CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 116 & Codon = TtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a116L116FnonsynCtCTtT75715450.00059433427739-27741

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a116L116FCtCTtT4575715All0.000009
ORF7a116L116FCtCTtT1017875B.1.617.20.000038
ORF7a116L116FCtCTtT1112456B.1.5260.000259
ORF7a116L116FCtCTtT210722AY.140.000176
ORF7a116L116FCtCTtT99253AY.540.000858
ORF7a116L116FCtCTtT15249AY.130.000161
ORF7a116L116FCtCTtT22394AY.300.000791
ORF7a116L116FCtCTtT12166AY.160.00038
ORF7a116L116FCtCTtT11604AY.80.000606
ORF7a116L116FCtCTtT1781B.1.1.70.000001
ORF7a116L116FCtCTtT1441AY.150.002222
ORF7a116L116FCtCTtT2225AY.260.000057
ORF7a116L116FCtCTtT1118B.1.20.000009
ORF7a116L116FCtCTtT121B.1.5960.000087
ORF7a116L116FCtCTtT115B.1.3510.00003
ORF7a116L116FCtCTtT120.055556