CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 43

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a43N43deldelAAT---23372337127520-27522
ORF7a43N43YnonsynAatTat101510110.99605927520-27522
ORF7a43N43YnonsynAaTTaC101540.0039408927520-27522
ORF7a43N43NsynaaTaaC553553127520-27522
ORF7a43N43SnonsynaAtaGt3173020.95268127520-27522
ORF7a43N43SnonsynAAtTCt31760.018927427520-27522
ORF7a43N43SnonsynAATTCA31750.015772927520-27522
ORF7a43N43SnonsynaATaGC31730.0094637227520-27522
ORF7a43N43SnonsynAATTCG31710.0031545727520-27522
ORF7a43N43del2delaATa--3053000.98360727520-27522
ORF7a43N43del2delAAt--t30540.013114827520-27522
ORF7a43N43del2delAATG--30510.0032786927520-27522
ORF7a43N43KnonsynaaTaaG1531250.81699327520-27522
ORF7a43N43KnonsynaaTaaA153280.18300727520-27522
ORF7a43N43DnonsynAatGat117117127520-27522
ORF7a43N43TnonsynaAtaCt1161030.88793127520-27522
ORF7a43N43TnonsynaATaCC11690.077586227520-27522
ORF7a43N43TnonsynaATaCA11630.025862127520-27522
ORF7a43N43TnonsynaATaCG11610.0086206927520-27522
ORF7a43N43InonsynaAtaTt1131050.92920427520-27522
ORF7a43N43InonsynaATaTA11380.070796527520-27522
ORF7a43N43del1delaaTaa-97890.91752627520-27522
ORF7a43N43del1delAat-at9780.082474227520-27522
ORF7a43N43HnonsynAatCat40310.77527520-27522
ORF7a43N43HnonsynAaTCaC4090.22527520-27522
ORF7a43N43LnonsynAATTTA1780.47058827520-27522
ORF7a43N43LnonsynAATCTC1740.23529427520-27522
ORF7a43N43LnonsynAATCTA1720.11764727520-27522
ORF7a43N43LnonsynAAtCTt1720.11764727520-27522
ORF7a43N43LnonsynAATTTG1710.058823527520-27522
ORF7a43N43XnonsynAaTTaA1090.927520-27522
ORF7a43N43FnonsynAAtTTt1080.827520-27522
ORF7a43N43FnonsynAATTTC1020.227520-27522
ORF7a43N43XnonsynAaTTaG1010.127520-27522
ORF7a43N43GnonsynAAtGGt77127520-27522
ORF7a43N43PnonsynAAtCCt420.527520-27522
ORF7a43N43PnonsynAATCCC410.2527520-27522
ORF7a43N43PnonsynAATCCA410.2527520-27522
ORF7a43N43VnonsynAAtGTt210.527520-27522
ORF7a43N43VnonsynAATGTG210.527520-27522
ORF7a43N43MnonsynaATaTG11127520-27522
ORF7a43N43QnonsynAaTCaA11127520-27522

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a43N43delAAT---23372337All0.000447
ORF7a43N43YAatTat10111015All0.000193
ORF7a43N43YAaTTaC41015All0.000001
ORF7a43N43YAatTat577577B.1.617.10.074413
ORF7a43N43NaaTaaC553553All0.000106
ORF7a43N43delAAT---361361B.1.1.70.000323
ORF7a43N43SaAtaGt302317All0.000058
ORF7a43N43SAAtTCt6317All0.000001
ORF7a43N43SAATTCA5317All0.000001
ORF7a43N43SaATaGC3317All0.000001
ORF7a43N43SAATTCG1317All0
ORF7a43N43del2aATa--300305All0.000057
ORF7a43N43del2AAt--t4305All0.000001
ORF7a43N43del2AATG--1305All0
ORF7a43N43delAAT---269269B.1.617.20.001013
ORF7a43N43delAAT---258258AY.40.000402
ORF7a43N43NaaTaaC202202B.1.1.70.000181
ORF7a43N43del2aATa--192194AY.250.001155
ORF7a43N43del2AAt--t2194AY.250.000012
ORF7a43N43delAAT---182182AY.250.001095
ORF7a43N43delAAT---179179B.1.177.210.013688
ORF7a43N43KaaTaaG125153All0.000024
ORF7a43N43KaaTaaA28153All0.000005
ORF7a43N43YAatTat138138AY.50.00285
ORF7a43N43SaAtaGt125125B.1.1.70.000112
ORF7a43N43DAatGat117117All0.000022
ORF7a43N43TaAtaCt103116All0.00002
ORF7a43N43TaATaCC9116All0.000002
ORF7a43N43TaATaCA3116All0.000001
ORF7a43N43TaATaCG1116All0
ORF7a43N43IaAtaTt105113All0.00002
ORF7a43N43IaATaTA8113All0.000002
ORF7a43N43NaaTaaC100100AY.340.009696
ORF7a43N43del1aaTaa-8997All0.000017
ORF7a43N43del1Aat-at897All0.000002
ORF7a43N43delAAT---9090AY.1030.000559
ORF7a43N43delAAT---8383AY.30.000826
ORF7a43N43del2aATa--7878AY.40.000121
ORF7a43N43delAAT---6060AY.440.000365
ORF7a43N43delAAT---5858AY.390.001433
ORF7a43N43delAAT---5656AY.290.000883
ORF7a43N43delAAT---5656AY.39.10.002218
ORF7a43N43delAAT---5252AY.1000.002392
ORF7a43N43SaAtaGt5051AY.430.000222
ORF7a43N43SAAtTCt151AY.430.000004
ORF7a43N43delAAT---4949AY.3.10.004178
ORF7a43N43NaaTaaC4242B.1.1.3430.875
ORF7a43N43HAatCat3140All0.000006
ORF7a43N43HAaTCaC940All0.000002
ORF7a43N43YAatTat4040B.1.1.70.000036
ORF7a43N43delAAT---3939AY.430.000173
ORF7a43N43SaAtaGt3737AY.470.001151
ORF7a43N43delAAT---3636B.1.1.2840.003866
ORF7a43N43delAAT---3636B.1.6210.003187
ORF7a43N43KaaTaaG3535B.10.000321
ORF7a43N43YAatTat3133B.1.617.20.000117
ORF7a43N43YAaTTaC233B.1.617.20.000008
ORF7a43N43DAatGat3232AY.440.000195
ORF7a43N43delAAT---3131B.10.000284
ORF7a43N43delAAT---3030AY.1020.000795
ORF7a43N43DAatGat3030B.1.1.70.000027
ORF7a43N43YAatTat2828AY.40.000044
ORF7a43N43YAatTat2525AY.1110.004579
ORF7a43N43del1aaTaa-2424B.1.1.70.000021
ORF7a43N43delAAT---2323B.1.1.2140.001276
ORF7a43N43KaaTaaG1623B.1.1.70.000014
ORF7a43N43KaaTaaA723B.1.1.70.000006
ORF7a43N43IaAtaTt2222AY.40.000034
ORF7a43N43SaAtaGt2222AY.50.000454
ORF7a43N43TaAtaCt2020AY.330.001336
ORF7a43N43NaaTaaC2020AY.40.000031
ORF7a43N43NaaTaaC1919B.1.20.000167
ORF7a43N43delAAT---1818AY.7.20.010067
ORF7a43N43NaaTaaC1818B.1.617.20.000068
ORF7a43N43LAATTTA817All0.000002
ORF7a43N43LAATCTC417All0.000001
ORF7a43N43LAATCTA217All0
ORF7a43N43LAAtCTt217All0
ORF7a43N43LAATTTG117All0
ORF7a43N43KaaTaaG1717AY.1030.000106
ORF7a43N43YAatTat1717AY.30.000169
ORF7a43N43DAatGat1717AY.40.000026
ORF7a43N43delAAT---1717B.1.1770.000224
ORF7a43N43delAAT---1717B.1.6370.001242
ORF7a43N43delAAT---1515AY.46.40.002468
ORF7a43N43YAatTat1414AY.39.10.000555
ORF7a43N43IaAtaTt914B.1.1.70.000008
ORF7a43N43IaATaTA514B.1.1.70.000004
ORF7a43N43YAatTat1313AY.1030.000081
ORF7a43N43del2aATa--1313AY.1030.000081
ORF7a43N43delAAT---1313C.370.001509
ORF7a43N43NaaTaaC1313P.10.000205
ORF7a43N43delAAT---1212B.1.3240.019262
ORF7a43N43delAAT---1111AY.260.000311
ORF7a43N43KaaTaaG1111AY.30.000109
ORF7a43N43YAatTat1111AY.390.000272
ORF7a43N43YAatTat1111AY.430.000049
ORF7a43N43del1aaTaa-1111AY.430.000049
ORF7a43N43delAAT---1111AY.470.000342
ORF7a43N43NaaTaaC1111B.1.1770.000145
ORF7a43N43delAAT---1111P.10.000173
ORF7a43N43XAaTTaA910All0.000002
ORF7a43N43FAAtTTt810All0.000002
ORF7a43N43FAATTTC210All0
ORF7a43N43XAaTTaG110All0
ORF7a43N43delAAT---1010AY.230.000697
ORF7a43N43KaaTaaG910AY.250.000054
ORF7a43N43IaAtaTt810AY.250.000048
ORF7a43N43SAATTCA310AY.250.000018
ORF7a43N43SAAtTCt310AY.250.000018
ORF7a43N43SaAtaGt310AY.250.000018
ORF7a43N43IaATaTA210AY.250.000012
ORF7a43N43KaaTaaA110AY.250.000006
ORF7a43N43SAATTCG110AY.250.000006
ORF7a43N43IaAtaTt1010AY.30.000099
ORF7a43N43del1aaTaa-1010AY.98.10.000484
ORF7a43N43TaAtaCt1010B.1.1.70.000009
ORF7a43N43NaaTaaC1010B.1.4290.000235
ORF7a43N43KaaTaaG910B.1.617.20.000034
ORF7a43N43KaaTaaA110B.1.617.20.000004
ORF7a43N43KaaTaaA79AY.1000.000322
ORF7a43N43KaaTaaG29AY.1000.000092
ORF7a43N43delAAT---99AY.200.00035
ORF7a43N43LAATTTA49AY.250.000024
ORF7a43N43LAATCTA29AY.250.000012
ORF7a43N43LAATCTC19AY.250.000006
ORF7a43N43LAAtCTt19AY.250.000006
ORF7a43N43LAATTTG19AY.250.000006
ORF7a43N43delAAT---99AY.4.20.000195
ORF7a43N43YAatTat99AY.440.000055
ORF7a43N43delAAT---99B.1.20.000079
ORF7a43N43KaaTaaG88AY.1200.000297
ORF7a43N43YAatTat88AY.1200.000297
ORF7a43N43YAatTat78AY.250.000042
ORF7a43N43YAaTTaC18AY.250.000006
ORF7a43N43TaAtaCt88AY.260.000226
ORF7a43N43NaaTaaC88AY.30.00008
ORF7a43N43delAAT---88AY.340.000776
ORF7a43N43HAatCat88AY.440.000049
ORF7a43N43NaaTaaC88B.10.000073
ORF7a43N43HAatCat88B.1.20.00007
ORF7a43N43NaaTaaC88B.1.36.270.006107
ORF7a43N43del2aATa--88B.1.617.20.00003
ORF7a43N43HAaTCaC68B.1.617.20.000023
ORF7a43N43HAatCat28B.1.617.20.000008
ORF7a43N43YAatTat88C.360.007286
ORF7a43N43delAAT---88R.10.00072
ORF7a43N43GAAtGGt77All0.000001
ORF7a43N43TaAtaCt37AY.250.000018
ORF7a43N43TaATaCA27AY.250.000012
ORF7a43N43TaATaCC17AY.250.000006
ORF7a43N43TaATaCG17AY.250.000006
ORF7a43N43YAatTat77AY.750.000392
ORF7a43N43GAAtGGt77B.10.000064
ORF7a43N43delAAT---77B.1.4290.000165
ORF7a43N43TaAtaCt77B.1.5170.002989
ORF7a43N43delAAT---77B.1.5250.000792
ORF7a43N43delAAT---77B.1.5260.000165
ORF7a43N43SaAtaGt77B.1.6280.002467
ORF7a43N43TaAtaCt77P.10.00011
ORF7a43N43YAatTat77P.10.00011
ORF7a43N43TaAtaCt66AY.1030.000037
ORF7a43N43NaaTaaC66AY.1190.000212
ORF7a43N43TaATaCC66AY.140.000528
ORF7a43N43TaAtaCt66AY.230.000418
ORF7a43N43NaaTaaC66AY.250.000036
ORF7a43N43SaAtaGt66AY.40.000009
ORF7a43N43IaAtaTt66AY.430.000027
ORF7a43N43delAAT---66AY.750.000336
ORF7a43N43delAAT---66B.1.10.000109
ORF7a43N43YAatTat66B.1.1.10.00196
ORF7a43N43IaAtaTt66B.1.4290.000141
ORF7a43N43TaAtaCt36B.1.617.20.000011
ORF7a43N43TaATaCC26B.1.617.20.000008
ORF7a43N43SAATTCA26B.1.617.20.000008
ORF7a43N43SAAtTCt26B.1.617.20.000008
ORF7a43N43TaATaCA16B.1.617.20.000004
ORF7a43N43SaATaGC16B.1.617.20.000004
ORF7a43N43SaAtaGt16B.1.617.20.000004
ORF7a43N43YAatTat55AY.1000.00023
ORF7a43N43delAAT---55AY.1190.000177
ORF7a43N43delAAT---55AY.1200.000186
ORF7a43N43KaaTaaG55AY.200.000194
ORF7a43N43SaAtaGt55AY.200.000194
ORF7a43N43del1aaTaa-55AY.250.00003
ORF7a43N43TaAtaCt55AY.40.000008
ORF7a43N43HAatCat55AY.430.000022
ORF7a43N43TaAtaCt55AY.430.000022
ORF7a43N43NaaTaaC55AY.440.00003
ORF7a43N43SaAtaGt55AY.440.00003
ORF7a43N43delAAT---55AY.98.10.000242
ORF7a43N43SaAtaGt55B.10.000046
ORF7a43N43TaAtaCt55B.1.10.000091
ORF7a43N43delAAT---55B.1.1.560.089286
ORF7a43N43delAAT---55B.1.1600.000156
ORF7a43N43NaaTaaC55B.1.3510.000149
ORF7a43N43del1Aat-at35B.1.617.20.000011
ORF7a43N43del1aaTaa-25B.1.617.20.000008
ORF7a43N43PAAtCCt24All0
ORF7a43N43PAATCCA14All0
ORF7a43N43PAATCCC14All0
ORF7a43N43del1aaTaa-44AY.1190.000141
ORF7a43N43IaAtaTt44AY.1200.000149
ORF7a43N43del1aaTaa-44AY.120.10.001284
ORF7a43N43delAAT---44AY.1210.000541
ORF7a43N43FAAtTTt34AY.250.000018
ORF7a43N43PAAtCCt24AY.250.000012
ORF7a43N43PAATCCA14AY.250.000006
ORF7a43N43FAATTTC14AY.250.000006
ORF7a43N43PAATCCC14AY.250.000006
ORF7a43N43HAatCat44AY.40.000006
ORF7a43N43del1aaTaa-44AY.40.000006
ORF7a43N43delAAT---44AY.400.003857
ORF7a43N43delAAT---44AY.420.000161
ORF7a43N43NaaTaaC44AY.430.000018
ORF7a43N43DAatGat44AY.430.000018
ORF7a43N43IaAtaTt44AY.440.000024
ORF7a43N43del1aaTaa-44AY.46.40.000658
ORF7a43N43delAAT---44AY.50.000083
ORF7a43N43YAatTat44AY.98.10.000194
ORF7a43N43NaaTaaC44B.1.10.000073
ORF7a43N43YAatTat44B.1.10.000073
ORF7a43N43LAATTTA34B.1.1.70.000003
ORF7a43N43LAATCTC14B.1.1.70.000001
ORF7a43N43del1aaTaa-44B.1.20.000035
ORF7a43N43SaAtaGt44B.1.20.000035
ORF7a43N43IaAtaTt44B.1.2430.000278
ORF7a43N43NaaTaaC44B.1.4000.001716
ORF7a43N43NaaTaaC44B.1.4270.000202
ORF7a43N43DAatGat44B.1.617.20.000015
ORF7a43N43IaAtaTt44B.1.617.20.000015
ORF7a43N43YAatTat33AY.1020.00008
ORF7a43N43del1aaTaa-33AY.1030.000019
ORF7a43N43delAAT---33AY.1180.000188
ORF7a43N43YAatTat33AY.1190.000106
ORF7a43N43NaaTaaC33AY.160.001139
ORF7a43N43XAaTTaA23AY.250.000012
ORF7a43N43HAaTCaC23AY.250.000012
ORF7a43N43XAaTTaG13AY.250.000006
ORF7a43N43HAatCat13AY.250.000006
ORF7a43N43NaaTaaC33AY.270.000194
ORF7a43N43NaaTaaC33AY.290.000047
ORF7a43N43NaaTaaC33AY.3.10.000256
ORF7a43N43delAAT---33AY.330.0002
ORF7a43N43delAAT---33AY.350.000699
ORF7a43N43KaaTaaG23AY.40.000003
ORF7a43N43KaaTaaA13AY.40.000002
ORF7a43N43NaaTaaC33AY.4.30.002525
ORF7a43N43delAAT---33AY.4.50.000322
ORF7a43N43delAAT---33AY.540.000286
ORF7a43N43delAAT---33AY.880.002653
ORF7a43N43IaAtaTt33AY.930.000819
ORF7a43N43SaAtaGt33B.1.1.2400.014085
ORF7a43N43delAAT---33B.1.1.250.001706
ORF7a43N43FAAtTTt33B.1.1.70.000003
ORF7a43N43XAaTTaA33B.1.1.70.000003
ORF7a43N43SaAtaGt33B.1.1600.000094
ORF7a43N43delAAT---33B.1.2340.000396
ORF7a43N43YAatTat33B.1.3510.000089
ORF7a43N43delAAT---33B.1.3510.000089
ORF7a43N43NaaTaaC33B.1.360.000438
ORF7a43N43LAATCTC23B.1.617.20.000008
ORF7a43N43LAAtCTt13B.1.617.20.000004
ORF7a43N43delAAT---33B.1.6260.017143
ORF7a43N43SaAtaGt33P.1.10.000953
ORF7a43N43delAAT---33P.1.150.000697
ORF7a43N43delAAT---33Q.80.000495
ORF7a43N43TaAtaCt220.111111
ORF7a43N43delAAT---22A0.000774
ORF7a43N43delAAT---22A.280.005291
ORF7a43N43VAAtGTt12All0
ORF7a43N43VAATGTG12All0
ORF7a43N43IaAtaTt22AY.1020.000053
ORF7a43N43DAatGat22AY.1030.000012
ORF7a43N43SaAtaGt22AY.1030.000012
ORF7a43N43del1aaTaa-22AY.1090.001479
ORF7a43N43delAAT---22AY.1100.000225
ORF7a43N43delAAT---22AY.1140.000462
ORF7a43N43NaaTaaC22AY.1170.000169
ORF7a43N43NaaTaaC22AY.1200.000074
ORF7a43N43DAatGat22AY.1200.000074
ORF7a43N43delAAT---22AY.120.10.000642
ORF7a43N43DAatGat22AY.250.000012
ORF7a43N43YAatTat22AY.290.000032
ORF7a43N43delAAT---22AY.29.10.000441
ORF7a43N43DAatGat22AY.30.00002
ORF7a43N43TaAtaCt22AY.30.00002
ORF7a43N43IaAtaTt22AY.390.000049
ORF7a43N43YAatTat22AY.4.2.10.000298
ORF7a43N43delAAT---22AY.450.000243
ORF7a43N43YAatTat22AY.460.000208
ORF7a43N43delAAT---22AY.610.00021
ORF7a43N43del2aATa--22AY.750.000112
ORF7a43N43delAAT---22AY.90.000135
ORF7a43N43delAAT---22AY.980.000158
ORF7a43N43YAatTat22B.10.000018
ORF7a43N43KaaTaaA22B.1.10.000036
ORF7a43N43KaaTaaA22B.1.1.280.000622
ORF7a43N43delAAT---22B.1.1.3180.000604
ORF7a43N43NaaTaaC22B.1.1.5190.000079
ORF7a43N43SaAtaGt22B.1.1770.000026
ORF7a43N43delAAT---22B.1.177.430.002954
ORF7a43N43delAAT---22B.1.177.860.000367
ORF7a43N43IaAtaTt22B.1.20.000018
ORF7a43N43DAatGat22B.1.20.000018
ORF7a43N43delAAT---22B.1.214.20.001199
ORF7a43N43delAAT---22B.1.258.110.000793
ORF7a43N43NaaTaaC22B.1.258.170.000208
ORF7a43N43delAAT---22B.1.360.000292
ORF7a43N43YAatTat22B.1.4290.000047
ORF7a43N43NaaTaaC22B.1.438.10.000215
ORF7a43N43YAatTat22B.1.5260.000047
ORF7a43N43KaaTaaA22B.1.5760.001813
ORF7a43N43IaATaTA12B.1.5760.000907
ORF7a43N43IaAtaTt12B.1.5760.000907
ORF7a43N43delAAT---22B.1.5960.000174
ORF7a43N43SaAtaGt22B.1.617.10.000258
ORF7a43N43XAaTTaA22B.1.617.20.000008
ORF7a43N43FAAtTTt12B.1.617.20.000004
ORF7a43N43VAATGTG12B.1.617.20.000004
ORF7a43N43FAATTTC12B.1.617.20.000004
ORF7a43N43VAAtGTt12B.1.617.20.000004
ORF7a43N43SaAtaGt22B.1.617.30.00597
ORF7a43N43delAAT---22B.1.617.30.00597
ORF7a43N43KaaTaaG22C.1.20.008511
ORF7a43N43delAAT---22C.36.30.001134
ORF7a43N43NaaTaaC22D.20.00015
ORF7a43N43IaAtaTt22P.10.000032
ORF7a43N43delAAT---11A.10.000282
ORF7a43N43IaAtaTt11A.210.00277
ORF7a43N43delAAT---11A.23.10.000704
ORF7a43N43QAaTCaA11All0
ORF7a43N43MaATaTG11All0
ORF7a43N43del1aaTaa-11AY.1000.000046
ORF7a43N43DAatGat11AY.1020.000027
ORF7a43N43NaaTaaC11AY.1020.000027
ORF7a43N43del2aATa--11AY.1020.000027
ORF7a43N43delAAT---11AY.1080.001103
ORF7a43N43KaaTaaG11AY.1100.000113
ORF7a43N43NaaTaaC11AY.1110.000183
ORF7a43N43delAAT---11AY.1110.000183
ORF7a43N43NaaTaaC11AY.1130.000142
ORF7a43N43delAAT---11AY.1130.000142
ORF7a43N43IaAtaTt11AY.1160.000287
ORF7a43N43delAAT---11AY.1160.000287
ORF7a43N43SaAtaGt11AY.116.10.000311
ORF7a43N43DAatGat11AY.116.10.000311
ORF7a43N43del1aaTaa-11AY.116.10.000311
ORF7a43N43YAatTat11AY.1170.000085
ORF7a43N43YAatTat11AY.1180.000063
ORF7a43N43IaAtaTt11AY.1180.000063
ORF7a43N43delAAT---11AY.120.000316
ORF7a43N43YAatTat11AY.120.10.000321
ORF7a43N43TaAtaCt11AY.1210.000135
ORF7a43N43delAAT---11AY.130.000161
ORF7a43N43NaaTaaC11AY.130.000161
ORF7a43N43delAAT---11AY.160.00038
ORF7a43N43delAAT---11AY.16.10.00047
ORF7a43N43del1aaTaa-11AY.200.000039
ORF7a43N43IaAtaTt11AY.200.000039
ORF7a43N43NaaTaaC11AY.200.000039
ORF7a43N43IaAtaTt11AY.230.00007
ORF7a43N43QAaTCaA11AY.250.000006
ORF7a43N43MaATaTG11AY.250.000006
ORF7a43N43SaAtaGt11AY.260.000028
ORF7a43N43YAaTTaC11AY.260.000028
ORF7a43N43YAatTat11AY.270.000065
ORF7a43N43SaAtaGt11AY.30.00001
ORF7a43N43del1aaTaa-11AY.30.00001
ORF7a43N43del1aaTaa-11AY.3.10.000085
ORF7a43N43delAAT---11AY.300.000396
ORF7a43N43KaaTaaA11AY.330.000067
ORF7a43N43del1aaTaa-11AY.340.000097
ORF7a43N43DAatGat11AY.340.000097
ORF7a43N43DAatGat11AY.34.10.00051
ORF7a43N43DAatGat11AY.370.000316
ORF7a43N43DAatGat11AY.390.000025
ORF7a43N43TaAtaCt11AY.390.000025
ORF7a43N43SaAtaGt11AY.390.000025
ORF7a43N43DAatGat11AY.4.20.000022
ORF7a43N43IaAtaTt11AY.4.20.000022
ORF7a43N43KaaTaaG11AY.420.00004
ORF7a43N43YAatTat11AY.420.00004
ORF7a43N43del2aATa--11AY.420.00004
ORF7a43N43TaAtaCt11AY.440.000006
ORF7a43N43KaaTaaG11AY.450.000122
ORF7a43N43delAAT---11AY.460.000104
ORF7a43N43NaaTaaC11AY.460.000104
ORF7a43N43SaAtaGt11AY.46.20.000635
ORF7a43N43DAatGat11AY.46.40.000165
ORF7a43N43NaaTaaC11AY.46.40.000165
ORF7a43N43del1aaTaa-11AY.470.000031
ORF7a43N43IaAtaTt11AY.470.000031
ORF7a43N43NaaTaaC11AY.470.000031
ORF7a43N43DAatGat11AY.470.000031
ORF7a43N43TaAtaCt11AY.50.000021
ORF7a43N43del2AAt--t11AY.50.000021
ORF7a43N43SaATaGC11AY.5.40.000277
ORF7a43N43DAatGat11AY.5.40.000277
ORF7a43N43delAAT---11AY.530.000288
ORF7a43N43del1aaTaa-11AY.530.000288
ORF7a43N43KaaTaaG11AY.540.000095
ORF7a43N43NaaTaaC11AY.60.000041
ORF7a43N43delAAT---11AY.60.000041
ORF7a43N43NaaTaaC11AY.610.000105
ORF7a43N43delAAT---11AY.660.00107
ORF7a43N43delAAT---11AY.680.000274
ORF7a43N43delAAT---11AY.730.000665
ORF7a43N43delAAT---11AY.740.000116
ORF7a43N43NaaTaaC11AY.740.000116
ORF7a43N43del1Aat-at11AY.750.000056
ORF7a43N43delAAT---11AY.760.004831
ORF7a43N43delAAT---11AY.790.001211
ORF7a43N43del1Aat-at11AY.790.001211
ORF7a43N43delAAT---11AY.800.001129
ORF7a43N43delAAT---11AY.850.000427
ORF7a43N43YAatTat11AY.880.000884
ORF7a43N43NaaTaaC11AY.90.000068
ORF7a43N43TaAtaCt11AY.9.10.000084
ORF7a43N43delAAT---11AY.9.10.000084
ORF7a43N43YAatTat11AY.9.20.000037
ORF7a43N43delAAT---11AY.9.20.000037
ORF7a43N43DAatGat11AY.9.20.000037
ORF7a43N43IaAtaTt11AY.920.000287
ORF7a43N43del2aATa--11AY.920.000287
ORF7a43N43delAAT---11AY.920.000287
ORF7a43N43delAAT---11AY.940.000443
ORF7a43N43DAatGat11AY.980.000079
ORF7a43N43TaAtaCt11AY.980.000079
ORF7a43N43TaAtaCt11AY.98.10.000048
ORF7a43N43NaaTaaC11AY.98.10.000048
ORF7a43N43delAAT---11AY.99.20.000092
ORF7a43N43delAAT---11B0.000128
ORF7a43N43IaAtaTt11B0.000128
ORF7a43N43DAatGat11B.10.000009
ORF7a43N43del1Aat-at11B.10.000009
ORF7a43N43TaAtaCt11B.10.000009
ORF7a43N43HAatCat11B.10.000009
ORF7a43N43XAaTTaA11B.1.10.000018
ORF7a43N43DAatGat11B.1.10.000018
ORF7a43N43del1Aat-at11B.1.10.000018
ORF7a43N43SaAtaGt11B.1.10.000018
ORF7a43N43IaAtaTt11B.1.1.1410.002012
ORF7a43N43delAAT---11B.1.1.2070.001182
ORF7a43N43NaaTaaC11B.1.1.2140.000055
ORF7a43N43KaaTaaA11B.1.1.2140.000055
ORF7a43N43del2AAt--t11B.1.1.2220.000204
ORF7a43N43delAAT---11B.1.1.2770.000759
ORF7a43N43YAatTat11B.1.1.2840.000107
ORF7a43N43del1aaTaa-11B.1.1.2840.000107
ORF7a43N43YAatTat11B.1.1.2980.000862
ORF7a43N43del2aATa--11B.1.1.3040.002809
ORF7a43N43NaaTaaC11B.1.1.3120.001912
ORF7a43N43NaaTaaC11B.1.1.3150.008475
ORF7a43N43delAAT---11B.1.1.330.000421
ORF7a43N43YAatTat11B.1.1.3590.027778
ORF7a43N43TaAtaCt11B.1.1.4160.000905
ORF7a43N43IaAtaTt11B.1.1.4280.009434
ORF7a43N43delAAT---11B.1.1.5190.00004
ORF7a43N43delAAT---11B.1.1.5220.017241
ORF7a43N43HAaTCaC11B.1.1.70.000001
ORF7a43N43del2aATa--11B.1.1.70.000001
ORF7a43N43delAAT---11B.1.1150.021739
ORF7a43N43NaaTaaC11B.1.1270.002198
ORF7a43N43delAAT---11B.1.1400.018868
ORF7a43N43TaAtaCt11B.1.1770.000013
ORF7a43N43del2aATa--11B.1.1770.000013
ORF7a43N43YAatTat11B.1.1770.000013
ORF7a43N43KaaTaaG11B.1.1770.000013
ORF7a43N43del1aaTaa-11B.1.1770.000013
ORF7a43N43NaaTaaC11B.1.177.210.000076
ORF7a43N43YAatTat11B.1.177.210.000076
ORF7a43N43SaAtaGt11B.1.177.440.000519
ORF7a43N43del1aaTaa-11B.1.177.500.004695
ORF7a43N43delAAT---11B.1.177.620.001192
ORF7a43N43SaATaGC11B.1.177.630.002703
ORF7a43N43KaaTaaA11B.1.177.70.000165
ORF7a43N43delAAT---11B.1.177.810.000189
ORF7a43N43NaaTaaC11B.1.177.820.000477
ORF7a43N43delAAT---11B.1.177.830.001481
ORF7a43N43YAatTat11B.1.20.000009
ORF7a43N43KaaTaaG11B.1.20.000009
ORF7a43N43IaAtaTt11B.1.214.30.007143
ORF7a43N43DAatGat11B.1.220.001318
ORF7a43N43delAAT---11B.1.2210.000071
ORF7a43N43DAatGat11B.1.2320.000537
ORF7a43N43delAAT---11B.1.2400.000216
ORF7a43N43SaAtaGt11B.1.2580.000067
ORF7a43N43HAatCat11B.1.2580.000067
ORF7a43N43YAatTat11B.1.2580.000067
ORF7a43N43delAAT---11B.1.258.170.000104
ORF7a43N43SaAtaGt11B.1.2790.000514
ORF7a43N43TaAtaCt11B.1.3110.000275
ORF7a43N43SaAtaGt11B.1.3200.001245
ORF7a43N43NaaTaaC11B.1.3490.000715
ORF7a43N43delAAT---11B.1.351.20.000303
ORF7a43N43IaAtaTt11B.1.360.000146
ORF7a43N43KaaTaaA11B.1.360.000146
ORF7a43N43YAatTat11B.1.360.000146
ORF7a43N43NaaTaaC11B.1.36.100.004785
ORF7a43N43YAatTat11B.1.36.210.00216
ORF7a43N43YAatTat11B.1.36.290.000517
ORF7a43N43SaAtaGt11B.1.36.80.001
ORF7a43N43NaaTaaC11B.1.3690.000285
ORF7a43N43delAAT---11B.1.3900.010638
ORF7a43N43KaaTaaG11B.1.4080.00369
ORF7a43N43TaAtaCt11B.1.4270.00005
ORF7a43N43delAAT---11B.1.4270.00005
ORF7a43N43KaaTaaG11B.1.4270.00005
ORF7a43N43delAAT---11B.1.438.10.000107
ORF7a43N43delAAT---11B.1.4590.004082
ORF7a43N43delAAT---11B.1.466.20.000391
ORF7a43N43delAAT---11B.1.4680.005714
ORF7a43N43delAAT---11B.1.4700.001404
ORF7a43N43DAatGat11B.1.5250.000113
ORF7a43N43HAatCat11B.1.5250.000113
ORF7a43N43SaAtaGt11B.1.5260.000024
ORF7a43N43IaAtaTt11B.1.5260.000024
ORF7a43N43NaaTaaC11B.1.5260.000024
ORF7a43N43delAAT---11B.1.5350.028571
ORF7a43N43KaaTaaG11B.1.5450.014493
ORF7a43N43TaAtaCt11B.1.5750.000303
ORF7a43N43FAAtTTt11B.1.5760.000907
ORF7a43N43LAATTTA11B.1.5760.000907
ORF7a43N43YAatTat11B.1.5760.000907
ORF7a43N43XAaTTaA11B.1.5760.000907
ORF7a43N43delAAT---11B.1.5820.000491
ORF7a43N43KaaTaaA11B.1.5960.000087
ORF7a43N43TaAtaCt11B.1.5960.000087
ORF7a43N43NaaTaaC11B.1.5960.000087
ORF7a43N43DAatGat11B.1.5960.000087
ORF7a43N43NaaTaaC11B.1.617.10.000129
ORF7a43N43delAAT---11B.1.617.10.000129
ORF7a43N43YAatTat11B.1.6200.000946
ORF7a43N43delAAT---11B.1.6200.000946
ORF7a43N43del2aATa--11B.1.6210.000089
ORF7a43N43delAAT---11B.1.6360.006711
ORF7a43N43YAatTat11B.1.6370.000073
ORF7a43N43delAAT---11B.1.6380.052632
ORF7a43N43delAAT---11B.1.9.10.032258
ORF7a43N43SaAtaGt11B.1.930.000934
ORF7a43N43delAAT---11B.550.00295
ORF7a43N43DAatGat11B.60.00091
ORF7a43N43DAatGat11C.370.000116
ORF7a43N43delAAT---11K.30.006173
ORF7a43N43NaaTaaC11N.40.004255
ORF7a43N43del1Aat-at11P.10.000016
ORF7a43N43SaAtaGt11P.10.000016
ORF7a43N43delAAT---11P.1.10.000318
ORF7a43N43IaAtaTt11P.1.120.000484
ORF7a43N43del1aaTaa-11P.1.150.000232
ORF7a43N43delAAT---11P.1.160.000374
ORF7a43N43delAAT---11P.1.30.034483
ORF7a43N43delAAT---11P.20.000187
ORF7a43N43delAAT---11Q.70.001111
ORF7a43N43SaAtaGt11Q.80.000165
ORF7a43N43del2AATG--11R.10.00009
ORF7a43N43IaAtaTt11R.10.00009