CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 116 & Codon = cCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a116L116PnonsyncTccCc2282260.99122827739-27741

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a116L116PcTccCc226228All0.000043
ORF7a116L116PcTccCc3838AY.40.000059
ORF7a116L116PcTccCc2425AY.1030.000149
ORF7a116L116PcTccCc2222B.1.6280.007752
ORF7a116L116PcTccCc1616AY.200.000622
ORF7a116L116PcTccCc1313B.1.617.20.000049
ORF7a116L116PcTccCc1212AY.1130.001709
ORF7a116L116PcTccCc1112AY.30.000109
ORF7a116L116PcTccCc1212B.1.3510.000357
ORF7a116L116PcTccCc99B.1.1.2840.000967
ORF7a116L116PcTccCc88AY.250.000048
ORF7a116L116PcTccCc88B.1.1.70.000007
ORF7a116L116PcTccCc66AY.290.000095
ORF7a116L116PcTccCc66B.1.20.000053
ORF7a116L116PcTccCc44AY.450.000487
ORF7a116L116PcTccCc44B.10.000037
ORF7a116L116PcTccCc33AY.50.000062
ORF7a116L116PcTccCc33B.1.1.10.00098
ORF7a116L116PcTccCc22A.2.50.000998
ORF7a116L116PcTccCc22AE.80.000978
ORF7a116L116PcTccCc22AY.260.000057
ORF7a116L116PcTccCc22AY.610.00021
ORF7a116L116PcTccCc22AY.980.000158
ORF7a116L116PcTccCc22B.1.10.000036
ORF7a116L116PcTccCc11A0.000387
ORF7a116L116PcTccCc11A.10.000282
ORF7a116L116PcTccCc11AY.1000.000046
ORF7a116L116PcTccCc11AY.1020.000027
ORF7a116L116PcTccCc11AY.110.001339
ORF7a116L116PcTccCc11AY.1190.000035
ORF7a116L116PcTccCc11AY.390.000025
ORF7a116L116PcTccCc11AY.430.000004
ORF7a116L116PcTccCc11AY.440.000006
ORF7a116L116PcTccCc11B.1.2340.000132
ORF7a116L116PcTccCc11B.1.4290.000024
ORF7a116L116PcTccCc11B.1.4590.004082
ORF7a116L116PcTccCc11D.20.000075
ORF7a116L116PcTccCc11P.10.000016
ORF7a116L116PcTccCc11P.1.60.001946