CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 118

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a118R118GnonsynAgaGga1552415524127745-27747
ORF7a118R118deldelAGA---25542554127745-27747
ORF7a118R118InonsynaGaaTa108510840.99907827745-27747
ORF7a118R118InonsynaGAaTT108510.00092165927745-27747
ORF7a118R118KnonsynaGaaAa6076030.9934127745-27747
ORF7a118R118KnonsynaGAaAG60740.0065897927745-27747
ORF7a118R118XnonsynAgaTga482482127745-27747
ORF7a118R118SnonsynagAagC3652810.76986327745-27747
ORF7a118R118SnonsynagAagT365840.23013727745-27747
ORF7a118R118TnonsynaGaaCa1341330.99253727745-27747
ORF7a118R118TnonsynaGAaCT13410.0074626927745-27747
ORF7a118R118del1delaGaa-a116970.83620727745-27747
ORF7a118R118del1delagAag-116120.10344827745-27747
ORF7a118R118del1delAga-ga11660.051724127745-27747
ORF7a118R118del1delAgA-gG11610.0086206927745-27747
ORF7a118R118RsynagAagG101640.63366327745-27747
ORF7a118R118RsynAgaCga101350.34653527745-27747
ORF7a118R118RsynAgACgC10110.0099009927745-27747
ORF7a118R118RsynAgACgG10110.0099009927745-27747
ORF7a118R118del2delAGa--a61490.80327927745-27747
ORF7a118R118del2delaGAa--6160.098360727745-27747
ORF7a118R118del2delAGA--G6140.065573827745-27747
ORF7a118R118del2delAGA--N6120.032786927745-27747
ORF7a118R118EnonsynAGaGAa44127745-27747
ORF7a118R118QnonsynAGACAG420.527745-27747
ORF7a118R118QnonsynAGaCAa420.527745-27747
ORF7a118R118NnonsynaGAaAC22127745-27747
ORF7a118R118LnonsynAGaCTa210.527745-27747
ORF7a118R118AnonsynAGaGCa210.527745-27747
ORF7a118R118AnonsynAGAGCT210.527745-27747
ORF7a118R118LnonsynAGACTC210.527745-27747
ORF7a118R118WnonsynAgATgG11127745-27747
ORF7a118R118DnonsynAGAGAC11127745-27747
ORF7a118R118MnonsynaGAaTG11127745-27747
ORF7a118R118HnonsynAGACAC11127745-27747

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a118R118GAgaGga1552415524All0.002969
ORF7a118R118GAgaGga73617361B.1.617.20.027717
ORF7a118R118GAgaGga51845184AY.430.022968
ORF7a118R118delAGA---25542554All0.000488
ORF7a118R118GAgaGga12141214B.1.1.70.001087
ORF7a118R118IaGaaTa10841085All0.000207
ORF7a118R118IaGAaTT11085All0
ORF7a118R118delAGA---10691069B.1.1.70.000957
ORF7a118R118KaGaaAa603607All0.000115
ORF7a118R118KaGAaAG4607All0.000001
ORF7a118R118XAgaTga482482All0.000092
ORF7a118R118XAgaTga427427AY.40.000665
ORF7a118R118delAGA---390390AY.40.000607
ORF7a118R118SagAagC281365All0.000054
ORF7a118R118SagAagT84365All0.000016
ORF7a118R118GAgaGga315315AY.440.001917
ORF7a118R118GAgaGga240240AY.390.005931
ORF7a118R118SagAagC236236AY.1030.001465
ORF7a118R118KaGaaAa226226AY.1020.005992
ORF7a118R118IaGaaTa209210B.1.1.70.000187
ORF7a118R118IaGAaTT1210B.1.1.70.000001
ORF7a118R118GAgaGga199199AY.40.00031
ORF7a118R118GAgaGga183183AY.1020.004852
ORF7a118R118KaGaaAa172173B.1.617.20.000648
ORF7a118R118KaGAaAG1173B.1.617.20.000004
ORF7a118R118TaGaaCa133134All0.000025
ORF7a118R118TaGAaCT1134All0
ORF7a118R118IaGaaTa129129B.1.1.500.087576
ORF7a118R118IaGaaTa126126AY.40.000196
ORF7a118R118del1aGaa-a97116All0.000019
ORF7a118R118del1agAag-12116All0.000002
ORF7a118R118del1Aga-ga6116All0.000001
ORF7a118R118del1AgA-gG1116All0
ORF7a118R118RagAagG64101All0.000012
ORF7a118R118RAgaCga35101All0.000007
ORF7a118R118RAgACgC1101All0
ORF7a118R118RAgACgG1101All0
ORF7a118R118IaGaaTa9494AY.260.002661
ORF7a118R118delAGA---9393AY.330.00621
ORF7a118R118GAgaGga9292AY.460.009575
ORF7a118R118delAGA---7474AY.250.000445
ORF7a118R118IaGaaTa7474AY.250.000445
ORF7a118R118delAGA---7373AY.30.000726
ORF7a118R118delAGA---6464AY.290.00101
ORF7a118R118TaGaaCa6464B.1.1.70.000057
ORF7a118R118del2AGa--a4961All0.000009
ORF7a118R118del2aGAa--661All0.000001
ORF7a118R118del2AGA--G461All0.000001
ORF7a118R118del2AGA--N261All0
ORF7a118R118GAgaGga5959AY.1190.002083
ORF7a118R118delAGA---5656AY.460.005828
ORF7a118R118GAgaGga5555AY.5.30.018556
ORF7a118R118delAGA---4949B.1.617.20.000185
ORF7a118R118SagAagT4047B.1.1.70.000036
ORF7a118R118SagAagC747B.1.1.70.000006
ORF7a118R118GAgaGga4646AY.320.024494
ORF7a118R118GAgaGga4242AY.330.002805
ORF7a118R118GAgaGga4141AY.1030.000255
ORF7a118R118delAGA---4040AY.1030.000248
ORF7a118R118IaGaaTa4040B.10.000366
ORF7a118R118delAGA---3939AY.440.000237
ORF7a118R118GAgaGga3939AY.5.40.010791
ORF7a118R118TaGaaCa3838B.1.177.810.007194
ORF7a118R118IaGaaTa3838B.1.617.20.000143
ORF7a118R118IaGaaTa3636AY.1020.000955
ORF7a118R118GAgaGga3636AY.1110.006593
ORF7a118R118delAGA---3535AY.420.001408
ORF7a118R118KaGaaAa3535B.1.1.70.000031
ORF7a118R118delAGA---3434P.10.000536
ORF7a118R118GAgaGga3333AY.46.60.002383
ORF7a118R118delAGA---3333AY.740.003816
ORF7a118R118delAGA---3333B.1.20.000291
ORF7a118R118del1aGaa-a3232AY.1020.000848
ORF7a118R118IaGaaTa3131AY.430.000137
ORF7a118R118delAGA---3030AY.430.000133
ORF7a118R118KaGaaAa2828AY.1050.018006
ORF7a118R118del1aGaa-a2425B.1.1.70.000021
ORF7a118R118del1agAag-125B.1.1.70.000001
ORF7a118R118del1aGaa-a2525B.1.160.240.110619
ORF7a118R118delAGA---2323AY.260.000651
ORF7a118R118IaGaaTa2323B.1.5880.020928
ORF7a118R118IaGaaTa2222AY.1030.000137
ORF7a118R118delAGA---2121AY.530.006038
ORF7a118R118IaGaaTa2121B.1.10.000381
ORF7a118R118SagAagC2121B.1.177.650.013972
ORF7a118R118del2AGa--a1820B.1.1.70.000016
ORF7a118R118del2aGAa--220B.1.1.70.000002
ORF7a118R118GAgaGga1919AY.1060.006363
ORF7a118R118KaGaaAa1919AY.440.000116
ORF7a118R118IaGaaTa1919B.1.438.10.002038
ORF7a118R118IaGaaTa1818B.1.20.000158
ORF7a118R118RAgaCga918B.1.617.20.000034
ORF7a118R118RagAagG918B.1.617.20.000034
ORF7a118R118GAgaGga1717AY.1170.001437
ORF7a118R118delAGA---1717B.1.10.000308
ORF7a118R118GAgaGga1616AY.410.004703
ORF7a118R118GAgaGga1616AY.980.001264
ORF7a118R118IaGaaTa1515AE.40.652174
ORF7a118R118GAgaGga1515AY.770.016911
ORF7a118R118GAgaGga1414AY.1210.001894
ORF7a118R118KaGaaAa1314AY.430.000058
ORF7a118R118KaGAaAG114AY.430.000004
ORF7a118R118GAgaGga1414AY.50.000289
ORF7a118R118delAGA---1414B.1.1.370.0027
ORF7a118R118delAGA---1414B.1.5260.000329
ORF7a118R118GAgaGga1313AY.840.005687
ORF7a118R118IaGaaTa1212AY.1100.001352
ORF7a118R118GAgaGga1212AY.230.000837
ORF7a118R118delAGA---1212AY.390.000297
ORF7a118R118del2AGa--a1212AY.420.000483
ORF7a118R118GAgaGga1212AY.420.000483
ORF7a118R118GAgaGga1212AY.990.012592
ORF7a118R118delAGA---1212B.10.00011
ORF7a118R118delAGA---1212B.1.1770.000158
ORF7a118R118delAGA---1111B.1.1.2140.00061
ORF7a118R118delAGA---1010AY.1020.000265
ORF7a118R118IaGaaTa1010AY.370.003161
ORF7a118R118GAgaGga1010AY.450.001217
ORF7a118R118GAgaGga1010AY.46.10.010267
ORF7a118R118delAGA---1010AY.60.000411
ORF7a118R118KaGaaAa1010AY.640.005952
ORF7a118R118GAgaGga1010AY.920.002873
ORF7a118R118XAgaTga1010B.1.1770.000132
ORF7a118R118TaGaaCa1010B.1.20.000088
ORF7a118R118delAGA---1010B.1.2340.001319
ORF7a118R118delAGA---99AY.1130.001282
ORF7a118R118delAGA---99AY.1210.001218
ORF7a118R118RagAagG89AY.40.000012
ORF7a118R118RAgaCga19AY.40.000002
ORF7a118R118IaGaaTa99AY.440.000055
ORF7a118R118KaGaaAa99AY.460.000937
ORF7a118R118GAgaGga99AY.590.004767
ORF7a118R118delAGA---99B.1.1.5190.000357
ORF7a118R118XAgaTga99B.1.1.70.000008
ORF7a118R118RAgaCga99B.1.177.160.00598
ORF7a118R118IaGaaTa99B.1.2210.000639
ORF7a118R118XAgaTga99B.1.617.20.000034
ORF7a118R118del1aGaa-a89B.1.617.20.00003
ORF7a118R118del1agAag-19B.1.617.20.000004
ORF7a118R118delAGA---88AY.910.005844
ORF7a118R118GAgaGga77AY.1160.002007
ORF7a118R118delAGA---77AY.1200.00026
ORF7a118R118KaGaaAa77AY.40.000011
ORF7a118R118IaGaaTa77AY.990.007345
ORF7a118R118delAGA---77B.1.258.170.000728
ORF7a118R118delAGA---77B.1.6280.002467
ORF7a118R118RagAagG360.166667
ORF7a118R118RAgaCga160.055556
ORF7a118R118RAgACgC160.055556
ORF7a118R118RAgACgG160.055556
ORF7a118R118GAgaGga66AY.1140.001387
ORF7a118R118delAGA---66AY.1190.000212
ORF7a118R118SagAagT66AY.200.000233
ORF7a118R118KaGaaAa66AY.250.000036
ORF7a118R118SagAagT36AY.40.000005
ORF7a118R118SagAagC36AY.40.000005
ORF7a118R118SagAagT66AY.430.000027
ORF7a118R118XAgaTga66AY.430.000027
ORF7a118R118GAgaGga66AY.470.000187
ORF7a118R118IaGaaTa66AY.9.10.000502
ORF7a118R118KaGaaAa66B.10.000055
ORF7a118R118KaGaaAa66B.1.160.240.026549
ORF7a118R118KaGaaAa66B.1.3510.000178
ORF7a118R118delAGA---66B.1.3510.000178
ORF7a118R118delAGA---66B.1.4290.000141
ORF7a118R118TaGaaCa66B.1.617.20.000023
ORF7a118R118delAGA---66D.20.00045
ORF7a118R118KaGaaAa66P.10.000095
ORF7a118R118GAgaGga55AY.1000.00023
ORF7a118R118GAgaGga55AY.1180.000313
ORF7a118R118RagAagG45AY.30.00004
ORF7a118R118RAgaCga15AY.30.00001
ORF7a118R118GAgaGga55AY.34.10.00255
ORF7a118R118delAGA---55AY.4.20.000108
ORF7a118R118IaGaaTa55AY.420.000201
ORF7a118R118GAgaGga55AY.670.002321
ORF7a118R118GAgaGga55AY.890.02451
ORF7a118R118GAgaGga55AY.950.003805
ORF7a118R118delAGA---55B.1.1.3180.001509
ORF7a118R118GAgaGga55B.1.1600.000156
ORF7a118R118del2AGa--a55B.1.2340.00066
ORF7a118R118IaGaaTa55B.1.360.00073
ORF7a118R118IaGaaTa55B.1.4290.000118
ORF7a118R118delAGA---55B.1.6210.000443
ORF7a118R118IaGaaTa55P.10.000079
ORF7a118R118delAGA---55P.20.000933
ORF7a118R118RagAagG44A.20.002647
ORF7a118R118EAGaGAa44All0.000001
ORF7a118R118QAGaCAa24All0
ORF7a118R118QAGACAG24All0
ORF7a118R118GAgaGga44AY.100.00212
ORF7a118R118GAgaGga44AY.1130.00057
ORF7a118R118delAGA---44AY.1140.000924
ORF7a118R118RagAagG44AY.1190.000141
ORF7a118R118IaGaaTa44AY.1200.000149
ORF7a118R118IaGaaTa44AY.1210.000541
ORF7a118R118delAGA---44AY.200.000155
ORF7a118R118GAgaGga44AY.250.000024
ORF7a118R118GAgaGga44AY.30.00004
ORF7a118R118IaGaaTa44AY.30.00004
ORF7a118R118GAgaGga44AY.4.30.003367
ORF7a118R118delAGA---44AY.4.50.00043
ORF7a118R118KaGaaAa44AY.420.000161
ORF7a118R118del2AGA--G34AY.440.000018
ORF7a118R118RAgaCga34AY.440.000018
ORF7a118R118del2AGA--N14AY.440.000006
ORF7a118R118RagAagG14AY.440.000006
ORF7a118R118GAgaGga44AY.46.20.002541
ORF7a118R118GAgaGga44AY.530.00115
ORF7a118R118GAgaGga44AY.580.00363
ORF7a118R118GAgaGga44AY.640.002381
ORF7a118R118GAgaGga44AY.680.001095
ORF7a118R118IaGaaTa44AY.750.000224
ORF7a118R118delAGA---44AY.790.004843
ORF7a118R118GAgaGga44AY.860.00332
ORF7a118R118GAgaGga44AY.90.00027
ORF7a118R118KaGaaAa44AY.980.000316
ORF7a118R118GAgaGga44B.10.000037
ORF7a118R118SagAagT44B.10.000037
ORF7a118R118RagAagG24B.1.10.000036
ORF7a118R118RAgaCga24B.1.10.000036
ORF7a118R118delAGA---44B.1.1.2840.00043
ORF7a118R118RagAagG34B.1.1.70.000003
ORF7a118R118RAgaCga14B.1.1.70.000001
ORF7a118R118KaGaaAa44B.1.1770.000053
ORF7a118R118IaGaaTa44B.1.1770.000053
ORF7a118R118IaGaaTa44B.1.177.660.166667
ORF7a118R118delAGA---44B.1.177.70.000659
ORF7a118R118IaGaaTa44B.1.5260.000094
ORF7a118R118IaGaaTa44B.1.5820.001963
ORF7a118R118IaGaaTa44B.1.617.10.000516
ORF7a118R118SagAagT44B.1.617.20.000015
ORF7a118R118IaGaaTa44C.370.000464
ORF7a118R118delAGA---44N.70.117647
ORF7a118R118delAGA---44P.1.140.000191
ORF7a118R118delAGA---44R.10.00036
ORF7a118R118RagAagG33AY.1020.00008
ORF7a118R118KaGaaAa33AY.1200.000112
ORF7a118R118GAgaGga33AY.140.000264
ORF7a118R118GAgaGga33AY.200.000117
ORF7a118R118delAGA---33AY.270.000194
ORF7a118R118del1agAag-23AY.440.000012
ORF7a118R118del1aGaa-a13AY.440.000006
ORF7a118R118RagAagG33AY.50.000062
ORF7a118R118delAGA---33AY.7.20.001678
ORF7a118R118GAgaGga33AY.720.004082
ORF7a118R118TaGaaCa33B.10.000027
ORF7a118R118GAgaGga33B.1.10.000054
ORF7a118R118GAgaGga33B.1.1.1710.011029
ORF7a118R118del1Aga-ga33B.1.1.2140.000166
ORF7a118R118delAGA---33B.1.1.580.016129
ORF7a118R118IaGaaTa33B.1.177.30.022901
ORF7a118R118KaGaaAa33B.1.20.000026
ORF7a118R118delAGA---33B.1.2580.0002
ORF7a118R118GAgaGga33B.1.3510.000089
ORF7a118R118delAGA---33B.1.351.20.000908
ORF7a118R118delAGA---33B.1.360.000438
ORF7a118R118delAGA---33B.1.3890.003006
ORF7a118R118IaGaaTa33B.1.4270.000151
ORF7a118R118SagAagT33B.1.4290.000071
ORF7a118R118delAGA---33B.1.5750.00091
ORF7a118R118IaGaaTa33B.1.6210.000266
ORF7a118R118delAGA---33B.1.6260.017143
ORF7a118R118delAGA---33C.370.000348
ORF7a118R118delAGA---33P.1.150.000697
ORF7a118R118IaGaaTa33Q.30.000435
ORF7a118R118delAGA---33Q.80.000495
ORF7a118R118SagAagC33R.10.00027
ORF7a118R118KaGaaAa120.055556
ORF7a118R118KaGAaAG120.055556
ORF7a118R118QAGaCAa120.055556
ORF7a118R118QAGACAG120.055556
ORF7a118R118NaGAaAC22All0
ORF7a118R118LAGACTC12All0
ORF7a118R118AAGaGCa12All0
ORF7a118R118AAGAGCT12All0
ORF7a118R118LAGaCTa12All0
ORF7a118R118delAGA---22AY.1000.000092
ORF7a118R118XAgaTga22AY.1020.000053
ORF7a118R118SagAagT22AY.1020.000053
ORF7a118R118GAgaGga22AY.1050.001286
ORF7a118R118delAGA---22AY.1080.002205
ORF7a118R118GAgaGga22AY.1080.002205
ORF7a118R118GAgaGga22AY.1100.000225
ORF7a118R118SagAagT22AY.1110.000366
ORF7a118R118delAGA---22AY.1160.000574
ORF7a118R118delAGA---22AY.1170.000169
ORF7a118R118KaGaaAa22AY.1170.000169
ORF7a118R118IaGaaTa22AY.140.000176
ORF7a118R118GAgaGga22AY.190.002281
ORF7a118R118delAGA---22AY.230.000139
ORF7a118R118SagAagT22AY.250.000012
ORF7a118R118GAgaGga22AY.260.000057
ORF7a118R118del1aGaa-a22AY.290.000032
ORF7a118R118GAgaGga22AY.29.10.000441
ORF7a118R118RAgaCga22AY.330.000134
ORF7a118R118KaGaaAa22AY.390.000049
ORF7a118R118TaGaaCa22AY.39.10.000079
ORF7a118R118del2AGa--a22AY.40.000003
ORF7a118R118IaGaaTa22AY.4.20.000043
ORF7a118R118XAgaTga22AY.4.40.000818
ORF7a118R118SagAagT22AY.440.000012
ORF7a118R118del1aGaa-a22AY.460.000208
ORF7a118R118IaGaaTa22AY.46.40.000329
ORF7a118R118SagAagC22AY.46.40.000329
ORF7a118R118delAGA---22AY.46.50.000397
ORF7a118R118delAGA---22AY.470.000062
ORF7a118R118IaGaaTa22AY.50.000041
ORF7a118R118GAgaGga22AY.520.001629
ORF7a118R118GAgaGga22AY.560.00321
ORF7a118R118IaGaaTa22AY.610.00021
ORF7a118R118GAgaGga22AY.610.00021
ORF7a118R118GAgaGga22AY.870.001665
ORF7a118R118delAGA---22AY.90.000135
ORF7a118R118GAgaGga22AY.98.10.000097
ORF7a118R118SagAagT22AY.98.10.000097
ORF7a118R118RagAagG22B.10.000018
ORF7a118R118del2aGAa--22B.1.1.10.000653
ORF7a118R118SagAagC22B.1.1.1530.002191
ORF7a118R118delAGA---22B.1.1.1550.142857
ORF7a118R118delAGA---22B.1.1.330.000842
ORF7a118R118GAgaGga22B.1.1.5190.000079
ORF7a118R118IaGaaTa22B.1.1.5190.000079
ORF7a118R118AAGAGCT12B.1.1.70.000001
ORF7a118R118AAGaGCa12B.1.1.70.000001
ORF7a118R118IaGaaTa22B.1.1600.000062
ORF7a118R118delAGA---22B.1.1600.000062
ORF7a118R118RAgaCga22B.1.1770.000026
ORF7a118R118del1aGaa-a22B.1.1770.000026
ORF7a118R118SagAagC22B.1.1770.000026
ORF7a118R118IaGaaTa22B.1.177.230.006472
ORF7a118R118delAGA---22B.1.177.570.000562
ORF7a118R118delAGA---22B.1.177.600.000437
ORF7a118R118delAGA---22B.1.177.860.000367
ORF7a118R118del1agAag-22B.1.20.000018
ORF7a118R118RagAagG22B.1.20.000018
ORF7a118R118delAGA---22B.1.2210.000142
ORF7a118R118IaGaaTa22B.1.2320.001075
ORF7a118R118KaGaaAa22B.1.2340.000264
ORF7a118R118delAGA---22B.1.2430.000139
ORF7a118R118delAGA---22B.1.258.110.000793
ORF7a118R118delAGA---22B.1.3110.000549
ORF7a118R118IaGaaTa22B.1.3510.000059
ORF7a118R118RagAagG22B.1.360.000292
ORF7a118R118XAgaTga22B.1.4040.002604
ORF7a118R118delAGA---22B.1.4270.000101
ORF7a118R118RagAagG22B.1.438.10.000215
ORF7a118R118IaGaaTa22B.1.4560.006536
ORF7a118R118GAgaGga22B.1.466.20.000782
ORF7a118R118delAGA---22B.1.5250.000226
ORF7a118R118IaGaaTa22B.1.5650.001621
ORF7a118R118delAGA---22B.1.5960.000174
ORF7a118R118delAGA---22B.1.6120.005305
ORF7a118R118delAGA---22B.1.621.10.001012
ORF7a118R118del1agAag-22B.1.6270.00404
ORF7a118R118SagAagT22P.10.000032
ORF7a118R118GAgaGga22P.1.140.000096
ORF7a118R118RagAagG22P.30.00319
ORF7a118R118NaGAaAC110.055556
ORF7a118R118HAGACAC110.055556
ORF7a118R118SagAagC110.055556
ORF7a118R118delAGA---11A0.000387
ORF7a118R118delAGA---11A.10.000282
ORF7a118R118delAGA---11A.2.20.001689
ORF7a118R118GAgaGga11A.2.40.003367
ORF7a118R118IaGaaTa11A.2.5.20.001572
ORF7a118R118delAGA---11A.230.010526
ORF7a118R118GAgaGga11A.23.10.000704
ORF7a118R118delAGA---11AE.80.000489
ORF7a118R118delAGA---11AH.30.003802
ORF7a118R118WAgATgG11All0
ORF7a118R118HAGACAC11All0
ORF7a118R118MaGAaTG11All0
ORF7a118R118DAGAGAC11All0
ORF7a118R118delAGA---11AU.10.001266
ORF7a118R118GAgaGga11AY.10.000396
ORF7a118R118del1agAag-11AY.1030.000006
ORF7a118R118KaGaaAa11AY.1030.000006
ORF7a118R118RagAagG11AY.1030.000006
ORF7a118R118QAGACAG11AY.1030.000006
ORF7a118R118del2AGa--a11AY.1030.000006
ORF7a118R118GAgaGga11AY.1040.001984
ORF7a118R118GAgaGga11AY.1090.00074
ORF7a118R118del2AGa--a11AY.1130.000142
ORF7a118R118KaGaaAa11AY.1130.000142
ORF7a118R118delAGA---11AY.1180.000063
ORF7a118R118del1agAag-11AY.1190.000035
ORF7a118R118del2AGa--a11AY.1190.000035
ORF7a118R118del1aGaa-a11AY.1200.000037
ORF7a118R118GAgaGga11AY.1200.000037
ORF7a118R118TaGaaCa11AY.1200.000037
ORF7a118R118delAGA---11AY.120.10.000321
ORF7a118R118GAgaGga11AY.120.10.000321
ORF7a118R118EAGaGAa11AY.120.10.000321
ORF7a118R118delAGA---11AY.120.2.10.000498
ORF7a118R118del1Aga-ga11AY.1210.000135
ORF7a118R118RagAagG11AY.160.00038
ORF7a118R118GAgaGga11AY.16.10.00047
ORF7a118R118KaGaaAa11AY.190.00114
ORF7a118R118TaGaaCa11AY.200.000039
ORF7a118R118IaGaaTa11AY.200.000039
ORF7a118R118GAgaGga11AY.210.001898
ORF7a118R118delAGA---11AY.240.000431
ORF7a118R118del2AGa--a11AY.250.000006
ORF7a118R118del1Aga-ga11AY.250.000006
ORF7a118R118RagAagG11AY.250.000006
ORF7a118R118IaGaaTa11AY.270.000065
ORF7a118R118KaGaaAa11AY.270.000065
ORF7a118R118del2AGa--a11AY.290.000016
ORF7a118R118IaGaaTa11AY.290.000016
ORF7a118R118KaGaaAa11AY.30.00001
ORF7a118R118IaGaaTa11AY.3.10.000085
ORF7a118R118IaGaaTa11AY.320.000532
ORF7a118R118XAgaTga11AY.320.000532
ORF7a118R118IaGaaTa11AY.330.000067
ORF7a118R118delAGA---11AY.340.000097
ORF7a118R118IaGaaTa11AY.340.000097
ORF7a118R118GAgaGga11AY.340.000097
ORF7a118R118del1AgA-gG11AY.360.000148
ORF7a118R118delAGA---11AY.370.000316
ORF7a118R118GAgaGga11AY.370.000316
ORF7a118R118SagAagT11AY.390.000025
ORF7a118R118RAgaCga11AY.390.000025
ORF7a118R118XAgaTga11AY.390.000025
ORF7a118R118KaGaaAa11AY.39.10.00004
ORF7a118R118KaGaaAa11AY.4.20.000022
ORF7a118R118TaGaaCa11AY.4.20.000022
ORF7a118R118RagAagG11AY.4.2.10.000149
ORF7a118R118IaGaaTa11AY.4.2.10.000149
ORF7a118R118XAgaTga11AY.410.000294
ORF7a118R118TaGaaCa11AY.430.000004
ORF7a118R118XAgaTga11AY.440.000006
ORF7a118R118KaGaaAa11AY.450.000122
ORF7a118R118delAGA---11AY.450.000122
ORF7a118R118IaGaaTa11AY.460.000104
ORF7a118R118IaGaaTa11AY.470.000031
ORF7a118R118delAGA---11AY.50.000021
ORF7a118R118SagAagC11AY.50.000021
ORF7a118R118delAGA---11AY.5.30.000337
ORF7a118R118SagAagC11AY.60.000041
ORF7a118R118XAgaTga11AY.60.000041
ORF7a118R118IaGaaTa11AY.60.000041
ORF7a118R118GAgaGga11AY.600.000938
ORF7a118R118delAGA---11AY.600.000938
ORF7a118R118KaGaaAa11AY.670.000464
ORF7a118R118IaGaaTa11AY.70.000196
ORF7a118R118XAgaTga11AY.7.20.000559
ORF7a118R118GAgaGga11AY.7.20.000559
ORF7a118R118IaGaaTa11AY.740.000116
ORF7a118R118GAgaGga11AY.740.000116
ORF7a118R118delAGA---11AY.750.000056
ORF7a118R118KaGaaAa11AY.750.000056
ORF7a118R118GAgaGga11AY.750.000056
ORF7a118R118del2AGa--a11AY.750.000056
ORF7a118R118TaGAaCT11AY.750.000056
ORF7a118R118IaGaaTa11AY.75.10.00018
ORF7a118R118GAgaGga11AY.75.10.00018
ORF7a118R118KaGaaAa11AY.770.001127
ORF7a118R118del2AGA--G11AY.790.001211
ORF7a118R118delAGA---11AY.870.000833
ORF7a118R118delAGA---11AY.9.10.000084
ORF7a118R118GAgaGga11AY.9.10.000084
ORF7a118R118KaGaaAa11AY.9.10.000084
ORF7a118R118IaGaaTa11AY.9.20.000037
ORF7a118R118GAgaGga11AY.9.20.000037
ORF7a118R118IaGaaTa11AY.940.000443
ORF7a118R118GAgaGga11AY.970.001701
ORF7a118R118delAGA---11AY.98.10.000048
ORF7a118R118KaGaaAa11AY.990.001049
ORF7a118R118delAGA---11AZ.20.000821
ORF7a118R118delAGA---11AZ.30.00152
ORF7a118R118delAGA---11B0.000128
ORF7a118R118del2AGa--a11B.10.000009
ORF7a118R118TaGaaCa11B.1.10.000018
ORF7a118R118XAgaTga11B.1.10.000018
ORF7a118R118IaGaaTa11B.1.1.1740.003378
ORF7a118R118KaGaaAa11B.1.1.1890.001513
ORF7a118R118del2AGa--a11B.1.1.2140.000055
ORF7a118R118KaGaaAa11B.1.1.2140.000055
ORF7a118R118IaGaaTa11B.1.1.2160.00089
ORF7a118R118XAgaTga11B.1.1.2250.007194
ORF7a118R118delAGA---11B.1.1.2310.003096
ORF7a118R118TaGaaCa11B.1.1.2340.012048
ORF7a118R118delAGA---11B.1.1.2650.003155
ORF7a118R118IaGaaTa11B.1.1.280.000311
ORF7a118R118delAGA---11B.1.1.2800.003086
ORF7a118R118KaGaaAa11B.1.1.2820.011628
ORF7a118R118GAgaGga11B.1.1.2910.000742
ORF7a118R118IaGaaTa11B.1.1.3020.002075
ORF7a118R118IaGaaTa11B.1.1.3060.000438
ORF7a118R118IaGaaTa11B.1.1.3080.011765
ORF7a118R118delAGA---11B.1.1.3120.001912
ORF7a118R118delAGA---11B.1.1.3310.011628
ORF7a118R118GAgaGga11B.1.1.3370.003597
ORF7a118R118TaGaaCa11B.1.1.3480.000796
ORF7a118R118IaGaaTa11B.1.1.3720.000689
ORF7a118R118RagAagG11B.1.1.390.00051
ORF7a118R118delAGA---11B.1.1.4110.014706
ORF7a118R118LAGACTC11B.1.1.4200.001006
ORF7a118R118delAGA---11B.1.1.4370.010417
ORF7a118R118GAgaGga11B.1.1.5250.005464
ORF7a118R118MaGAaTG11B.1.1.70.000001
ORF7a118R118LAGaCTa11B.1.1.70.000001
ORF7a118R118EAGaGAa11B.1.1.70.000001
ORF7a118R118TaGaaCa11B.1.1.700.000341
ORF7a118R118delAGA---11B.1.1.700.000341
ORF7a118R118SagAagT11B.1.1.990.02381
ORF7a118R118delAGA---11B.1.110.30.000718
ORF7a118R118RagAagG11B.1.1600.000031
ORF7a118R118XAgaTga11B.1.1600.000031
ORF7a118R118IaGaaTa11B.1.1620.005025
ORF7a118R118GAgaGga11B.1.1770.000013
ORF7a118R118TaGaaCa11B.1.177.120.000152
ORF7a118R118SagAagC11B.1.177.120.000152
ORF7a118R118delAGA---11B.1.177.210.000076
ORF7a118R118IaGaaTa11B.1.177.330.001645
ORF7a118R118delAGA---11B.1.177.440.000519
ORF7a118R118GAgaGga11B.1.177.440.000519
ORF7a118R118KaGaaAa11B.1.177.460.000918
ORF7a118R118delAGA---11B.1.177.500.004695
ORF7a118R118del2AGa--a11B.1.177.730.000566
ORF7a118R118GAgaGga11B.1.177.730.000566
ORF7a118R118delAGA---11B.1.177.800.001912
ORF7a118R118IaGaaTa11B.1.1890.004292
ORF7a118R118XAgaTga11B.1.20.000009
ORF7a118R118EAGaGAa11B.1.20.000009
ORF7a118R118GAgaGga11B.1.20.000009
ORF7a118R118SagAagT11B.1.20.000009
ORF7a118R118delAGA---11B.1.214.20.0006
ORF7a118R118del1Aga-ga11B.1.2210.000071
ORF7a118R118IaGaaTa11B.1.2230.002778
ORF7a118R118KaGaaAa11B.1.230.006061
ORF7a118R118RAgaCga11B.1.2340.000132
ORF7a118R118QAGaCAa11B.1.2340.000132
ORF7a118R118delAGA---11B.1.2350.002519
ORF7a118R118GAgaGga11B.1.2430.00007
ORF7a118R118IaGaaTa11B.1.258.170.000104
ORF7a118R118GAgaGga11B.1.258.170.000104
ORF7a118R118delAGA---11B.1.2650.001271
ORF7a118R118KaGaaAa11B.1.3460.001311
ORF7a118R118KaGaaAa11B.1.360.000146
ORF7a118R118del1agAag-11B.1.360.000146
ORF7a118R118IaGaaTa11B.1.36.160.001425
ORF7a118R118GAgaGga11B.1.36.80.001
ORF7a118R118delAGA---11B.1.3620.001541
ORF7a118R118delAGA---11B.1.3710.001122
ORF7a118R118GAgaGga11B.1.3960.000706
ORF7a118R118DAGAGAC11B.1.4160.001269
ORF7a118R118del2AGA--N11B.1.4270.00005
ORF7a118R118SagAagT11B.1.4270.00005
ORF7a118R118RAgaCga11B.1.4270.00005
ORF7a118R118XAgaTga11B.1.4290.000024
ORF7a118R118IaGaaTa11B.1.4320.011236
ORF7a118R118KaGaaAa11B.1.4380.006536
ORF7a118R118delAGA---11B.1.4590.004082
ORF7a118R118delAGA---11B.1.4680.005714
ORF7a118R118delAGA---11B.1.4700.001404
ORF7a118R118delAGA---11B.1.5030.002488
ORF7a118R118delAGA---11B.1.5170.000427
ORF7a118R118KaGaaAa11B.1.5260.000024
ORF7a118R118delAGA---11B.1.5270.003704
ORF7a118R118RAgaCga11B.1.5580.004566
ORF7a118R118KaGaaAa11B.1.5670.003333
ORF7a118R118KaGaaAa11B.1.575.10.002439
ORF7a118R118KaGaaAa11B.1.5960.000087
ORF7a118R118KaGaaAa11B.1.6060.006024
ORF7a118R118del2AGa--a11B.1.617.20.000004
ORF7a118R118WAgATgG11B.1.617.20.000004
ORF7a118R118EAGaGAa11B.1.617.30.002985
ORF7a118R118del2aGAa--11B.1.621.10.000506
ORF7a118R118XAgaTga11B.1.621.10.000506
ORF7a118R118delAGA---11B.1.6300.005236
ORF7a118R118NaGAaAC11B.1.6370.000073
ORF7a118R118IaGaaTa11B.1.6370.000073
ORF7a118R118delAGA---11B.1.6370.000073
ORF7a118R118delAGA---11B.120.00641
ORF7a118R118KaGaaAa11B.400.000364
ORF7a118R118RagAagG11B.6.60.000889
ORF7a118R118SagAagT11C.160.00106
ORF7a118R118KaGaaAa11C.370.000116
ORF7a118R118SagAagC11C.370.000116
ORF7a118R118RagAagG11C.370.000116
ORF7a118R118IaGaaTa11C.37.10.002618
ORF7a118R118KaGAaAG11C.390.018868
ORF7a118R118GAgaGga11D.20.000075
ORF7a118R118XAgaTga11D.20.000075
ORF7a118R118delAGA---11N.50.001767
ORF7a118R118GAgaGga11P.10.000016
ORF7a118R118RagAagG11P.10.000016
ORF7a118R118XAgaTga11P.10.000016
ORF7a118R118del2AGa--a11P.10.000016
ORF7a118R118delAGA---11P.1.10.000318
ORF7a118R118GAgaGga11P.1.100.000269
ORF7a118R118IaGaaTa11P.1.120.000484
ORF7a118R118delAGA---11P.1.120.000484
ORF7a118R118KaGaaAa11P.1.140.000048
ORF7a118R118SagAagT11P.1.140.000048
ORF7a118R118IaGaaTa11P.1.150.000232
ORF7a118R118delAGA---11P.1.160.000374
ORF7a118R118delAGA---11P.1.170.000162
ORF7a118R118IaGaaTa11P.1.170.000162
ORF7a118R118delAGA---11P.1.70.000319
ORF7a118R118del2aGAa--11P.20.000187
ORF7a118R118GAgaGga11P.20.000187
ORF7a118R118RagAagG11P.40.003802
ORF7a118R118IaGaaTa11P.70.004367
ORF7a118R118delAGA---11Q.10.000126
ORF7a118R118TaGaaCa11Q.10.000126
ORF7a118R118IaGaaTa11Q.10.000126
ORF7a118R118IaGaaTa11Q.40.000455
ORF7a118R118XAgaTga11Q.40.000455
ORF7a118R118IaGaaTa11Q.80.000165
ORF7a118R118del2AGa--a11Q.80.000165
ORF7a118R118del1agAag-11Q.80.000165