CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 40 & Codon = tGc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a40Y40CnonsyntActGc88720.81818227511-27513

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a40Y40CtActGc7288All0.000014
ORF7a40Y40CtActGc1830B.1.1.70.000016
ORF7a40Y40CtActGc1111AY.40.000017
ORF7a40Y40CtActGc79B.1.617.20.000026
ORF7a40Y40CtActGc66AY.260.00017
ORF7a40Y40CtActGc33AY.30.00003
ORF7a40Y40CtActGc33P.1.10.000953
ORF7a40Y40CtActGc12B.1.1600.000031
ORF7a40Y40CtActGc22B.1.20.000018
ORF7a40Y40CtActGc22B.1.6210.000177
ORF7a40Y40CtActGc11AY.100.00053
ORF7a40Y40CtActGc11AY.1030.000006
ORF7a40Y40CtActGc11AY.1180.000063
ORF7a40Y40CtActGc11AY.1200.000037
ORF7a40Y40CtActGc11AY.300.000396
ORF7a40Y40CtActGc11AY.390.000025
ORF7a40Y40CtActGc11AY.430.000004
ORF7a40Y40CtActGc11AY.450.000122
ORF7a40Y40CtActGc11AY.5.40.000277
ORF7a40Y40CtActGc11AY.530.000288
ORF7a40Y40CtActGc11B.1.177.70.000165
ORF7a40Y40CtActGc11B.1.3510.00003
ORF7a40Y40CtActGc11B.1.36.80.001
ORF7a40Y40CtActGc11B.1.4090.000781
ORF7a40Y40CtActGc11B.1.4270.00005
ORF7a40Y40CtActGc11B.1.5670.003333
ORF7a40Y40CtActGc11B.1.5960.000087
ORF7a40Y40CtActGc11P.10.000016
ORF7a40Y40CtActGc11P.1.160.000374