CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 116 & Codon = Ttc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF7a	116	L116F		nonsyn	Ctc	Ttc	75715	75670	0.999406	27739-27741

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF7a	116	L116F	Ctc	Ttc	75670	75715	All	0.014473
ORF7a	116	L116F	Ctc	Ttc	17865	17875	B.1.617.2	0.067269
ORF7a	116	L116F	Ctc	Ttc	12445	12456	B.1.526	0.292514
ORF7a	116	L116F	Ctc	Ttc	10720	10722	AY.14	0.943496
ORF7a	116	L116F	Ctc	Ttc	9244	9253	AY.54	0.881388
ORF7a	116	L116F	Ctc	Ttc	5248	5249	AY.13	0.844816
ORF7a	116	L116F	Ctc	Ttc	3045	3045	AY.53	0.875503
ORF7a	116	L116F	Ctc	Ttc	2392	2394	AY.30	0.946577
ORF7a	116	L116F	Ctc	Ttc	2165	2166	AY.16	0.821944
ORF7a	116	L116F	Ctc	Ttc	1603	1604	AY.8	0.971515
ORF7a	116	L116F	Ctc	Ttc	1163	1163	AY.50	0.929656
ORF7a	116	L116F	Ctc	Ttc	1022	1022	AY.51	0.929091
ORF7a	116	L116F	Ctc	Ttc	780	781	B.1.1.7	0.000698
ORF7a	116	L116F	Ctc	Ttc	743	743	AY.40	0.71649
ORF7a	116	L116F	Ctc	Ttc	701	701	AY.52	0.570847
ORF7a	116	L116F	Ctc	Ttc	473	473	AY.16.1	0.222274
ORF7a	116	L116F	Ctc	Ttc	440	441	AY.15	0.977778
ORF7a	116	L116F	Ctc	Ttc	383	383	AY.44	0.002331
ORF7a	116	L116F	Ctc	Ttc	311	311	AY.43	0.001378
ORF7a	116	L116F	Ctc	Ttc	251	251	AY.19	0.286203
ORF7a	116	L116F	Ctc	Ttc	223	225	AY.26	0.006313
ORF7a	116	L116F	Ctc	Ttc	224	224	AY.49	0.715655
ORF7a	116	L116F	Ctc	Ttc	198	198	AY.3	0.001969
ORF7a	116	L116F	Ctc	Ttc	197	197	AY.4	0.000307
ORF7a	116	L116F	Ctc	Ttc	170	170	AY.48	0.07907
ORF7a	116	L116F	Ctc	Ttc	169	169	B.1	0.001548
ORF7a	116	L116F	Ctc	Ttc	140	140	B.1.160	0.004366
ORF7a	116	L116F	Ctc	Ttc	133	133	AY.38	0.0664
ORF7a	116	L116F	Ctc	Ttc	126	126	AY.29	0.001987
ORF7a	116	L116F	Ctc	Ttc	119	119	AY.62	0.051852
ORF7a	116	L116F	Ctc	Ttc	117	118	B.1.2	0.00103
ORF7a	116	L116F	Ctc	Ttc	107	107	B.1.1.317	0.044051
ORF7a	116	L116F	Ctc	Ttc	98	98	AY.18	0.989899
ORF7a	116	L116F	Ctc	Ttc	95	95	AY.98	0.007505
ORF7a	116	L116F	Ctc	Ttc	89	89	AY.55	0.081651
ORF7a	116	L116F	Ctc	Ttc	87	87	AY.17	0.713115
ORF7a	116	L116F	Ctc	Ttc	82	82	AY.25	0.000493
ORF7a	116	L116F	Ctc	Ttc	82	82	AY.67	0.038069
ORF7a	116	L116F	Ctc	Ttc	79	79	B.1.177	0.00104
ORF7a	116	L116F	Ctc	Ttc	77	77	AY.75	0.004314
ORF7a	116	L116F	Ctc	Ttc	70	70	AY.102	0.001856
ORF7a	116	L116F	Ctc	Ttc	66	66	AY.103	0.00041
ORF7a	116	L116F	Ctc	Ttc	52	52	AY.31	0.962963
ORF7a	116	L116F	Ctc	Ttc	52	52	AY.61	0.005448
ORF7a	116	L116F	Ctc	Ttc	50	50	AY.64	0.029762
ORF7a	116	L116F	Ctc	Ttc	47	47	AY.56	0.075441
ORF7a	116	L116F	Ctc	Ttc	45	45	AY.105	0.028939
ORF7a	116	L116F	Ctc	Ttc	40	40	AY.119	0.001412
ORF7a	116	L116F	Ctc	Ttc	39	39	AY.10	0.020668
ORF7a	116	L116F	Ctc	Ttc	39	39	AY.4.3	0.032828
ORF7a	116	L116F	Ctc	Ttc	38	38	B.1.1	0.000689
ORF7a	116	L116F	Ctc	Ttc	36	36	P.1	0.000567
ORF7a	116	L116F	Ctc	Ttc	35	35	AY.33	0.002337
ORF7a	116	L116F	Ctc	Ttc	35	35	AY.46	0.003643
ORF7a	116	L116F	Ctc	Ttc	34	34	AY.75.1	0.006131
ORF7a	116	L116F	Ctc	Ttc	33	33	AY.117	0.002789
ORF7a	116	L116F	Ctc	Ttc	33	33	AY.85	0.014097
ORF7a	116	L116F	Ctc	Ttc	32	32	B.1.429	0.000753
ORF7a	116	L116F	Ctc	Ttc	31	31	AE.3	1
ORF7a	116	L116F	Ctc	Ttc	31	31	B.1.621	0.002744
ORF7a	116	L116F	Ctc	Ttc	30	30	AY.47	0.000933
ORF7a	116	L116F	Ctc	Ttc	30	30	AY.59	0.01589
ORF7a	116	L116F	Ctc	Ttc	30	30	AY.7.1	0.003381
ORF7a	116	L116F	Ctc	Ttc	29	29	AY.37	0.009166
ORF7a	116	L116F	Ctc	Ttc	29	29	AY.42	0.001167
ORF7a	116	L116F	Ctc	Ttc	29	29	AY.70	0.006047
ORF7a	116	L116F	Ctc	Ttc	29	29	AY.9.2	0.001065
ORF7a	116	L116F	Ctc	Ttc	26	26	AY.39	0.000642
ORF7a	116	L116F	Ctc	Ttc	26	26	AY.45	0.003164
ORF7a	116	L116F	Ctc	Ttc	25	25	AY.99.2	0.002304
ORF7a	116	L116F	Ctc	Ttc	23	23	AY.86	0.019087
ORF7a	116	L116F	Ctc	Ttc	22	22	B.1.214	0.080586
ORF7a	116	L116F	Ctc	Ttc	21	21	AY.58	0.019056
ORF7a	116	L116F	Ctc	Ttc	20	21	B.1.596	0.001743
ORF7a	116	L116F	Ctc	Ttc	18	18	AY.35	0.004195
ORF7a	116	L116F	Ctc	Ttc	18	18	AY.5.4	0.004981
ORF7a	116	L116F	Ctc	Ttc	18	18	AY.78	0.027735
ORF7a	116	L116F	Ctc	Ttc	18	18	AY.98.1	0.000872
ORF7a	116	L116F	Ctc	Ttc	17	17	AY.68	0.004654
ORF7a	116	L116F	Ctc	Ttc	17	17	AY.92	0.004884
ORF7a	116	L116F	Ctc	Ttc	16	16	AY.110	0.001803
ORF7a	116	L116F	Ctc	Ttc	16	16	AY.73	0.010645
ORF7a	116	L116F	Ctc	Ttc	15	15	AZ.1	0.01301
ORF7a	116	L116F	Ctc	Ttc	14	15	B.1.351	0.000416
ORF7a	116	L116F	Ctc	Ttc	14	14	AY.20	0.000544
ORF7a	116	L116F	Ctc	Ttc	14	14	AY.9	0.000946
ORF7a	116	L116F	Ctc	Ttc	13	13	AY.23	0.000907
ORF7a	116	L116F	Ctc	Ttc	13	13	AY.24	0.005603
ORF7a	116	L116F	Ctc	Ttc	13	13	AY.28	0.024575
ORF7a	116	L116F	Ctc	Ttc	13	13	AY.41	0.003821
ORF7a	116	L116F	Ctc	Ttc	13	13	AY.69	0.002427
ORF7a	116	L116F	Ctc	Ttc	13	13	AY.79	0.015738
ORF7a	116	L116F	Ctc	Ttc	13	13	B.1.311	0.003569
ORF7a	116	L116F	Ctc	Ttc	12	12	AY.21	0.02277
ORF7a	116	L116F	Ctc	Ttc	11	11	AY.100	0.000506
ORF7a	116	L116F	Ctc	Ttc	11	11	AY.39.1	0.000436
ORF7a	116	L116F	Ctc	Ttc	11	11	AY.4.2	0.000239
ORF7a	116	L116F	Ctc	Ttc	11	11	B.1.1.369	0.004909
ORF7a	116	L116F	Ctc	Ttc	11	11	B.1.377	0.050228
ORF7a	116	L116F	Ctc	Ttc	10	10	AY.9.1	0.000837
ORF7a	116	L116F	Ctc	Ttc	10	10	B.1.1.519	0.000397
ORF7a	116	L116F	Ctc	Ttc	9	9	AY.65	0.004797
ORF7a	116	L116F	Ctc	Ttc	9	9	AY.77	0.010147
ORF7a	116	L116F	Ctc	Ttc	9	9	AZ.2	0.007389
ORF7a	116	L116F	Ctc	Ttc	9	9	B.1.36	0.001313
ORF7a	116	L116F	Ctc	Ttc	9	9	B.1.437	0.1875
ORF7a	116	L116F	Ctc	Ttc	9	9	B.1.617.1	0.001161
ORF7a	116	L116F	Ctc	Ttc	8	8	AY.114	0.001849
ORF7a	116	L116F	Ctc	Ttc	8	8	AY.120	0.000297
ORF7a	116	L116F	Ctc	Ttc	8	8	AY.46.2	0.005083
ORF7a	116	L116F	Ctc	Ttc	8	8	AY.84	0.0035
ORF7a	116	L116F	Ctc	Ttc	7	7	A.1	0.001973
ORF7a	116	L116F	Ctc	Ttc	7	7	AY.106	0.002344
ORF7a	116	L116F	Ctc	Ttc	7	7	AY.121	0.000947
ORF7a	116	L116F	Ctc	Ttc	7	7	AY.71	0.003325
ORF7a	116	L116F	Ctc	Ttc	7	7	AY.93	0.001912
ORF7a	116	L116F	Ctc	Ttc	7	7	B.1.243	0.000487
ORF7a	116	L116F	Ctc	Ttc	7	7	B.1.635	0.122807
ORF7a	116	L116F	Ctc	Ttc	6	6	AY.60	0.005629
ORF7a	116	L116F	Ctc	Ttc	6	6	AY.7.2	0.003356
ORF7a	116	L116F	Ctc	Ttc	6	6	AY.88	0.005305
ORF7a	116	L116F	Ctc	Ttc	6	6	B.1.221.4	0.025
ORF7a	116	L116F	Ctc	Ttc	6	6	B.1.623	0.003219
ORF7a	116	L116F	Ctc	Ttc	6	6	P.1.14	0.000287
ORF7a	116	L116F	Ctc	Ttc	5	5	A	0.001935
ORF7a	116	L116F	Ctc	Ttc	5	5	AY.116	0.001434
ORF7a	116	L116F	Ctc	Ttc	5	5	AY.46.4	0.000823
ORF7a	116	L116F	Ctc	Ttc	5	5	AY.5	0.000103
ORF7a	116	L116F	Ctc	Ttc	5	5	AY.74	0.000578
ORF7a	116	L116F	Ctc	Ttc	5	5	AY.87	0.004163
ORF7a	116	L116F	Ctc	Ttc	5	5	B.1.1.1	0.001633
ORF7a	116	L116F	Ctc	Ttc	5	5	B.1.1.312	0.00956
ORF7a	116	L116F	Ctc	Ttc	5	5	B.1.177.73	0.002831
ORF7a	116	L116F	Ctc	Ttc	5	5	B.1.258	0.000333
ORF7a	116	L116F	Ctc	Ttc	5	5	B.1.258.17	0.00052
ORF7a	116	L116F	Ctc	Ttc	5	5	B.1.618	0.020161
ORF7a	116	L116F	Ctc	Ttc	5	5	C.37	0.00058
ORF7a	116	L116F	Ctc	Ttc	5	5	P.2	0.000933
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.1	0.001583
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.101	0.001962
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.113	0.00057
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.12	0.001264
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.32	0.00213
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.34	0.000388
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.4.2.1	0.000596
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.46.6	0.000289
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.72	0.005442
ORF7a	116	L116F	Ctc	Ttc	4	4	AY.81	0.007968
ORF7a	116	L116F	Ctc	Ttc	4	4	B.1.234	0.000528
ORF7a	116	L116F	Ctc	Ttc	3	3	A.2.5	0.001497
ORF7a	116	L116F	Ctc	Ttc	3	3	A.23.1	0.002113
ORF7a	116	L116F	Ctc	Ttc	3	3	AY.104	0.005952
ORF7a	116	L116F	Ctc	Ttc	3	3	AY.118	0.000188
ORF7a	116	L116F	Ctc	Ttc	3	3	AY.6	0.000123
ORF7a	116	L116F	Ctc	Ttc	3	3	AY.94	0.001328
ORF7a	116	L116F	Ctc	Ttc	3	3	AY.95	0.002283
ORF7a	116	L116F	Ctc	Ttc	3	3	AY.99.1	0.004658
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.1.222	0.000612
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.1.284	0.000322
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.177.57	0.000843
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.36.31	0.005254
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.361	0.003866
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.375	0.002459
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.427	0.000151
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.466.2	0.001174
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.525	0.000339
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.565	0.002431
ORF7a	116	L116F	Ctc	Ttc	3	3	B.1.634	0.010274
ORF7a	116	L116F	Ctc	Ttc	3	3	P.1.12	0.001452
ORF7a	116	L116F	Ctc	Ttc	3	3	P.1.15	0.000697
ORF7a	116	L116F	Ctc	Ttc	1	2		0.055556
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.109	0.001479
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.111	0.000366
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.120.1	0.000642
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.22	0.004184
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.36	0.000296
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.46.1	0.002053
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.63	0.000774
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.7	0.000392
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.80	0.002257
ORF7a	116	L116F	Ctc	Ttc	2	2	AY.91	0.001461
ORF7a	116	L116F	Ctc	Ttc	2	2	B	0.000256
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.1.176	0.000879
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.1.263	0.003115
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.1.28	0.000622
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.1.370	0.025316
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.160.16	0.001859
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.177.4	0.000422
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.177.77	0.001452
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.177.81	0.000379
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.240	0.000431
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.320	0.002491
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.36.8	0.002
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.561	0.000794
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.589	0.015152
ORF7a	116	L116F	Ctc	Ttc	2	2	B.1.637	0.000146
ORF7a	116	L116F	Ctc	Ttc	2	2	D.2	0.00015
ORF7a	116	L116F	Ctc	Ttc	2	2	P.1.17	0.000324
ORF7a	116	L116F	Ctc	Ttc	2	2	P.1.7	0.000639
ORF7a	116	L116F	Ctc	Ttc	2	2	Q.8	0.00033
ORF7a	116	L116F	Ctc	Ttc	2	2	R.1	0.00018
ORF7a	116	L116F	Ctc	Ttc	1	1	A.2.4	0.003367
ORF7a	116	L116F	Ctc	Ttc	1	1	AE.1	0.011364
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.107	0.000466
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.108	0.001103
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.11	0.001339
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.120.2	0.001285
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.23.1	0.000417
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.27	0.000065
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.34.1	0.00051
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.4.5	0.000107
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.46.5	0.000198
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.66	0.00107
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.76	0.004831
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.82	0.001357
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.83	0.001724
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.90	0.000684
ORF7a	116	L116F	Ctc	Ttc	1	1	AY.97	0.001701
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.121	0.002427
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.214	0.000055
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.265	0.003155
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.273	0.006757
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.33	0.000421
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.372	0.000689
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.409	0.002833
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.448	0.002033
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.1.45	0.014085
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.111	0.001175
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.128	0.000635
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.143	0.021277
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.147	0.000756
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.157	0.002985
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.177.16	0.000664
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.177.53	0.002392
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.177.8	0.000752
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.184	0.058824
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.195	0.005025
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.210	0.002132
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.221	0.000071
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.232	0.000537
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.237	0.004975
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.258.10	0.011364
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.258.11	0.000396
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.279	0.000514
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.346	0.001311
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.36.27	0.000763
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.367	0.000792
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.409	0.000781
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.416	0.001269
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.426	0.001009
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.428	0.00102
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.438.1	0.000107
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.509	0.000866
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.530	0.007143
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.544	0.006024
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.564	0.000426
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.577	0.000687
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.580	0.004065
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.588	0.00091
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.590	0.004545
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.612	0.002653
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.619.1	0.000641
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.628	0.000352
ORF7a	116	L116F	Ctc	Ttc	1	1	B.1.93	0.000934
ORF7a	116	L116F	Ctc	Ttc	1	1	B.33	0.021277
ORF7a	116	L116F	Ctc	Ttc	1	1	B.56	0.028571
ORF7a	116	L116F	Ctc	Ttc	1	1	C.1	0.002392
ORF7a	116	L116F	Ctc	Ttc	1	1	C.30	0.001727
ORF7a	116	L116F	Ctc	Ttc	1	1	C.36.3	0.000567
ORF7a	116	L116F	Ctc	Ttc	1	1	P.1.17.1	0.000875
ORF7a	116	L116F	Ctc	Ttc	1	1	P.1.2	0.001156
ORF7a	116	L116F	Ctc	Ttc	1	1	Q.1	0.000126
ORF7a	116	L116F	Ctc	Ttc	1	1	Q.2	0.000613
ORF7a	116	L116F	Ctc	Ttc	1	1	Q.4	0.000455
ORF7a	116	L116F	Ctc	Ttc	1	1	Q.7	0.001111
ORF7a	116	L116F	Ctc	Ttc	1	1	W.4	0.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.