CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 116 & Codon = -tc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a116L116del1delCtc-tc186360.19354827739-27741

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a116L116del1Ctc-tc36186All0.000007
ORF7a116L116del1Ctc-tc1881B.1.1.70.000016
ORF7a116L116del1Ctc-tc263AY.40.000003
ORF7a116L116del1Ctc-tc15AY.430.000004
ORF7a116L116del1Ctc-tc14B.1.617.20.000004
ORF7a116L116del1Ctc-tc13AY.250.000006
ORF7a116L116del1Ctc-tc23B.1.130.004751
ORF7a116L116del1Ctc-tc22B.1.617.10.000258
ORF7a116L116del1Ctc-tc11AY.160.00038
ORF7a116L116del1Ctc-tc11AY.240.000431
ORF7a116L116del1Ctc-tc11AY.280.00189
ORF7a116L116del1Ctc-tc11AY.290.000016
ORF7a116L116del1Ctc-tc11AY.4.20.000022
ORF7a116L116del1Ctc-tc11AY.9.20.000037
ORF7a116L116del1Ctc-tc11AY.99.20.000092
ORF7a116L116del1Ctc-tc11B.1.3060.005714
ORF7a116L116del1Ctc-tc11B.1.5260.000024