 8 | 47 | AY.92 | 0.002298 |
ORF7a | 45 | P45L | cCa | cTa | 40 | 46 | AY.99 | 0.041973 |
ORF7a | 45 | P45L | CCa | TTa | 6 | 46 | AY.99 | 0.006296 |
ORF7a | 45 | P45L | cCa | cTa | 32 | 45 | AY.47 | 0.000995 |
ORF7a | 45 | P45L | CCa | TTa | 13 | 45 | AY.47 | 0.000404 |
ORF7a | 45 | P45L | cCa | cTa | 44 | 44 | AY.78 | 0.067797 |
ORF7a | 45 | P45L | cCa | cTa | 41 | 43 | AY.20 | 0.001593 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 43 | AY.20 | 0.000078 |
ORF7a | 45 | P45L | cCa | cTa | 35 | 42 | AY.106 | 0.011721 |
ORF7a | 45 | P45L | CCa | TTa | 7 | 42 | AY.106 | 0.002344 |
ORF7a | 45 | P45L | cCa | cTa | 35 | 42 | AY.95 | 0.026636 |
ORF7a | 45 | P45L | CCa | TTa | 7 | 42 | AY.95 | 0.005327 |
ORF7a | 45 | P45del | CCA | --- | 41 | 41 | AY.3.1 | 0.003496 |
ORF7a | 45 | P45P | ccA | ccT | 33 | 41 | B.1.429 | 0.000776 |
ORF7a | 45 | P45P | ccA | ccC | 7 | 41 | B.1.429 | 0.000165 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 41 | B.1.429 | 0.000024 |
ORF7a | 45 | P45S | Cca | Tca | 39 | 39 | AY.44 | 0.000237 |
ORF7a | 45 | P45T | Cca | Aca | 38 | 38 | B.1.1.7 | 0.000034 |
ORF7a | 45 | P45del | CCA | --- | 37 | 37 | B.1.1.284 | 0.003974 |
ORF7a | 45 | P45del | CCA | --- | 37 | 37 | B.1.621 | 0.003275 |
ORF7a | 45 | P45L | cCa | cTa | 36 | 36 | AY.29 | 0.000568 |
ORF7a | 45 | P45R | cCa | cGa | 35 | 36 | B.1.617.2 | 0.000132 |
ORF7a | 45 | P45R | cCA | cGT | 1 | 36 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45A | Cca | Gca | 23 | 34 | All | 0.000004 |
ORF7a | 45 | P45A | CcA | GcT | 10 | 34 | All | 0.000002 |
ORF7a | 45 | P45A | CcA | GcC | 1 | 34 | All | 0 |
ORF7a | 45 | P45del | CCA | --- | 34 | 34 | B.1 | 0.000311 |
ORF7a | 45 | P45Q | cCa | cAa | 34 | 34 | B.1.1.7 | 0.00003 |
ORF7a | 45 | P45L | cCa | cTa | 29 | 33 | AY.19 | 0.033067 |
ORF7a | 45 | P45L | CCa | TTa | 4 | 33 | AY.19 | 0.004561 |
ORF7a | 45 | P45L | cCa | cTa | 31 | 31 | AY.108 | 0.034179 |
ORF7a | 45 | P45L | cCa | cTa | 25 | 31 | AY.113 | 0.00356 |
ORF7a | 45 | P45L | CCa | TTa | 6 | 31 | AY.113 | 0.000854 |
ORF7a | 45 | P45L | cCa | cTa | 30 | 31 | AY.120 | 0.001115 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 31 | AY.120 | 0.000037 |
ORF7a | 45 | P45R | cCa | cGa | 31 | 31 | AY.61 | 0.003248 |
ORF7a | 45 | P45del | CCA | --- | 30 | 30 | AY.102 | 0.000795 |
ORF7a | 45 | P45L | cCa | cTa | 28 | 29 | B.1.351 | 0.000832 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 29 | B.1.351 | 0.00003 |
ORF7a | 45 | P45L | cCa | cTa | 23 | 28 | AY.100 | 0.001058 |
ORF7a | 45 | P45L | CCa | TTa | 5 | 28 | AY.100 | 0.00023 |
ORF7a | 45 | P45L | cCa | cTa | 27 | 28 | AY.46.1 | 0.027721 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 28 | AY.46.1 | 0.001027 |
ORF7a | 45 | P45L | cCa | cTa | 28 | 28 | AY.56 | 0.044944 |
ORF7a | 45 | P45S | Cca | Tca | 27 | 27 | AY.39.1 | 0.00107 |
ORF7a | 45 | P45P | ccA | ccT | 27 | 27 | B.1.110.3 | 0.019397 |
ORF7a | 45 | P45L | cCa | cTa | 27 | 27 | B.1.429 | 0.000635 |
ORF7a | 45 | P45K | CCa | AAa | 26 | 26 | All | 0.000005 |
ORF7a | 45 | P45del | CCA | --- | 26 | 26 | AY.119 | 0.000918 |
ORF7a | 45 | P45P | ccA | ccG | 15 | 26 | AY.3 | 0.000149 |
ORF7a | 45 | P45P | ccA | ccT | 10 | 26 | AY.3 | 0.000099 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 26 | AY.3 | 0.00001 |
ORF7a | 45 | P45V | CCA | GTT | 15 | 25 | All | 0.000003 |
ORF7a | 45 | P45V | CCa | GTa | 7 | 25 | All | 0.000001 |
ORF7a | 45 | P45V | CCA | GTC | 3 | 25 | All | 0.000001 |
ORF7a | 45 | P45L | cCa | cTa | 25 | 25 | B.1.160 | 0.00078 |
ORF7a | 45 | P45F | CCA | TTT | 20 | 24 | AY.25 | 0.00012 |
ORF7a | 45 | P45F | CCA | TTC | 4 | 24 | AY.25 | 0.000024 |
ORF7a | 45 | P45L | cCa | cTa | 24 | 24 | AY.54 | 0.002288 |
ORF7a | 45 | P45L | cCa | cTa | 22 | 24 | AY.91 | 0.01607 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 24 | AY.91 | 0.001461 |
ORF7a | 45 | P45Q | cCa | cAa | 24 | 24 | B.1.637 | 0.001754 |
ORF7a | 45 | P45S | Cca | Tca | 23 | 23 | AY.39 | 0.000568 |
ORF7a | 45 | P45L | cCa | cTa | 23 | 23 | AY.53 | 0.006613 |
ORF7a | 45 | P45L | cCa | cTa | 23 | 23 | AY.9 | 0.001555 |
ORF7a | 45 | P45del | CCA | --- | 23 | 23 | B.1.1.214 | 0.001276 |
ORF7a | 45 | P45del1 | ccA | cc- | 23 | 23 | B.1.2 | 0.000203 |
ORF7a | 45 | P45I | CCA | ATT | 13 | 22 | All | 0.000002 |
ORF7a | 45 | P45I | CCa | ATa | 8 | 22 | All | 0.000002 |
ORF7a | 45 | P45I | CCA | ATC | 1 | 22 | All | 0 |
ORF7a | 45 | P45L | CCa | TTa | 12 | 22 | AY.14 | 0.001056 |
ORF7a | 45 | P45L | cCa | cTa | 10 | 22 | AY.14 | 0.00088 |
ORF7a | 45 | P45del2 | CCa | --a | 22 | 22 | AY.25 | 0.000132 |
ORF7a | 45 | P45P | ccA | ccT | 20 | 22 | AY.46.6 | 0.001444 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 22 | AY.46.6 | 0.000144 |
ORF7a | 45 | P45L | cCa | cTa | 17 | 21 | AY.121 | 0.0023 |
ORF7a | 45 | P45L | CCa | TTa | 4 | 21 | AY.121 | 0.000541 |
ORF7a | 45 | P45V | CCA | GTT | 12 | 21 | AY.25 | 0.000072 |
ORF7a | 45 | P45V | CCa | GTa | 6 | 21 | AY.25 | 0.000036 |
ORF7a | 45 | P45V | CCA | GTC | 3 | 21 | AY.25 | 0.000018 |
ORF7a | 45 | P45L | cCa | cTa | 20 | 21 | AY.67 | 0.009285 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 21 | AY.67 | 0.000464 |
ORF7a | 45 | P45L | cCa | cTa | 20 | 21 | AY.98.1 | 0.000969 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 21 | AY.98.1 | 0.000048 |
ORF7a | 45 | P45S | Cca | Tca | 21 | 21 | B.1.2 | 0.000185 |
ORF7a | 45 | P45L | cCa | cTa | 16 | 20 | AY.4.3 | 0.013468 |
ORF7a | 45 | P45L | CCa | TTa | 4 | 20 | AY.4.3 | 0.003367 |
ORF7a | 45 | P45S | Cca | Tca | 20 | 20 | AY.5 | 0.000413 |
ORF7a | 45 | P45S | Cca | Tca | 20 | 20 | B.1.429 | 0.000471 |
ORF7a | 45 | P45L | cCa | cTa | 16 | 19 | AY.110 | 0.001803 |
ORF7a | 45 | P45L | CCa | TTa | 3 | 19 | AY.110 | 0.000338 |
ORF7a | 45 | P45P | ccA | ccT | 13 | 19 | AY.25 | 0.000078 |
ORF7a | 45 | P45P | ccA | ccG | 3 | 19 | AY.25 | 0.000018 |
ORF7a | 45 | P45P | ccA | ccC | 3 | 19 | AY.25 | 0.000018 |
ORF7a | 45 | P45del | CCA | --- | 19 | 19 | AY.42 | 0.000764 |
ORF7a | 45 | P45P | ccA | ccT | 11 | 19 | AY.43 | 0.000049 |
ORF7a | 45 | P45P | ccA | ccC | 6 | 19 | AY.43 | 0.000027 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 19 | AY.43 | 0.000009 |
ORF7a | 45 | P45del | CCA | --- | 19 | 19 | AY.46.4 | 0.003126 |
ORF7a | 45 | P45del | CCA | --- | 19 | 19 | AY.7.2 | 0.010626 |
ORF7a | 45 | P45L | cCa | cTa | 15 | 19 | AY.77 | 0.016911 |
ORF7a | 45 | P45L | CCa | TTa | 4 | 19 | AY.77 | 0.00451 |
ORF7a | 45 | P45K | CCa | AAa | 19 | 19 | B.1.1.7 | 0.000017 |
ORF7a | 45 | P45X | CCa | TAa | 17 | 18 | All | 0.000003 |
ORF7a | 45 | P45D | CCA | GAT | 16 | 18 | All | 0.000003 |
ORF7a | 45 | P45Y | CCA | TAT | 15 | 18 | All | 0.000003 |
ORF7a | 45 | P45Y | CCA | TAC | 3 | 18 | All | 0.000001 |
ORF7a | 45 | P45D | CCA | GAC | 2 | 18 | All | 0 |
ORF7a | 45 | P45X | CCa | TGa | 1 | 18 | All | 0 |
ORF7a | 45 | P45Q | cCa | cAa | 18 | 18 | AY.25 | 0.000108 |
ORF7a | 45 | P45del | CCA | --- | 18 | 18 | AY.98.1 | 0.000872 |
ORF7a | 45 | P45L | cCa | cTa | 17 | 18 | AY.99.2 | 0.001567 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 18 | AY.99.2 | 0.000092 |
ORF7a | 45 | P45del | CCA | --- | 18 | 18 | B.1.177 | 0.000237 |
ORF7a | 45 | P45L | cCa | cTa | 18 | 18 | C.37 | 0.002089 |
ORF7a | 45 | P45L | cCa | cTa | 14 | 17 | AY.114 | 0.003235 |
ORF7a | 45 | P45L | CCa | TTa | 3 | 17 | AY.114 | 0.000693 |
ORF7a | 45 | P45L | cCa | cTa | 17 | 17 | AY.51 | 0.015455 |
ORF7a | 45 | P45L | cCa | cTa | 15 | 17 | AY.74 | 0.001735 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 17 | AY.74 | 0.000231 |
ORF7a | 45 | P45S | Cca | Tca | 17 | 17 | B.1.177 | 0.000224 |
ORF7a | 45 | P45P | ccA | ccC | 7 | 17 | B.1.617.2 | 0.000026 |
ORF7a | 45 | P45P | ccA | ccT | 7 | 17 | B.1.617.2 | 0.000026 |
ORF7a | 45 | P45P | ccA | ccG | 3 | 17 | B.1.617.2 | 0.000011 |
ORF7a | 45 | P45del2 | CCa | --a | 13 | 16 | AY.103 | 0.000081 |
ORF7a | 45 | P45del2 | cCA | c-- | 3 | 16 | AY.103 | 0.000019 |
ORF7a | 45 | P45L | cCa | cTa | 16 | 16 | AY.109 | 0.011834 |
ORF7a | 45 | P45S | Cca | Tca | 16 | 16 | AY.26 | 0.000453 |
ORF7a | 45 | P45S | Cca | Tca | 16 | 16 | AY.33 | 0.001068 |
ORF7a | 45 | P45P | ccA | ccC | 9 | 16 | B.1 | 0.000082 |
ORF7a | 45 | P45P | ccA | ccT | 6 | 16 | B.1 | 0.000055 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 16 | B.1 | 0.000009 |
ORF7a | 45 | P45L | cCa | cTa | 16 | 16 | B.1.177.57 | 0.004496 |
ORF7a | 45 | P45L | cCa | cTa | 16 | 16 | B.1.526 | 0.000376 |
ORF7a | 45 | P45Q | cCa | cAa | 15 | 15 | B.1.617.2 | 0.000056 |
ORF7a | 45 | P45L | cCa | cTa | 13 | 14 | AY.4.5 | 0.001397 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 14 | AY.4.5 | 0.000107 |
ORF7a | 45 | P45P | ccA | ccT | 10 | 14 | AY.42 | 0.000402 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 14 | AY.42 | 0.000161 |
ORF7a | 45 | P45del | CCA | --- | 14 | 14 | AY.47 | 0.000435 |
ORF7a | 45 | P45L | cCa | cTa | 14 | 14 | B.1.1.337 | 0.05036 |
ORF7a | 45 | P45L | cCa | cTa | 14 | 14 | B.1.177.77 | 0.010167 |
ORF7a | 45 | P45F | CCA | TTT | 13 | 14 | B.1.617.2 | 0.000049 |
ORF7a | 45 | P45F | CCA | TTC | 1 | 14 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45del | CCA | --- | 14 | 14 | B.1.637 | 0.001023 |
ORF7a | 45 | P45del | CCA | --- | 14 | 14 | P.1 | 0.000221 |
ORF7a | 45 | P45S | Cca | Tca | 13 | 13 | AY.102 | 0.000345 |
ORF7a | 45 | P45S | Cca | Tca | 13 | 13 | AY.29 | 0.000205 |
ORF7a | 45 | P45L | cCa | cTa | 10 | 13 | AY.48 | 0.004651 |
ORF7a | 45 | P45L | CCa | TTa | 3 | 13 | AY.48 | 0.001395 |
ORF7a | 45 | P45L | cCa | cTa | 12 | 13 | AY.64 | 0.007143 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 13 | AY.64 | 0.000595 |
ORF7a | 45 | P45L | cCa | cTa | 12 | 13 | AY.9.2 | 0.000441 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 13 | AY.9.2 | 0.000037 |
ORF7a | 45 | P45S | Cca | Tca | 13 | 13 | AY.98.1 | 0.00063 |
ORF7a | 45 | P45S | Cca | Tca | 12 | 13 | B.1 | 0.00011 |
ORF7a | 45 | P45S | CcA | TcC | 1 | 13 | B.1 | 0.000009 |
ORF7a | 45 | P45del | CCA | --- | 13 | 13 | C.37 | 0.001509 |
ORF7a | 45 | P45Y | CCA | TAT | 9 | 12 | AY.25 | 0.000054 |
ORF7a | 45 | P45A | CcA | GcT | 7 | 12 | AY.25 | 0.000042 |
ORF7a | 45 | P45A | Cca | Gca | 4 | 12 | AY.25 | 0.000024 |
ORF7a | 45 | P45Y | CCA | TAC | 3 | 12 | AY.25 | 0.000018 |
ORF7a | 45 | P45A | CcA | GcC | 1 | 12 | AY.25 | 0.000006 |
ORF7a | 45 | P45L | cCa | cTa | 12 | 12 | AY.34 | 0.001164 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 12 | AY.35 | 0.001631 |
ORF7a | 45 | P45L | CCa | TTa | 5 | 12 | AY.35 | 0.001165 |
ORF7a | 45 | P45L | CCa | TTa | 7 | 12 | AY.52 | 0.0057 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 12 | AY.52 | 0.004072 |
ORF7a | 45 | P45del2 | cCA | c-- | 11 | 12 | B.1.1.7 | 0.00001 |
ORF7a | 45 | P45del2 | CCa | --a | 1 | 12 | B.1.1.7 | 0.000001 |
ORF7a | 45 | P45del | CCA | --- | 12 | 12 | B.1.2 | 0.000106 |
ORF7a | 45 | P45L | cCa | cTa | 12 | 12 | B.1.311 | 0.003295 |
ORF7a | 45 | P45del | CCA | --- | 12 | 12 | B.1.324 | 0.019262 |
ORF7a | 45 | P45P | ccA | ccT | 12 | 12 | B.1.346 | 0.015727 |
ORF7a | 45 | P45del | CCA | --- | 12 | 12 | B.1.526 | 0.000282 |
ORF7a | 45 | P45L | cCa | cTa | 12 | 12 | Q.8 | 0.001979 |
ORF7a | 45 | P45H | cCA | cAT | 9 | 11 | All | 0.000002 |
ORF7a | 45 | P45H | cCA | cAC | 2 | 11 | All | 0 |
ORF7a | 45 | P45R | cCa | cGa | 11 | 11 | AY.102 | 0.000292 |
ORF7a | 45 | P45del | CCA | --- | 11 | 11 | AY.26 | 0.000311 |
ORF7a | 45 | P45P | ccA | ccT | 6 | 11 | AY.4 | 0.000009 |
ORF7a | 45 | P45P | ccA | ccC | 3 | 11 | AY.4 | 0.000005 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 11 | AY.4 | 0.000003 |
ORF7a | 45 | P45P | ccA | ccC | 5 | 11 | AY.44 | 0.00003 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 11 | AY.44 | 0.000024 |
ORF7a | 45 | P45P | ccA | ccT | 2 | 11 | AY.44 | 0.000012 |
ORF7a | 45 | P45L | cCa | cTa | 10 | 11 | AY.82 | 0.013569 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 11 | AY.82 | 0.001357 |
ORF7a | 45 | P45L | cCa | cTa | 11 | 11 | B.1.177.81 | 0.002083 |
ORF7a | 45 | P45del2 | CCa | --a | 11 | 11 | B.1.221 | 0.000781 |
ORF7a | 45 | P45P | ccA | ccT | 11 | 11 | C.36.3 | 0.006239 |
ORF7a | 45 | P45P | ccA | ccG | 11 | 11 | D.2 | 0.000825 |
ORF7a | 45 | P45P | ccA | ccT | 5 | 10 | AY.103 | 0.000031 |
ORF7a | 45 | P45P | ccA | ccC | 3 | 10 | AY.103 | 0.000019 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 10 | AY.103 | 0.000012 |
ORF7a | 45 | P45S | Cca | Tca | 10 | 10 | AY.116 | 0.002868 |
ORF7a | 45 | P45del | CCA | --- | 10 | 10 | AY.20 | 0.000389 |
ORF7a | 45 | P45del | CCA | --- | 10 | 10 | AY.23 | 0.000697 |
ORF7a | 45 | P45L | cCa | cTa | 10 | 10 | AY.27 | 0.000647 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 10 | AY.39.1 | 0.000277 |
ORF7a | 45 | P45L | CCa | TTa | 3 | 10 | AY.39.1 | 0.000119 |
ORF7a | 45 | P45del | CCA | --- | 10 | 10 | AY.5 | 0.000206 |
ORF7a | 45 | P45L | cCa | cTa | 10 | 10 | AY.70 | 0.002085 |
ORF7a | 45 | P45L | CCa | TTa | 6 | 10 | AY.75 | 0.000336 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 10 | AY.75 | 0.000224 |
ORF7a | 45 | P45S | Cca | Tca | 10 | 10 | AY.9 | 0.000676 |
ORF7a | 45 | P45L | cCa | cTa | 10 | 10 | B.1.1.519 | 0.000397 |
ORF7a | 45 | P45A | Cca | Gca | 10 | 10 | B.1.1.7 | 0.000009 |
ORF7a | 45 | P45T | Cca | Aca | 10 | 10 | B.1.628 | 0.003524 |
ORF7a | 45 | P45N | CCA | AAT | 7 | 9 | All | 0.000001 |
ORF7a | 45 | P45N | CCA | AAC | 2 | 9 | All | 0 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 9 | AY.11 | 0.009371 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 9 | AY.11 | 0.002677 |
ORF7a | 45 | P45H | cCA | cAT | 8 | 9 | AY.25 | 0.000048 |
ORF7a | 45 | P45H | cCA | cAC | 1 | 9 | AY.25 | 0.000006 |
ORF7a | 45 | P45del | CCA | --- | 9 | 9 | AY.34 | 0.000873 |
ORF7a | 45 | P45L | cCa | cTa | 8 | 9 | AY.87 | 0.006661 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 9 | AY.87 | 0.000833 |
ORF7a | 45 | P45L | cCa | cTa | 8 | 9 | AY.9.1 | 0.00067 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 9 | AY.9.1 | 0.000084 |
ORF7a | 45 | P45I | CCa | ATa | 5 | 9 | B.1.1.7 | 0.000004 |
ORF7a | 45 | P45I | CCA | ATT | 4 | 9 | B.1.1.7 | 0.000004 |
ORF7a | 45 | P45del | CCA | --- | 9 | 9 | L.1 | 0.017143 |
ORF7a | 45 | P45L | cCa | cTa | 9 | 9 | P.1.15 | 0.002091 |
ORF7a | 45 | P45del | CCA | --- | 9 | 9 | R.1 | 0.00081 |
ORF7a | 45 | P45D | CCA | GAT | 6 | 8 | AY.25 | 0.000036 |
ORF7a | 45 | P45D | CCA | GAC | 2 | 8 | AY.25 | 0.000012 |
ORF7a | 45 | P45L | cCa | cTa | 8 | 8 | AY.6 | 0.000329 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 8 | AY.68 | 0.001916 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 8 | AY.68 | 0.000274 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 8 | AY.69 | 0.001307 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 8 | AY.69 | 0.000187 |
ORF7a | 45 | P45S | Cca | Tca | 8 | 8 | AY.75 | 0.000448 |
ORF7a | 45 | P45del | CCA | --- | 8 | 8 | AY.75 | 0.000448 |
ORF7a | 45 | P45del1 | ccA | cc- | 8 | 8 | B.1 | 0.000073 |
ORF7a | 45 | P45del1 | ccA | cc- | 8 | 8 | B.1.1.7 | 0.000007 |
ORF7a | 45 | P45D | CCA | GAT | 8 | 8 | B.1.177.21 | 0.000612 |
ORF7a | 45 | P45del2 | cCA | c-- | 8 | 8 | B.1.2 | 0.00007 |
ORF7a | 45 | P45S | Cca | Tca | 8 | 8 | B.1.427 | 0.000404 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 7 | AY.1 | 0.00277 |
ORF7a | 45 | P45del | CCA | --- | 7 | 7 | AY.120 | 0.00026 |
ORF7a | 45 | P45X | CCa | TAa | 6 | 7 | AY.25 | 0.000036 |
ORF7a | 45 | P45X | CCa | TGa | 1 | 7 | AY.25 | 0.000006 |
ORF7a | 45 | P45T | Cca | Aca | 4 | 7 | AY.4 | 0.000006 |
ORF7a | 45 | P45T | CcA | AcT | 3 | 7 | AY.4 | 0.000005 |
ORF7a | 45 | P45S | Cca | Tca | 7 | 7 | AY.45 | 0.000852 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 7 | AY.7 | 0.001372 |
ORF7a | 45 | P45L | cCa | cTa | 6 | 7 | AY.7.1 | 0.000676 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 7 | AY.7.1 | 0.000113 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 7 | AY.99.1 | 0.01087 |
ORF7a | 45 | P45del | CCA | --- | 7 | 7 | B.1.1 | 0.000127 |
ORF7a | 45 | P45R | cCa | cGa | 7 | 7 | B.1.1.7 | 0.000006 |
ORF7a | 45 | P45del | CCA | --- | 7 | 7 | B.1.160 | 0.000218 |
ORF7a | 45 | P45del | CCA | --- | 7 | 7 | B.1.429 | 0.000165 |
ORF7a | 45 | P45del | CCA | --- | 7 | 7 | B.1.525 | 0.000792 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 7 | B.1.617.1 | 0.000516 |
ORF7a | 45 | P45P | ccA | ccT | 2 | 7 | B.1.617.1 | 0.000258 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 7 | B.1.617.1 | 0.000129 |
ORF7a | 45 | P45P | ccA | ccT | 4 | 7 | P.1 | 0.000063 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 7 | P.1 | 0.000032 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 7 | P.1 | 0.000016 |
ORF7a | 45 | P45del | CCA | --- | 7 | 7 | P.1.15 | 0.001626 |
ORF7a | 45 | P45L | cCa | cTa | 7 | 7 | R.1 | 0.00063 |
ORF7a | 45 | P45E | CCa | GAa | 5 | 6 | All | 0.000001 |
ORF7a | 45 | P45E | CCA | GAG | 1 | 6 | All | 0 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 6 | AY.102 | 0.000106 |
ORF7a | 45 | P45P | ccA | ccT | 2 | 6 | AY.102 | 0.000053 |
ORF7a | 45 | P45S | Cca | Tca | 6 | 6 | AY.111 | 0.001099 |
ORF7a | 45 | P45del | CCA | --- | 6 | 6 | AY.120.1 | 0.001926 |
ORF7a | 45 | P45I | CCA | ATT | 4 | 6 | AY.25 | 0.000024 |
ORF7a | 45 | P45I | CCa | ATa | 1 | 6 | AY.25 | 0.000006 |
ORF7a | 45 | P45I | CCA | ATC | 1 | 6 | AY.25 | 0.000006 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 6 | AY.33 | 0.000267 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 6 | AY.33 | 0.000134 |
ORF7a | 45 | P45L | CCa | TTa | 4 | 6 | AY.37 | 0.001264 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 6 | AY.37 | 0.000632 |
ORF7a | 45 | P45L | cCa | cTa | 6 | 6 | AY.40 | 0.005786 |
ORF7a | 45 | P45del2 | cCA | c-- | 6 | 6 | AY.47 | 0.000187 |
ORF7a | 45 | P45del | CCA | --- | 6 | 6 | AY.54 | 0.000572 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 6 | AY.61 | 0.000524 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 6 | AY.61 | 0.000105 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 6 | AY.85 | 0.002136 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 6 | AY.85 | 0.000427 |
ORF7a | 45 | P45L | cCa | cTa | 6 | 6 | AZ.3 | 0.009119 |
ORF7a | 45 | P45P | ccA | ccG | 3 | 6 | B.1.1 | 0.000054 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 6 | B.1.1 | 0.000036 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 6 | B.1.1 | 0.000018 |
ORF7a | 45 | P45S | Cca | Tca | 6 | 6 | B.1.1.519 | 0.000238 |
ORF7a | 45 | P45del | CCA | --- | 6 | 6 | B.1.351 | 0.000178 |
ORF7a | 45 | P45S | Cca | Tca | 6 | 6 | B.1.399 | 0.011605 |
ORF7a | 45 | P45del1 | ccA | cc- | 6 | 6 | B.1.596 | 0.000523 |
ORF7a | 45 | P45P | ccA | ccC | 4 | 6 | B.1.596 | 0.000349 |
ORF7a | 45 | P45P | ccA | ccT | 2 | 6 | B.1.596 | 0.000174 |
ORF7a | 45 | P45L | cCa | cTa | 6 | 6 | C.36.3 | 0.003403 |
ORF7a | 45 | P45S | Cca | Tca | 6 | 6 | C.37.1 | 0.015707 |
ORF7a | 45 | P45S | Cca | Tca | 6 | 6 | P.1 | 0.000095 |
ORF7a | 45 | P45S | Cca | Tca | 5 | 5 | AY.109 | 0.003698 |
ORF7a | 45 | P45S | Cca | Tca | 5 | 5 | AY.120 | 0.000186 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | AY.16 | 0.001898 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | AY.21 | 0.009488 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | AY.3.1 | 0.000426 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 5 | AY.39 | 0.000099 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 5 | AY.39 | 0.000025 |
ORF7a | 45 | P45del | CCA | --- | 5 | 5 | AY.4.2 | 0.000108 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | AY.4.2.1 | 0.000745 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | AY.4.4 | 0.002046 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 5 | AY.60 | 0.003752 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 5 | AY.60 | 0.000938 |
ORF7a | 45 | P45del | CCA | --- | 5 | 5 | AY.92 | 0.001436 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 5 | AY.93 | 0.001092 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 5 | AY.93 | 0.000273 |
ORF7a | 45 | P45del2 | cCA | c-- | 5 | 5 | B.1 | 0.000046 |
ORF7a | 45 | P45Q | cCa | cAa | 5 | 5 | B.1 | 0.000046 |
ORF7a | 45 | P45S | Cca | Tca | 5 | 5 | B.1.1 | 0.000091 |
ORF7a | 45 | P45del | CCA | --- | 5 | 5 | B.1.1.56 | 0.089286 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | B.1.1.70 | 0.001705 |
ORF7a | 45 | P45P | ccA | ccC | 3 | 5 | B.1.160 | 0.000094 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 5 | B.1.160 | 0.000062 |
ORF7a | 45 | P45P | ccA | ccC | 3 | 5 | B.1.177 | 0.00004 |
ORF7a | 45 | P45P | ccA | ccT | 2 | 5 | B.1.177 | 0.000026 |
ORF7a | 45 | P45L | CCa | TTa | 4 | 5 | B.1.177.21 | 0.000306 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 5 | B.1.177.21 | 0.000076 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | B.1.234 | 0.00066 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | B.1.243 | 0.000348 |
ORF7a | 45 | P45P | ccA | ccC | 4 | 5 | B.1.351 | 0.000119 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 5 | B.1.351 | 0.00003 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | B.1.596 | 0.000436 |
ORF7a | 45 | P45del2 | CCa | --a | 2 | 5 | B.1.617.2 | 0.000008 |
ORF7a | 45 | P45del2 | cCA | c-- | 2 | 5 | B.1.617.2 | 0.000008 |
ORF7a | 45 | P45del2 | CCA | T-- | 1 | 5 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | B.1.628 | 0.001762 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | D.2 | 0.000375 |
ORF7a | 45 | P45L | cCa | cTa | 5 | 5 | P.1.14 | 0.000239 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 4 | A.23.1 | 0.002817 |
ORF7a | 45 | P45del | CCA | --- | 4 | 4 | AY.121 | 0.000541 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 4 | AY.20 | 0.000155 |
ORF7a | 45 | P45T | CcA | AcT | 3 | 4 | AY.25 | 0.000018 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 4 | AY.25 | 0.000006 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 4 | AY.30 | 0.001583 |
ORF7a | 45 | P45del | CCA | --- | 4 | 4 | AY.33 | 0.000267 |
ORF7a | 45 | P45S | Cca | Tca | 4 | 4 | AY.34 | 0.000388 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 4 | AY.36 | 0.000593 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 4 | AY.38 | 0.000999 |
ORF7a | 45 | P45L | CCa | TTa | 2 | 4 | AY.38 | 0.000999 |
ORF7a | 45 | P45S | Cca | Tca | 4 | 4 | AY.4.2 | 0.000087 |
ORF7a | 45 | P45S | Cca | Tca | 4 | 4 | AY.4.5 | 0.00043 |
ORF7a | 45 | P45del | CCA | --- | 4 | 4 | AY.40 | 0.003857 |
ORF7a | 45 | P45R | cCa | cGa | 4 | 4 | AY.43 | 0.000018 |
ORF7a | 45 | P45P | ccA | ccG | 3 | 4 | AY.5 | 0.000062 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 4 | AY.5 | 0.000021 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 4 | AY.57 | 0.001969 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 4 | AY.57 | 0.000656 |
ORF7a | 45 | P45del | CCA | --- | 4 | 4 | AY.9.2 | 0.000147 |
ORF7a | 45 | P45S | Cca | Tca | 4 | 4 | AY.93 | 0.001092 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 4 | AY.96 | 0.006224 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 4 | AY.96 | 0.002075 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 4 | B.1.1.63 | 0.001543 |
ORF7a | 45 | P45X | CCa | TAa | 4 | 4 | B.1.1.7 | 0.000004 |
ORF7a | 45 | P45N | CCA | AAT | 4 | 4 | B.1.1.7 | 0.000004 |
ORF7a | 45 | P45S | Cca | Tca | 4 | 4 | B.1.177.12 | 0.000607 |
ORF7a | 45 | P45F | CCA | TTT | 4 | 4 | B.1.177.21 | 0.000306 |
ORF7a | 45 | P45S | Cca | Tca | 4 | 4 | B.1.221 | 0.000284 |
ORF7a | 45 | P45P | ccA | ccT | 2 | 4 | B.1.221 | 0.000142 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 4 | B.1.221 | 0.000142 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 4 | B.1.427 | 0.000202 |
ORF7a | 45 | P45L | cCa | cTa | 4 | 4 | B.1.525 | 0.000453 |
ORF7a | 45 | P45A | CcA | GcT | 3 | 4 | B.1.617.2 | 0.000011 |
ORF7a | 45 | P45A | Cca | Gca | 1 | 4 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45S | Cca | Tca | 4 | 4 | P.1.14 | 0.000191 |
ORF7a | 45 | P45P | ccA | ccG | 4 | 4 | P.1.14 | 0.000191 |
ORF7a | 45 | P45P | ccA | ccC | 4 | 4 | Q.3 | 0.00058 |
ORF7a | 45 | P45C | CCA | TGT | 3 | 3 | All | 0.000001 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 3 | AY.10 | 0.00106 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 3 | AY.10 | 0.00053 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | AY.100 | 0.000138 |
ORF7a | 45 | P45T | Cca | Aca | 3 | 3 | AY.103 | 0.000019 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.118 | 0.000188 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | AY.119 | 0.000106 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | AY.121 | 0.000406 |
ORF7a | 45 | P45E | CCa | GAa | 3 | 3 | AY.25 | 0.000018 |
ORF7a | 45 | P45N | CCA | AAT | 2 | 3 | AY.25 | 0.000012 |
ORF7a | 45 | P45N | CCA | AAC | 1 | 3 | AY.25 | 0.000006 |
ORF7a | 45 | P45R | cCa | cGa | 3 | 3 | AY.26 | 0.000085 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 3 | AY.26 | 0.000057 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 3 | AY.26 | 0.000028 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.29.1 | 0.000662 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.35 | 0.000699 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF7a | 45 | P45del2 | cCA | c-- | 3 | 3 | AY.44 | 0.000018 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.45 | 0.000365 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 3 | AY.46 | 0.000208 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 3 | AY.46 | 0.000104 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.46.5 | 0.000595 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | AY.47 | 0.000093 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | AY.55 | 0.002752 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.61 | 0.000314 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 3 | AY.61 | 0.00021 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 3 | AY.61 | 0.000105 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | AY.62 | 0.001307 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | AY.75.1 | 0.000541 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | AY.8 | 0.001818 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 3 | AY.86 | 0.00166 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 3 | AY.86 | 0.00083 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.88 | 0.002653 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | AY.98 | 0.000237 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.1.1 | 0.00098 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | B.1.1.214 | 0.000166 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | B.1.1.25 | 0.001706 |
ORF7a | 45 | P45P | ccA | ccC | 3 | 3 | B.1.1.39 | 0.001529 |
ORF7a | 45 | P45F | CCA | TTT | 3 | 3 | B.1.1.7 | 0.000003 |
ORF7a | 45 | P45Y | CCA | TAT | 3 | 3 | B.1.1.7 | 0.000003 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 3 | B.1.139 | 0.001466 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 3 | B.1.139 | 0.000733 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.177.32 | 0.004049 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.177.43 | 0.004431 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.177.86 | 0.00055 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.222 | 0.005076 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | B.1.234 | 0.000396 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 3 | B.1.234 | 0.000264 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 3 | B.1.234 | 0.000132 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.258 | 0.0002 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.265 | 0.003812 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 3 | B.1.291 | 0.038462 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 3 | B.1.291 | 0.019231 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | B.1.351 | 0.000089 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.36 | 0.000438 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | B.1.428 | 0.003061 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | B.1.526 | 0.000071 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.564.1 | 0.004732 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.575 | 0.00091 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.595 | 0.000783 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | B.1.596 | 0.000261 |
ORF7a | 45 | P45X | CCa | TAa | 3 | 3 | B.1.617.2 | 0.000011 |
ORF7a | 45 | P45V | CCA | GTT | 3 | 3 | B.1.617.2 | 0.000011 |
ORF7a | 45 | P45I | CCA | ATT | 3 | 3 | B.1.617.2 | 0.000011 |
ORF7a | 45 | P45T | CcA | AcT | 2 | 3 | B.1.617.2 | 0.000008 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 3 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | B.1.621 | 0.000266 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | B.1.626 | 0.017143 |
ORF7a | 45 | P45del2 | CCa | --a | 3 | 3 | B.1.637 | 0.000219 |
ORF7a | 45 | P45L | cCa | cTa | 3 | 3 | B.1.637 | 0.000219 |
ORF7a | 45 | P45del | CCA | --- | 3 | 3 | Q.8 | 0.000495 |
ORF7a | 45 | P45S | Cca | Tca | 3 | 3 | R.1 | 0.00027 |
ORF7a | 45 | P45A | Cca | Gca | 2 | 2 | 0.111111 | |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | A | 0.000774 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | A | 0.000387 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 2 | A | 0.000387 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 2 | A.1 | 0.000282 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | A.1 | 0.000282 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | A.2.5 | 0.000998 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | A.28 | 0.005291 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | A.28 | 0.005291 |
ORF7a | 45 | P45G | CCA | GGT | 1 | 2 | All | 0 |
ORF7a | 45 | P45G | CCa | GGa | 1 | 2 | All | 0 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AU.2 | 0.004843 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.107 | 0.000932 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.108 | 0.002205 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.109 | 0.001479 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.110 | 0.000225 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.114 | 0.000462 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | AY.117 | 0.000169 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 2 | AY.118 | 0.000125 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | AY.119 | 0.000035 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | AY.119 | 0.000035 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.13 | 0.000322 |
ORF7a | 45 | P45R | cCa | cGa | 2 | 2 | AY.16 | 0.000759 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | AY.20 | 0.000078 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | AY.23 | 0.000139 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.24 | 0.000862 |
ORF7a | 45 | P45C | CCA | TGT | 2 | 2 | AY.25 | 0.000012 |
ORF7a | 45 | P45G | CCA | GGT | 1 | 2 | AY.25 | 0.000006 |
ORF7a | 45 | P45G | CCa | GGa | 1 | 2 | AY.25 | 0.000006 |
ORF7a | 45 | P45R | CCa | AGa | 1 | 2 | AY.25 | 0.000006 |
ORF7a | 45 | P45R | cCA | cGT | 1 | 2 | AY.25 | 0.000006 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.29.1 | 0.000441 |
ORF7a | 45 | P45T | Cca | Aca | 2 | 2 | AY.3 | 0.00002 |
ORF7a | 45 | P45P | ccA | ccT | 2 | 2 | AY.34 | 0.000194 |
ORF7a | 45 | P45R | cCa | cGa | 2 | 2 | AY.36 | 0.000296 |
ORF7a | 45 | P45del2 | cCA | c-- | 2 | 2 | AY.39 | 0.000049 |
ORF7a | 45 | P45R | cCa | cGa | 2 | 2 | AY.4 | 0.000003 |
ORF7a | 45 | P45del2 | cCA | c-- | 2 | 2 | AY.4.2 | 0.000043 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.4.3 | 0.001684 |
ORF7a | 45 | P45Q | cCa | cAa | 2 | 2 | AY.43 | 0.000009 |
ORF7a | 45 | P45del1 | CCA | TT- | 2 | 2 | AY.43 | 0.000009 |
ORF7a | 45 | P45del2 | cCA | c-- | 2 | 2 | AY.43 | 0.000009 |
ORF7a | 45 | P45Q | cCa | cAa | 2 | 2 | AY.44 | 0.000012 |
ORF7a | 45 | P45T | Cca | Aca | 2 | 2 | AY.44 | 0.000012 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | AY.46 | 0.000208 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.46.5 | 0.000397 |
ORF7a | 45 | P45Q | cCa | cAa | 2 | 2 | AY.47 | 0.000062 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.49 | 0.00639 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | AY.5.4 | 0.000553 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.53 | 0.000575 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | AY.67 | 0.000464 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | AY.67 | 0.000464 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.7.1 | 0.000225 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | AY.7.1 | 0.000113 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | AY.7.1 | 0.000113 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.72 | 0.002721 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | AY.73 | 0.001331 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | AY.84 | 0.000437 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | AY.84 | 0.000437 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.9 | 0.000135 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | AY.9 | 0.000068 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | AY.9 | 0.000068 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.9.1 | 0.000167 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 2 | AY.90 | 0.000684 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 2 | AY.90 | 0.000684 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 2 | AY.98.1 | 0.000097 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | AY.99.2 | 0.000184 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B | 0.000256 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 2 | B | 0.000256 |
ORF7a | 45 | P45A | Cca | Gca | 2 | 2 | B.1 | 0.000018 |
ORF7a | 45 | P45R | cCa | cGa | 2 | 2 | B.1 | 0.000018 |
ORF7a | 45 | P45K | CCa | AAa | 2 | 2 | B.1.1 | 0.000036 |
ORF7a | 45 | P45Q | cCa | cAa | 2 | 2 | B.1.1 | 0.000036 |
ORF7a | 45 | P45del2 | cCA | c-- | 2 | 2 | B.1.1 | 0.000036 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.1.121 | 0.004854 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.1.214 | 0.000111 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 2 | B.1.1.222 | 0.000408 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.1.222 | 0.000408 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.1.318 | 0.000604 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.1.33 | 0.000842 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | B.1.1.335 | 0.025974 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | B.1.1.409 | 0.002833 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | B.1.1.409 | 0.002833 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.1.464 | 0.002946 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.1.486 | 0.003155 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | B.1.146 | 0.004237 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 2 | B.1.146 | 0.004237 |
ORF7a | 45 | P45Q | cCa | cAa | 2 | 2 | B.1.177 | 0.000026 |
ORF7a | 45 | P45X | CCa | TAa | 2 | 2 | B.1.177.21 | 0.000153 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | B.1.177.33 | 0.003289 |
ORF7a | 45 | P45P | ccA | ccC | 2 | 2 | B.1.177.43 | 0.002954 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.177.43 | 0.002954 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.177.62 | 0.002384 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.177.81 | 0.000379 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.177.86 | 0.000367 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.214.2 | 0.001199 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.241 | 0.001623 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | B.1.243 | 0.000139 |
ORF7a | 45 | P45R | cCa | cGa | 2 | 2 | B.1.258 | 0.000133 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.258.11 | 0.000793 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.258.14 | 0.001961 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | B.1.258.21 | 0.015504 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.279 | 0.001027 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.351.2 | 0.000605 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 2 | B.1.375 | 0.00082 |
ORF7a | 45 | P45L | cCA | cTT | 1 | 2 | B.1.375 | 0.00082 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | B.1.466.2 | 0.000391 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | B.1.466.2 | 0.000391 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 2 | B.1.470 | 0.002809 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 2 | B.1.497 | 0.000315 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | B.1.497 | 0.000315 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 2 | B.1.525 | 0.000226 |
ORF7a | 45 | P45del2 | cCA | c-- | 2 | 2 | B.1.526 | 0.000047 |
ORF7a | 45 | P45del1 | ccA | cc- | 2 | 2 | B.1.526 | 0.000047 |
ORF7a | 45 | P45I | CCA | ATT | 1 | 2 | B.1.576 | 0.000907 |
ORF7a | 45 | P45I | CCa | ATa | 1 | 2 | B.1.576 | 0.000907 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | B.1.582 | 0.000491 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | B.1.582 | 0.000491 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.609 | 0.000959 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.617.1 | 0.000258 |
ORF7a | 45 | P45K | CCa | AAa | 2 | 2 | B.1.617.2 | 0.000008 |
ORF7a | 45 | P45D | CCA | GAT | 2 | 2 | B.1.617.2 | 0.000008 |
ORF7a | 45 | P45Y | CCA | TAT | 2 | 2 | B.1.617.2 | 0.000008 |
ORF7a | 45 | P45E | CCa | GAa | 1 | 2 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45E | CCA | GAG | 1 | 2 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | B.1.617.3 | 0.00597 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.623 | 0.001073 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | B.1.632 | 0.013423 |
ORF7a | 45 | P45P | ccA | ccG | 2 | 2 | B.1.637 | 0.000146 |
ORF7a | 45 | P45del | CCA | --- | 2 | 2 | C.36.3 | 0.001134 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | C.37 | 0.000232 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 2 | C.37 | 0.000116 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | C.37 | 0.000116 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | D.2 | 0.00015 |
ORF7a | 45 | P45del2 | cCA | c-- | 2 | 2 | P.1 | 0.000032 |
ORF7a | 45 | P45T | Cca | Aca | 2 | 2 | P.1 | 0.000032 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | P.1.17 | 0.000324 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | P.2 | 0.000373 |
ORF7a | 45 | P45S | Cca | Tca | 2 | 2 | Q.2 | 0.001227 |
ORF7a | 45 | P45L | cCa | cTa | 2 | 2 | Q.3 | 0.00029 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 2 | Q.4 | 0.000455 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 2 | Q.4 | 0.000455 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | A.1 | 0.000282 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | A.1 | 0.000282 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | A.2 | 0.000662 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | A.2 | 0.000662 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | A.23.1 | 0.000704 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | A.23.1 | 0.000704 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | A.27 | 0.001656 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AD.2 | 0.000219 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | AY.100 | 0.000046 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.102 | 0.000027 |
ORF7a | 45 | P45A | Cca | Gca | 1 | 1 | AY.103 | 0.000006 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | AY.103 | 0.000006 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.103 | 0.000006 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.105 | 0.000643 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.107 | 0.000466 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | AY.109 | 0.00074 |
ORF7a | 45 | P45E | CCa | GAa | 1 | 1 | AY.110 | 0.000113 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.111 | 0.000183 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.113 | 0.000142 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.114 | 0.000231 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.116 | 0.000287 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | AY.116 | 0.000287 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.116.1 | 0.000311 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | AY.116.1 | 0.000311 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.118 | 0.000063 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.12 | 0.000316 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | AY.12 | 0.000316 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 45 | P45del2 | CCa | --a | 1 | 1 | AY.120.1 | 0.000321 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | AY.120.1 | 0.000321 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | AY.121 | 0.000135 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | AY.13 | 0.000161 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.13 | 0.000161 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | AY.14 | 0.000088 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.14 | 0.000088 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | AY.16 | 0.00038 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.16 | 0.00038 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.16.1 | 0.00047 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.16.1 | 0.00047 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.20 | 0.000039 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.22 | 0.002092 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.23.1 | 0.000417 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.23.1 | 0.000417 |
ORF7a | 45 | P45K | CCa | AAa | 1 | 1 | AY.25 | 0.000006 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | AY.26 | 0.000028 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.29 | 0.000016 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | AY.29 | 0.000016 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | AY.29 | 0.000016 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.29.1 | 0.000221 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | AY.3 | 0.00001 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.3 | 0.00001 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | AY.3 | 0.00001 |
ORF7a | 45 | P45I | CCA | ATT | 1 | 1 | AY.3.1 | 0.000085 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.30 | 0.000396 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | AY.30 | 0.000396 |
ORF7a | 45 | P45N | CCA | AAC | 1 | 1 | AY.33 | 0.000067 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.35 | 0.000233 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | AY.37 | 0.000316 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.38 | 0.000499 |
ORF7a | 45 | P45del1 | CcA | Ac- | 1 | 1 | AY.4 | 0.000002 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | AY.4.2 | 0.000022 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.4.4 | 0.000409 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.41 | 0.000294 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | AY.42 | 0.00004 |
ORF7a | 45 | P45del2 | CCa | --a | 1 | 1 | AY.42 | 0.00004 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.42 | 0.00004 |
ORF7a | 45 | P45H | cCA | cAC | 1 | 1 | AY.43 | 0.000004 |
ORF7a | 45 | P45I | CCa | ATa | 1 | 1 | AY.43 | 0.000004 |
ORF7a | 45 | P45A | Cca | Gca | 1 | 1 | AY.43 | 0.000004 |
ORF7a | 45 | P45T | CcA | AcT | 1 | 1 | AY.43 | 0.000004 |
ORF7a | 45 | P45V | CCa | GTa | 1 | 1 | AY.44 | 0.000006 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | AY.44 | 0.000006 |
ORF7a | 45 | P45del1 | CcA | Ac- | 1 | 1 | AY.44 | 0.000006 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | AY.45 | 0.000122 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | AY.45 | 0.000122 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.46 | 0.000104 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.46.2 | 0.000635 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | AY.46.2 | 0.000635 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | AY.46.4 | 0.000165 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.46.6 | 0.000072 |
ORF7a | 45 | P45T | CcA | AcT | 1 | 1 | AY.5.4 | 0.000277 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.5.4 | 0.000277 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.50 | 0.000799 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.55 | 0.000917 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.63 | 0.000387 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.66 | 0.00107 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.66 | 0.00107 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.67 | 0.000464 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.68 | 0.000274 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.68 | 0.000274 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.7 | 0.000196 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.7.1 | 0.000113 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.73 | 0.000665 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.74 | 0.000116 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | AY.75.1 | 0.00018 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.75.1 | 0.00018 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.77 | 0.001127 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | AY.77 | 0.001127 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.79 | 0.001211 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.80 | 0.001129 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.81 | 0.001992 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | AY.82 | 0.001357 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.83 | 0.001724 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.84 | 0.000437 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.85 | 0.000427 |
ORF7a | 45 | P45A | Cca | Gca | 1 | 1 | AY.87 | 0.000833 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.88 | 0.000884 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | AY.9.1 | 0.000084 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.9.1 | 0.000084 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.90 | 0.000684 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.91 | 0.00073 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.91.1 | 0.004065 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | AY.94 | 0.000443 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AY.94 | 0.000443 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | AY.95 | 0.000761 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | AY.96 | 0.002075 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | AY.99.2 | 0.000092 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | AZ.2 | 0.000821 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B | 0.000128 |
ORF7a | 45 | P45X | CCa | TAa | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.1.121 | 0.002427 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.121 | 0.002427 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.157 | 0.000913 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.1.170 | 0.001247 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.176 | 0.000439 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | B.1.1.214 | 0.000055 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.218 | 0.007692 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.226 | 0.005814 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.1.228 | 0.003049 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.231 | 0.003096 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.236 | 0.006897 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.1.241 | 0.00207 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.1.253 | 0.002506 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.277 | 0.000759 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.294 | 0.001266 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.304 | 0.002809 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.312 | 0.001912 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.318 | 0.000302 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.1.33 | 0.000421 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.334 | 0.016393 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.344 | 0.010753 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.356 | 0.008547 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.37 | 0.000193 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.1.374 | 0.002375 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.376 | 0.005952 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.377 | 0.001381 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.1.378 | 0.007299 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.385 | 0.004464 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.398 | 0.003226 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.1.398 | 0.003226 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.412 | 0.007634 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.434 | 0.000349 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.448 | 0.002033 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.1.481 | 0.071429 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.1.519 | 0.00004 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.519 | 0.00004 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.1.522 | 0.017241 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.523 | 0.001563 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.1.70 | 0.000341 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.74 | 0.00431 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.1.98 | 0.018519 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.112 | 0.005181 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.115 | 0.021739 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.126 | 0.001276 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | B.1.128 | 0.000635 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.128 | 0.000635 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.131 | 0.008772 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.160.10 | 0.008065 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.160.14 | 0.002119 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | B.1.160.14 | 0.002119 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.160.26 | 0.002421 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | B.1.160.33 | 0.004425 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 45 | P45F | CCA | TTT | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.177.16 | 0.000664 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.177.23 | 0.003236 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.177.35 | 0.000691 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.177.4 | 0.000211 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.177.52 | 0.001757 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | B.1.177.53 | 0.002392 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.177.54 | 0.000606 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.177.58 | 0.001332 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.177.6 | 0.000977 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.177.60 | 0.000218 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.177.63 | 0.002703 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.177.7 | 0.000165 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | B.1.2 | 0.000009 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.206 | 0.000816 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.210 | 0.002132 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.214.2 | 0.0006 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.221 | 0.000071 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.234 | 0.000132 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.239 | 0.001221 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | B.1.240 | 0.000216 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.240 | 0.000216 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.240 | 0.000216 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.241 | 0.000812 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.243 | 0.00007 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | B.1.243 | 0.00007 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.258.11 | 0.000396 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.258.16 | 0.001637 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.258.17 | 0.000104 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.258.17 | 0.000104 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.258.17 | 0.000104 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.311 | 0.000275 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.320 | 0.001245 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | B.1.334 | 0.018182 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.336 | 0.002439 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.349 | 0.000715 |
ORF7a | 45 | P45R | cCA | cGG | 1 | 1 | B.1.351 | 0.00003 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | B.1.351 | 0.00003 |
ORF7a | 45 | P45T | Cca | Aca | 1 | 1 | B.1.351 | 0.00003 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.351.2 | 0.000303 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | B.1.36 | 0.000146 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.36.18 | 0.00042 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.36.29 | 0.000517 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.36.31 | 0.001751 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | B.1.36.37 | 0.002778 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.36.8 | 0.001 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.36.8 | 0.001 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.361 | 0.001289 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.362 | 0.001541 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.367 | 0.000792 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.369 | 0.000285 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.371 | 0.001122 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.375 | 0.00082 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.391 | 0.001127 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.396 | 0.000706 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.399 | 0.001934 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.413 | 0.004255 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.416 | 0.001269 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | B.1.416 | 0.001269 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.426 | 0.001009 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | B.1.427 | 0.00005 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.427 | 0.00005 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | B.1.429 | 0.000024 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | B.1.429 | 0.000024 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.438.1 | 0.000107 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.438.1 | 0.000107 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.456 | 0.003268 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.459 | 0.004082 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.466.2 | 0.000391 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.466.2 | 0.000391 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | B.1.467 | 0.04 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | B.1.473 | 0.019231 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.503 | 0.002488 |
ORF7a | 45 | P45P | ccA | ccG | 1 | 1 | B.1.517 | 0.000427 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.517 | 0.000427 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.525 | 0.000113 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.526 | 0.000024 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.535 | 0.028571 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.538 | 0.008065 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.540 | 0.009709 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.551 | 0.00129 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.561 | 0.000397 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.565 | 0.00081 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | B.1.568 | 0.001111 |
ORF7a | 45 | P45F | CCA | TTT | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 45 | P45N | CCA | AAT | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 45 | P45X | CCa | TAa | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 45 | P45Y | CCA | TAT | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 45 | P45L | CCa | TTa | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 45 | P45K | CCa | AAa | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.582 | 0.000491 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.588 | 0.00091 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.588 | 0.00091 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | B.1.595 | 0.000261 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.595 | 0.000261 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.596 | 0.000087 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.1.596 | 0.000087 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.597 | 0.00463 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | B.1.606 | 0.006024 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | B.1.609 | 0.000479 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.617.1 | 0.000129 |
ORF7a | 45 | P45C | CCA | TGT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45del1 | Cca | -ca | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45H | cCA | cAT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF7a | 45 | P45del2 | CCa | --a | 1 | 1 | B.1.621 | 0.000089 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | B.1.621.1 | 0.000506 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.621.1 | 0.000506 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.636 | 0.006711 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.637 | 0.000073 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.83 | 0.015385 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.1.88.1 | 0.004808 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.1.9.1 | 0.032258 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.1.91 | 0.002075 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | B.40 | 0.000364 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | B.40 | 0.000364 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | B.55 | 0.00295 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | B.6 | 0.00091 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | C.1 | 0.002392 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | C.16 | 0.00106 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | C.16 | 0.00106 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | C.22 | 0.071429 |
ORF7a | 45 | P45P | ccA | ccC | 1 | 1 | C.35 | 0.000774 |
ORF7a | 45 | P45A | Cca | Gca | 1 | 1 | C.35 | 0.000774 |
ORF7a | 45 | P45R | cCa | cGa | 1 | 1 | C.36.3 | 0.000567 |
ORF7a | 45 | P45del2 | cCA | c-- | 1 | 1 | C.37 | 0.000116 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | K.3 | 0.006173 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | N.5 | 0.001767 |
ORF7a | 45 | P45Q | cCa | cAa | 1 | 1 | P.1 | 0.000016 |
ORF7a | 45 | P45K | CCa | AAa | 1 | 1 | P.1 | 0.000016 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | P.1.1 | 0.000318 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | P.1.12 | 0.000484 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | P.1.12 | 0.000484 |
ORF7a | 45 | P45del1 | CcA | -cN | 1 | 1 | P.1.15 | 0.000232 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | P.1.15 | 0.000232 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | P.1.16 | 0.000374 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | P.1.16 | 0.000374 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | P.1.2 | 0.001156 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | P.1.3 | 0.034483 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 45 | P45L | cCa | cTa | 1 | 1 | P.1.7 | 0.000319 |
ORF7a | 45 | P45P | ccA | ccT | 1 | 1 | P.1.7 | 0.000319 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | P.2 | 0.000187 |
ORF7a | 45 | P45del1 | ccA | cc- | 1 | 1 | P.2 | 0.000187 |
ORF7a | 45 | P45S | Cca | Tca | 1 | 1 | Q.1 | 0.000126 |
ORF7a | 45 | P45del | CCA | --- | 1 | 1 | Q.7 | 0.001111 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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