CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 110 & Codon = aCa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a110I110TnonsynaTaaCa327632750.99969527721-27723

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a110I110TaTaaCa32753276All0.000626
ORF7a110I110TaTaaCa24122412AY.40.003754
ORF7a110I110TaTaaCa9292B.1.1.70.000082
ORF7a110I110TaTaaCa8787B.1.258.170.009046
ORF7a110I110TaTaaCa8383B.1.617.20.000313
ORF7a110I110TaTaaCa6363B.1.1.2260.366279
ORF7a110I110TaTaaCa5555AY.46.40.009048
ORF7a110I110TaTaaCa4949C.350.037926
ORF7a110I110TaTaaCa4242AY.430.000186
ORF7a110I110TaTaaCa3333P.10.00052
ORF7a110I110TaTaaCa2727B.1.1.2220.005508
ORF7a110I110TaTaaCa2121AY.1000.000966
ORF7a110I110TaTaaCa2020B.10.000183
ORF7a110I110TaTaaCa2020B.1.1.5190.000794
ORF7a110I110TaTaaCa1818AY.1020.000477
ORF7a110I110TaTaaCa1313AY.30.000129
ORF7a110I110TaTaaCa1313B.1.20.000114
ORF7a110I110TaTaaCa1111AY.440.000067
ORF7a110I110TaTaaCa1010AY.250.00006
ORF7a110I110TaTaaCa1010AY.9.20.000367
ORF7a110I110TaTaaCa99B.1.1770.000119
ORF7a110I110TaTaaCa88AY.1030.00005
ORF7a110I110TaTaaCa88AY.99.10.012422
ORF7a110I110TaTaaCa77AY.420.000282
ORF7a110I110TaTaaCa66B.1.4290.000141
ORF7a110I110TaTaaCa66B.1.617.10.000774
ORF7a110I110TaTaaCa66B.1.6370.000438
ORF7a110I110TaTaaCa55AY.200.000194
ORF7a110I110TaTaaCa55AY.330.000334
ORF7a110I110TaTaaCa55AY.470.000156
ORF7a110I110TaTaaCa55AY.50.000103
ORF7a110I110TaTaaCa55B.1.3510.000149
ORF7a110I110TaTaaCa44A.10.001127
ORF7a110I110TaTaaCa44AY.1210.000541
ORF7a110I110TaTaaCa44AY.4.30.003367
ORF7a110I110TaTaaCa44B.1.10.000073
ORF7a110I110TaTaaCa44B.1.5260.000094
ORF7a110I110TaTaaCa33AY.1180.000188
ORF7a110I110TaTaaCa33AY.1200.000112
ORF7a110I110TaTaaCa33AY.290.000047
ORF7a110I110TaTaaCa33AY.39.10.000119
ORF7a110I110TaTaaCa33B.1.1.2140.000166
ORF7a110I110TaTaaCa33B.1.1.250.001706
ORF7a110I110TaTaaCa33B.1.177.600.000655
ORF7a110I110TaTaaCa33B.1.36.290.001552
ORF7a110I110TaTaaCa33C.370.000348
ORF7a110I110TaTaaCa22AY.1190.000071
ORF7a110I110TaTaaCa22AY.460.000208
ORF7a110I110TaTaaCa22AY.620.000871
ORF7a110I110TaTaaCa22AY.690.000373
ORF7a110I110TaTaaCa22AY.75.10.000361
ORF7a110I110TaTaaCa22AY.770.002255
ORF7a110I110TaTaaCa22B.1.1.3970.004505
ORF7a110I110TaTaaCa22B.1.160.80.002577
ORF7a110I110TaTaaCa22B.1.2430.000139
ORF7a110I110TaTaaCa22B.1.360.000292
ORF7a110I110TaTaaCa22B.1.36.220.002415
ORF7a110I110TaTaaCa22B.1.36.310.003503
ORF7a110I110TaTaaCa22B.1.3610.002577
ORF7a110I110TaTaaCa22B.1.466.20.000782
ORF7a110I110TaTaaCa22P.1.140.000096
ORF7a110I110TaTaaCa11AM.40.003571
ORF7a110I110TaTaaCa11AY.1070.000466
ORF7a110I110TaTaaCa11AY.1130.000142
ORF7a110I110TaTaaCa11AY.1160.000287
ORF7a110I110TaTaaCa11AY.240.000431
ORF7a110I110TaTaaCa11AY.3.10.000085
ORF7a110I110TaTaaCa11AY.300.000396
ORF7a110I110TaTaaCa11AY.390.000025
ORF7a110I110TaTaaCa11AY.4.2.10.000149
ORF7a110I110TaTaaCa11AY.4.50.000107
ORF7a110I110TaTaaCa11AY.46.10.001027
ORF7a110I110TaTaaCa11AY.480.000465
ORF7a110I110TaTaaCa11AY.610.000105
ORF7a110I110TaTaaCa11AY.840.000437
ORF7a110I110TaTaaCa11B0.000128
ORF7a110I110TaTaaCa11B.1.1.2770.000759
ORF7a110I110TaTaaCa11B.1.1.2790.001121
ORF7a110I110TaTaaCa11B.1.1.3030.002762
ORF7a110I110TaTaaCa11B.1.1.3180.000302
ORF7a110I110TaTaaCa11B.1.1.3490.010309
ORF7a110I110TaTaaCa11B.1.1.5170.006803
ORF7a110I110TaTaaCa11B.1.1.5260.003546
ORF7a110I110TaTaaCa11B.1.1110.001175
ORF7a110I110TaTaaCa11B.1.1600.000031
ORF7a110I110TaTaaCa11B.1.177.690.001484
ORF7a110I110TaTaaCa11B.1.2100.002132
ORF7a110I110TaTaaCa11B.1.2340.000132
ORF7a110I110TaTaaCa11B.1.258.110.000396
ORF7a110I110TaTaaCa11B.1.2980.002114
ORF7a110I110TaTaaCa11B.1.3350.010309
ORF7a110I110TaTaaCa11B.1.4130.004255
ORF7a110I110TaTaaCa11B.1.4480.002625
ORF7a110I110TaTaaCa11B.1.5230.002451
ORF7a110I110TaTaaCa11B.1.5950.000261
ORF7a110I110TaTaaCa11B.1.5960.000087
ORF7a110I110TaTaaCa11B.1.6090.000479
ORF7a110I110TaTaaCa11B.1.6210.000089
ORF7a110I110TaTaaCa11B.400.000364
ORF7a110I110TaTaaCa11D.20.000075
ORF7a110I110TaTaaCa11P.1.120.000484
ORF7a110I110TaTaaCa11Q.10.000126
ORF7a110I110TaTaaCa11Q.40.000455
ORF7a110I110TaTaaCa11Q.80.000165
ORF7a110I110TaTaaCa11R.10.00009