CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 116 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a116L116LsynctCctA84002150.025595227739-27741

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a116L116LctCctA2158400All0.000041
ORF7a116L116LctCctA182598B.1.1.70.000016
ORF7a116L116LctCctA147539AY.40.000229
ORF7a116L116LctCctA5478B.1.20.000044
ORF7a116L116LctCctA9367B.1.617.20.000034
ORF7a116L116LctCctA1300AY.440.000006
ORF7a116L116LctCctA5290B.10.000046
ORF7a116L116LctCctA1158AY.430.000004
ORF7a116L116LctCctA1145P.10.000016
ORF7a116L116LctCctA5135AY.250.00003
ORF7a116L116LctCctA186AY.200.000039
ORF7a116L116LctCctA255B.1.2430.000139
ORF7a116L116LctCctA229AY.1170.000169
ORF7a116L116LctCctA128AY.1020.000027
ORF7a116L116LctCctA115AY.1000.000046
ORF7a116L116LctCctA314B.1.5610.001191
ORF7a116L116LctCctA112AY.1200.000037
ORF7a116L116LctCctA19B.1.2580.000067
ORF7a116L116LctCctA18D.20.000075
ORF7a116L116LctCctA16AY.750.000056
ORF7a116L116LctCctA15AY.60.000041
ORF7a116L116LctCctA35B.1.258.170.000312
ORF7a116L116LctCctA22AE.10.022727
ORF7a116L116LctCctA12B.6.60.000889
ORF7a116L116LctCctA11B.1.177.850.005435
ORF7a116L116LctCctA11B.1.4000.000429